Array 1 196591-193049 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCNW02000006.1 Caballeronia humi isolate LMG 22934, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 196590 32 100.0 32 ................................ CATATTGCAGGCTGGATCAGGAACCGCCCTAA 196526 32 100.0 34 ................................ AATGACGGACAGCGCGTGCGGCTCGATTACACGT 196460 32 100.0 35 ................................ CATGCGATATATCCACCCGCGTCCGCGAACCATTG 196393 32 100.0 38 ................................ TTCAGCGCGCGTCGCTGCAGGCGGACGGCAGCGGCTGG 196323 32 100.0 33 ................................ ATCTTCGACTCATTCATCCGCATCAAAGCGGCC 196258 32 100.0 34 ................................ TTAGGACGTCTTCTCGACAAGTTCCGCGGCGTCC 196192 32 100.0 40 ................................ TCCTTCGTCGTTCGGTTTTTTCACGGCGTCCGCGTCGCGC 196120 32 100.0 35 ................................ ACCGACAGGCCCGGCATCCCCCGTCGCACCCTTGT 196053 32 100.0 34 ................................ GAGAGACGCGCGCTCGACCCGGCGCGACGCGTGG 195987 32 100.0 34 ................................ GCGCTTGTGGCCGGCCTCGTAGGCGGCTTCATCG 195921 32 100.0 35 ................................ ACTTGGGCGCTCGCACACCCCGGCCGGATTTGCGG 195854 32 100.0 36 ................................ AATGCGGCAAAGGAGGCGCACCACGCCTATCGGAAT 195786 32 100.0 35 ................................ CATTTGCGCGTGCCGCGTCGGCCTGCTGCTCGGCT 195719 32 100.0 34 ................................ GTCCTCGCGCATACCACTCGGCATTTGGGCGCCG 195653 32 100.0 33 ................................ GTGATCGCGTGCTTCGGAAACTTTGAGCGGTCC 195588 32 100.0 33 ................................ TACTCTATCAAGTTTGGTGCGCGGCAACATTTG 195523 32 100.0 33 ................................ CAGCCAACGGCGATTGCTGCGGGACAGCGTTAG 195458 32 100.0 34 ................................ AGAAGCAGGACGCGCAAGGATTCGGCTCTGCCAT 195392 32 100.0 33 ................................ CCATTGCTGCGCTGGCTGTGCGCGCTGATCGGC 195327 32 100.0 34 ................................ AGGATCAACGCTTGAACGCGATCGAAAGGCGTCT 195261 32 100.0 39 ................................ GCCGGACGACGTCACGACGACGGTAACGCGGGTCGCGGC 195190 32 100.0 35 ................................ GCCGGCCCAGGCGTCGAGCGCAGAGAGATCATCGG 195123 32 100.0 35 ................................ GGTCGCGGCCAGCTGACCGGCGACGGCGTTACGCC 195056 32 100.0 33 ................................ TTGTTCCGGTATATGTGGACGAAGTACTTCCGG 194991 32 100.0 35 ................................ TCTGTCCCTCAGGTTAACTCACCGTTAGGTGGCTA 194924 32 100.0 32 ................................ AACGCCCAACAAGCTGGCTACGCTCGCGACTA 194860 32 100.0 34 ................................ ATCTTTGCTGCTCTCCAAATTATGGCCTTATGGC 194794 32 100.0 34 ................................ AGGACCAGCGGCTCAATGCGATCGAAAGGCGGCT 194728 32 100.0 34 ................................ AGCAATAAGTGGGTGGGCCTCGCGCTCGCGAGTG 194662 32 100.0 34 ................................ TTCCGTCGCGCTCATTGCGCCTCCAGTGTGTGGT 194596 32 100.0 37 ................................ TTTGCGCACACCGCTCGCGCAGTGCGCAGCGTCGCAG 194527 32 96.9 33 ................T............... CGACTTCCGGCGGCAAGCCGACAAGCCGCGCGA 194462 32 100.0 35 ................................ GAGAGCAGCGGCTCAAGGCGCTTTATGGTCCGGTC 194395 32 100.0 35 ................................ GACTGGAGCGGCGCGTTCCATGACAGCTTAGGCGC 194328 32 100.0 34 ................................ AGCGTGATCTTATTTCCGGTGTCGCTGACAACGT 194262 32 100.0 36 ................................ GTCGCCTCCATCACCGTCAGATTGCCTTTGACCGTG 194194 32 100.0 35 ................................ GTCTTAATATGCTTGACGACGGCGATCTGGTAAGT 194127 32 100.0 33 ................................ GGATTGAGCGGACGATCCCCTTGTGGGGGGTGG 194062 32 100.0 34 ................................ CGCTCGACAAGCCGCTGCCGGTCACGATTCCGAC 193996 32 100.0 35 ................................ TCCGTCCAGTCGTGGATTTCGGCCGATGCGGCGGC 193929 32 100.0 36 ................................ GTCGTGCGCGACCGCGCCTGCCTCGGCATACTGCCG 193861 32 100.0 34 ................................ GTCAGCGTCACGTCGCCGATGCCGTGCGTCAGCG 193795 32 100.0 36 ................................ ACTTTCCAGCGCATTGACGGCATCTTTATCCAGCAC 193727 32 100.0 35 ................................ CTGCGCTCCCCTGTCCGCATTGACCACCACCACCG 193660 32 100.0 36 ................................ GCTCGGTGACGCGCGTTCCGGAACCATTGGAGCGTC 193592 32 100.0 35 ................................ TGGACGCGCCGGCGAGGGCTGATGAAGAAGGCGCG 193525 32 100.0 36 ................................ AATGGATGACTACGCACGCGGTTACGCCCGCTCGCC 193457 32 100.0 30 ................................ CACGTGATGATGTTGACCATGCGGCGGTAA 193395 32 100.0 35 ................................ ACCGTCCTCCCCCAAGATGCGAATGATTCGCGGAG 193328 32 100.0 34 ................................ TTTTGCTGCTGGACCTGAGCGGCAAACTGAGGAA 193262 32 100.0 35 ................................ TGGCGTACGCGCATCGTCAGTCCGGCGAAGCTGCG 193195 32 90.6 33 ..................ATC........... GCGACCTTCGCCGACATGTTGTCGACGACACAG 193130 32 81.2 18 .......C..........AG..AAT....... TTGCGTGGATGCCGCAGG Deletion [193081] 193080 32 87.5 0 A........C..............A...G... | ========== ====== ====== ====== ================================ ======================================== ================== 54 32 99.2 34 GTCGCGCTCTACGCGAGCGCGTGGGTTGAAAC # Left flank : GTGCTGGTGAGTTATGACGTCGCAACGACGTCCGATGGTGGGTCGGGGCGCTTGAGGCGGGTCGCGAAGGCGTGTAGGGATTTCGGGCAACGGGTGCAGTACTCGGTCTTTGAGATTGAAGTCGATGCCGCGCAATGGGTCATGCTCAAGCGTCGATTGATCGGGGTTATCGATCCCGAGGTGGATAGTTTGCGGTTCTATTTTTTGGGGAATAACTGGGAACGGCGGATCGAGCATGTGGGGGCGAAGGCGGCTGTTGATATAAATGGGCCATTGATTGTTTGACGCTGGTTTTGAGGGCGATTGCTTGGGCGCGAACGTGGAGCGGCTGGGGAAATGGCGGGAGGTTCGCGGGATTTGTAAGTCGTTGATCTTTCTTTGATTTTTCGCTTCGCGTCGGGGGGTGAGAAGCTGGCGTCGTAGTTTGTTGCAGTGAGCCCTCCCGGTTCGCGGGATGGGCTCTTTTTTTTGTTTGCTATCAATCGCTTATGTGCGATGCG # Right flank : GCCGTACCGAGCGATGCATTGCGGAACTCGAAAGTCCCGCTCTCCATGAACGCGCGACTCCTGACGCGATCCGCCTGGCACCTCCAAACTCAAACCCCGCAAACCACCCCGCTCGCCCCCTCAACTTCCCTGGCCGCTTTAGCCCCTTCCACCTTAAGCAACTCCGGCAACGAAACCCCATTCTTCGCCGCCGTCACTTCGGCCAGAATCGAAACCGCGATTTCCGGCGGAGTGCGACTGCCGATATAAATCCCGACCGGCCCATGCAACCGCGCCAGTTCCAGCTCAGAAAGGTCAAACTCCTTCAACCGTTCCCGCCGCGCCGCATTATTCCGTCTAGACCCTAAAGCCCCCACATAAAACGCGGGCGTTTTCAAAGCCTCCATCAACGCAAGATCATCCAGCTTCGGATCATGCGTAAGAGCAATAACCGCACACCGTTCATCGAGCTTCATCTCCATGACAGTATCGTCGGGCATGGTCCGCACGACGCGGGTCCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCTACGCGAGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //