Array 1 165129-162060 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOP010000001.1 Streptococcus sanguinis strain ST249 Ssanguinis_ST249_NinaOddballs_Sia_NO_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 165128 36 100.0 29 .................................... AAATTTTACAAAATTTATATTTACGCTGG 165063 36 100.0 30 .................................... AAGAACGGGAAAGAGCCTAACAATCCATCC 164997 36 100.0 30 .................................... TCTTGGTCGAGGTTGTCGCTACGGCAGCGG 164931 36 100.0 30 .................................... GCGCCAGCATGTTTTGACAAGGAGGAACCA 164865 36 100.0 30 .................................... AGAGTCGAAAAGCATAGCTTTTTAATTTCC 164799 36 100.0 30 .................................... GTGCTAGAGGTTTTACAGCTTTTGGTGCGT 164733 36 100.0 30 .................................... CTAGGGAAGCGTTGAGTATTCTGTCTGATA 164667 36 100.0 30 .................................... AATCCTCGGGCACATCAGAACGCAACTTAC 164601 36 100.0 30 .................................... TTTTCTTCTAAACTAAATTCAAGTTCTAAT 164535 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAATG 164469 36 100.0 30 .................................... AGCGGTTCATTTTTAGGGGCATTGTTGTCA 164403 36 100.0 30 .................................... CTTTCAGGCGAGACACTTTTTCCGCAATGT 164337 36 100.0 30 .................................... ATACATTTTCAAATATTCTCGGTCAAATTC 164271 36 100.0 30 .................................... GTTTATCGCAGAGCCAAAAGCGTGTGATAT 164205 36 100.0 30 .................................... TTAAACGAGCCAAAATCTCGATCAAGGTAC 164139 36 100.0 30 .................................... AATTTTCAATATATGTCCATTTCCTTTCAT 164073 36 100.0 30 .................................... GTAATTCCCGCACGAACGATAAGAATCGTT 164007 36 100.0 30 .................................... GTTGGGAAGATATAGCAGACTATGTACCTT 163941 36 100.0 30 .................................... CCTTAGAATTATCCACCGATTACAATTTTA 163875 36 100.0 30 .................................... AAGTCCGCTTGTGGATCTGCCTTTAACCAT 163809 36 100.0 30 .................................... ATTATACACCAAGTTTACTTGTTTTGTTTA 163743 36 100.0 30 .................................... TTACTTACAAGTTAAGTATAACATATTACA 163677 36 100.0 30 .................................... TGGACTCTAGATAAAATGATGGCAAGTGCG 163611 36 100.0 30 .................................... CGATGCCAGACCTTACTGTACTCCGTTTCT 163545 36 100.0 30 .................................... CTTTAAACATTTAAAGATCAACGAAGAAGA 163479 36 100.0 30 .................................... ATGGATATTCGAACCTACCTCAATCAAGGT 163413 36 100.0 30 .................................... GCAAAAATGCTAGCCTATGCCGTGTTAATC 163347 36 100.0 30 .................................... CTAATCCGGAAATTAAAGTCCATGGATTTG 163281 36 100.0 30 .................................... TTGAGATGGATCATTTGAGAAATCTCCCTT 163215 36 100.0 30 .................................... GATGTTTAATGGAAAATAAGAAAAGATACA 163149 36 100.0 30 .................................... ATTGCCGTTGTAAGTTATAATTTATTTGAA 163083 36 100.0 30 .................................... AAATTCCTTCAAACTATGTCCGTGATTCTG 163017 36 100.0 30 .................................... ATAAGGATAAGGTTAAACATCTTTCTGAAG 162951 36 100.0 30 .................................... CAATAAGCATTGCTTTAAACTCAGCTTCTT 162885 36 100.0 30 .................................... AAATTAAACCAAAGGTTGATAATATTAATC 162819 36 100.0 30 .................................... GATTGGGATGTCGGCTAGGACTAGTTCCTT 162753 36 100.0 30 .................................... TTCGAATATGCAATTCTCTTGCCCTTTTCA 162687 36 100.0 30 .................................... GGTACATTTCTATGGCTGAGGGAGCTGCAG 162621 36 100.0 30 .................................... AAAAAACGTGGAGCGAGTTGGAACATGCCT 162555 36 100.0 29 .................................... TCTATCATCAGGATTTTCCGCATTAGCAC 162490 36 100.0 30 .................................... CTTCCATTCCAAGACGGAAACCGCCGATAC 162424 36 100.0 30 .................................... TCCAAATGTAAGCCAGTCATAGGCTGGAAG 162358 36 100.0 30 .................................... AAACAAACACACCTGAAACAGTTGCGCAAA 162292 36 100.0 30 .................................... TTTTGACGGTTTGCGTTTGTGTTGGTATGT 162226 36 100.0 30 .................................... TGAGAGTTATTTTGCCCTCTTGTCTCTGCT 162160 36 100.0 29 .................................... CTAATAACGTTCCCTTGACTGTGGGGCTG 162095 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 47 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAACATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : AGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAAGTGCGAGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATTAAGGAGATATGGCGGGCGTTGGATAGGTAGGTGGCGTCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //