Array 1 47911-47577 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATWL01000003.1 Ruania albidiflava DSM 18029 K338DRAFT_scaffold00003.3_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47910 29 96.6 32 ............................G TACGCCAGCCCGCCGATGAGTGGACCGATGAT 47849 29 96.6 32 ............................G AAGTACGACGCGGACGCGGAGGACGGGAACGA 47788 29 100.0 32 ............................. TGTTGACACCTAGGCGTCAGTCGGCCACGGGT 47727 29 100.0 32 ............................. CACGCACGCCTCATGGTCGCCATGTGGAACGA 47666 29 96.6 32 .....T....................... GCTACCTGGCGCTGGGGTCTGGTGCGGCGCTG 47605 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Left flank : CCCGTGCAGGAGGAGAGCGCCCGGCTCGCAGCCGAGCTCACCGAGCCTGGACTGATCGTGATCGAAGCACCGATGGGTGAAGGAAAGACCGAGGCCGCGATGCTGGCCGCAGAGACAATGGCTGCGACGTTCGGGCTGACGGGCTGCTACTGGGCGCTGCCCACCCAAGCCACCTCGAACGCAATGTTCGAACGCATGCTCGGCTGGCTCGAGCAACTGCCGGACCCACAGGGCACCGGCAGCCAGTCGGTGGCTCTCGTGCACGGCAAGGCGGCACTGAACGAGACCTACACCGGACTGCCGTTCGCGCGCGCCACCGGCACCGTACGCCCGGAGGACCCCCCAGACCGGAAGACCGCCGCCGTGCACGAATGGTTCCGGGGCCGCAAGCGTTCCATCCTCGCCGACTTCGTCACCGGCACCATCGACACCGTCTTGTTCGCGGCCCTCGTATCCCGGCACATGATGCTGCGCCACCTCGGTCTGGCCGGTTGCAGTAA # Right flank : CCGCTCAAGACCCTGATCTCTAACACGGTGGGGTCTGCGCATGATCGTCTGACCTGTCGTACCGACCTCGTATCGGAACGGTGTCTCTTGCGCTGCCCGAGCTGCTACGGGCGGGCGAACTCGTTGGCAGGACGTTCACGCAGCAGAGAGCCCTCAGAACAACGCAGGCTGCATGCTCAGCTCGGAGAGCGTCGGCCCGACCGGTTCTGCTGCGCCCGGTCGCGCGGTCACCTCGGCAGGGTCGTTCCGCAGCGACCATCGCCCGCTCTTCCCGGAACTGCGACCCTCACCTGCCGCACGATCCCGCGGCGCCCGCTCGGTGAACCCGTGCCGGCGCCGCAGCCGCCGCACCCTGCCCGCGAGCCACTCCCGGTACTCGGCAGAGGCGTACGAACCCCGCCCGTACAGCACCTCGTACTTGGGCACCAGGTCCGGGTAGTCCCGACCCAGCCAACCGAGGAACCATTCTCGAGCTCCGGGCCGCAGGTGCAGTGCACCCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCCCGCGTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 109373-109584 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATWL01000011.1 Ruania albidiflava DSM 18029 K338DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 109373 28 96.4 33 ......................A..... GCTAGAGGTCTTCTCCTGGGGGAGATCTCTAGA 109434 28 100.0 34 ............................ ATCGCCAGAGGTCTGGCGATTCGAGAACCTCTCA 109496 28 100.0 34 ............................ TGGACAAGGTAGCGACGAGACTTTGTCCTCACCT 109558 27 92.9 0 ..................-......C.. | ========== ====== ====== ====== ============================ ================================== ================== 4 28 97.3 34 ATCGCGCCCGCGCACGCGCGGGGAGGAC # Left flank : CGGCGGCGTGGAGTTGATCGGTCGCTAGTGCCGGGGAGGTTGCGGCGGTTCGACCCGGAACAGTGGCCGTCGTTTGAGGCGTGGCGGGCTGCGCGGTTGGAGTTTCACGAGGCGAATCCGGGCGCGTGGCCGGATGTGGTCGCTGTGTTGCAGGGGTCTCGTAATGCGTGGTTGAAGCTGGGTGGGTTGTTGCCGATGCACCCTGGTGTGGATGAGTGGGAGGTGGACCGGTGAGGCGTAGGCGTGAGCGTGTGCGGTCGCGTGTGCCGGAGCATTTGCGGGTGTTTCGTGCGGGTGAGTGGCCGGATTTGGAGGCGTGGCAGGCTGCCCGGGCCGCGTATTGGCAGTCTCACCCGGAGGCGTTTAGGCATTCGTTGGAGTTGTTCGCGGGGTGGGCGAATGAGTCGGCCCGTGCTGCTGGTCGCCCGGTGCCGTTACCGGAGTATGACCGGTGAGTCATCCGTGTCACGTTGGACCGGTACCGGCCCGCGTGAGGGTGC # Right flank : CCTGCCTACGTGCCCGTGCGCAGACGTTCCACTAGATCCGCGTCGAATCCCGCCGCTTCGGCACATTCGGCGCACATGTAGACGCCGGGGCCGCTGGGATGACCATGTGCTTCTGCCAGTGGCACGTAACGGGTCCGGCACTCGGCATAGAGTCGCTGCTGCTCCCTGTCGTCCTCGATGTCCTCGCGTTCGGCCCCGTAGGGGGACCGGTAGAGCCTCCCGTCCGTACCTTCGACGTAGAGGTTGTCTATGGGTGGTTCCGCGTCGGGTCGCCACATCGCGAGCTTTCCGCGGTGGATGCGGAGCTGTAGTAGTCCCTCGCGCTCTAGTTGGTAGGCGGCGCGTCTGAGTGCGGCAGCATCTGATGCGGTGGAGCCTGCGGGTGTCACGTACTGACCCTTCGCGCCCACGTTCTCGATGCGCTCCAGTATCTGCCGCTGCCGTACGCCGTGACCCCTGCTCATGCTCCACTCCTAAGTGTTACGGTGAGTGATTTGTGA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCGCCCGCGCACGCGCGGGGAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.70,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //