Array 1 93271-94230 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGWP010000246.1 Limosilactobacillus reuteri strain 4A scaffold246, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 93271 36 100.0 30 .................................... TCGCTGGGAATTTTTATTTGGAGGTGACAA 93337 36 100.0 30 .................................... AATTGATGTCGAGTGGATTAACGCTGTCTA 93403 36 100.0 30 .................................... CTGTCGGTTTACAAAAGCTAAATGACAACA 93469 36 100.0 30 .................................... ACCTGATACCAATAAGCTCTAGGGTCATAA 93535 36 100.0 30 .................................... AAGCGCCTGGAATTGCAGCTCTTGTGATAC 93601 36 100.0 30 .................................... AAGAAGCCCACCGTTAACTGCTGAATGTTA 93667 36 100.0 30 .................................... TCATCATAGAGTTTAGTTAACTTGTAATCA 93733 36 100.0 30 .................................... TCTTACAAATTGGATTAGATGAATTAACTT 93799 36 100.0 30 .................................... TTTCGTACGTATGTTCTTTATAATGTCTTT 93865 36 100.0 30 .................................... GGTCAAAAAAATACGGTTTAAGCGACGTTT 93931 36 100.0 30 .................................... TAATCGGTTCTGCGATTCCACTTGGTGATG 93997 36 100.0 30 .................................... ACCCATCGTTCCATACCCTAGAACATTACC 94063 36 100.0 30 .................................... TCGTCTACTTCTTCAGCAGCCGCATTGCGA 94129 36 100.0 30 .................................... GTGGTTATTGTGGTTCAACTTTAGCAATCA 94195 36 88.9 0 ...............T........G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.3 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACGGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TTACACGTAAACTATAACAATCACAACGATGATATTTTTTGATATCCTCCATCACGTTTTCCCCGCCAAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGGAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAGCCACAAGAAAAATTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTGAAGAACAACTACAAGATGAATATTTTACGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAAGCTGGGGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //