Array 1 144411-144142 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYWS010000005.1 Pseudomonas syringae strain CFBP8777 CFBP877705, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 144410 28 100.0 32 ............................ AGGATGAACCCCCAGTTGCAGTTGCTAGCTCA 144350 28 100.0 32 ............................ AACTGCAGGCAATGGTTTCGGATCGGTCCACA 144290 28 100.0 32 ............................ TCATGCGGATAATCATCCAACTGAGGACACCC 144230 28 96.4 33 ...............C............ ATGAAGTCGCAGCGAGCAGGGCCGCAAGCAAAA 144169 28 75.0 0 ..C........C.C........T..GGG | ========== ====== ====== ====== ============================ ================================= ================== 5 28 94.3 32 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : GTTTGACGTCGTAACGCACCCCGGTGACCTTTACACCCTGTGCGCGGCACGGCTCGCTTGAGCACAGAAATTCGAAGCGGGTGCGGGGTGGTTCCTGTGAAAAGTATTCACGCCGCGCAGCGACAATCGACAGCTCCTGCTGCAGTTCGACACAAAAGGCGCGGGTGATGGGCTTTGTGGGTTTCATACGATACATCCCTGATGCCGTGTGCGTTGACAGCTTACTGGTTCTCGATATGGGACAAGTGATTTCAAGAGATGATGCATTGAGAGCGAGGGGAGGATAGGCGTTTGATTACCGGTGCCTGTATCAGGCGTCTTGGGCCTCTGGAGTAAGTGGGTTGGTCAACGGCATTTTTGGCGGGTAAGACCCTCTTTTTTGGGATGAAAGCTTGGCCTATATAAATCAAAGGGTTAGGCGTGTAACAGAAAAAAGGGTTAATTAGATGAAAAGGAGTATTTTTTCTTTTAAAACGAGAGGTTGTCGAGCAAAGTGTCTA # Right flank : GGGCCGACCGGATGAAGGTGGCAGCGTATGAAGCAATATTCATACACCGCCCCATCCGTTACTGAATCACACCGCATGCCGCCCGATCGCCGCCACCGCCCAAGGGTTTGGGGTGGTCCGAGTGGTTATCGCCGCCTGCATGAATCATCAGTGCGTGTCCCTTGATTTGCGAAAGCTCTTTAATGCGGGGTGCCAGCACCGGGTAATCGGCCGTGCCGTCTGCGTTCACGTAGATTGCTGGCAAGTCGCCCAAGTGGCCGTCCTTGTCATAAGGTCCCAGATGCTTTCCGGTCTTCTCTGGATCGAAGTGACCGCCTGCCGCCAGGGCGGCGACCTTGACGCCGTCCTTCACACCCGCATCGCAGCTGCCTTTTTCATGTACATGAAAGCCATGCACACCCGCTGGCAGGTCGGTCAGTTTCGGGGTGAAAAGCAGGCCGTAATCGGTTTCTTCGATATGCACGCTGCCAATCGGTTTTGGCGCGCCGTCGGCACTCACC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //