Array 1 1135086-1136883 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022142.1 Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1135086 29 100.0 32 ............................. AATGGCGCAGCTTTGGAATATTGGGCCAGCGT 1135147 29 100.0 32 ............................. CAAATCGTCTTGGCTACGTTCGTCTTAACTCG 1135208 29 100.0 32 ............................. GAGCGACGCCAATCACTAATGAAGGGGGCAAC 1135269 29 100.0 32 ............................. TAATAGGTAAATTGTGAATCCGACAACAGCAG 1135330 29 100.0 32 ............................. ACGATGAGGGCGCACAGGGTTGGTCAACGCTG 1135391 29 100.0 32 ............................. TGTTTCTCTTGATCTCAGGGGGAGGGGGAGAA 1135452 29 100.0 32 ............................. GGATACCAATCCTTGGTGTTGGCGCTATCTAT 1135513 29 100.0 32 ............................. ATCCTAACGCTAATGAGGTTGTATGGACCGAG 1135574 29 100.0 32 ............................. ATACATAACAGTTGCATGGAGGCAGACAAATA 1135635 29 100.0 32 ............................. TTGTAACCTGCGGCTATCAGTGCATCGTAATC 1135696 29 100.0 32 ............................. CGCGCCACGTGGCAACGTCATTAGCACAGAAG 1135757 29 100.0 32 ............................. GCGTCAATCATGTCTATATGCCACTGACCACC 1135818 29 100.0 32 ............................. GGGTTACCGCCAAAAATTTTTCACTCCATTAA 1135879 29 100.0 32 ............................. CGTGAGGATTTTTGCGCCTTCATCCTGACCCA 1135940 29 100.0 32 ............................. AAAACCAGGACGACGATCTGTTTGACTGCTTT 1136001 29 100.0 32 ............................. GAGATGCGTTTATCGGAGTAGTTCCATCTTTT 1136062 29 100.0 32 ............................. CAGCCTTTACATCCGCTATCTGCGTCGCGCTA 1136123 29 100.0 32 ............................. CGGGGTCAGCGTCTGGTGGGAGATAAAAAATG 1136184 29 100.0 32 ............................. GGAGAAACACCCGCAGCACCACGGGCGATGCA 1136245 29 100.0 32 ............................. ATTACAAATAATGCGACTATGTATGCAGAAAA 1136306 29 100.0 32 ............................. GTGTCTGGAGATACCACCACGACGCATCGTTA 1136367 29 100.0 32 ............................. GCGCGTTGATAGGTATTGTTCTGGGTATTGGT 1136428 29 100.0 32 ............................. CCAGTGTAATTGTTGTCTGTGACATATAATCC 1136489 29 100.0 32 ............................. TTTACCGCCGCTCAGCTTCGTACCCTGGTAGA 1136550 29 100.0 32 ............................. GCTTACATTGAGATTCCTTTGTTTGTCGTGGG 1136611 29 100.0 32 ............................. GTGGACGACCTTGAGCATTGATTTAGGTTACG 1136672 29 100.0 32 ............................. ATGATTTTCTCCTCAATTACCCGCTATAATAC 1136733 29 96.6 32 .............T............... TTTGCGCTCGCTGACGTCAACAGCTTCTACGC 1136794 29 96.6 32 ............T................ CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC 1136855 29 86.2 0 ............T............G.TA | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCCGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGATGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAATGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT # Right flank : ATTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTCGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCTCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //