Array 1 4036-6749 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJGH01000032.1 Lachnoanaerobaculum saburreum F0468 ctg120007833985, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4036 28 96.4 34 ..............A............. TCGTCACCCTTATCAGCTTCGCAAATATCAATAA 4098 28 96.4 33 ..............A............. TATCTAAAGCGCGGAGACATACTTTTATATGAA 4159 28 96.4 33 ..............A............. TTCACTTCTACAATTGGCTGATATTGACCTGCT 4220 28 96.4 33 ..............A............. TGGTACCGTTTACAAATGCATCGGAATCTTTGA 4281 28 96.4 33 ..............A............. TAAAGTTTTAAGGTGTAAAGATTCCGGCAAAGC 4342 28 96.4 33 ..............A............. CCTGCTGCAATATCACATGCGACACCTATGGGG 4403 28 96.4 33 ..............A............. CAATACTTGCCGCTGCATATAGCAGAGATAGAA 4464 28 96.4 33 ..............A............. TCAAATTCAGTGACCATCAGATAATGCAAAACC 4525 28 96.4 34 ..............A............. TCAGATTTCATAATCCAGTAAGCTTTTGTTTGTA 4587 28 96.4 33 ..............A............. TAAAATCACAGATCTGATGGACAAATTTAATCA 4648 28 96.4 33 ..............A............. CAGCATCGGTAATTTAAAAGTTACAGATGAGAT 4709 28 96.4 33 ..............A............. CGGATCAGCTATAGTTACACCCTTATTTCTTAC 4770 28 100.0 33 ............................ CTTATCGCGAAAACGGTGAATTTAATGCAATTT 4831 28 100.0 33 ............................ TATCTTTCAGAGGACTTACTGCAGATATCTTCA 4892 28 100.0 33 ............................ TGAGTACCACTATGAAAATGGAATTTTGTATTC 4953 28 100.0 33 ............................ TACAAGCCTTCGGGTAAGGCCTCTTCAATTAAG 5014 28 100.0 33 ............................ TGATAAATCATTTTTCCCTAGAATAAAATTTTT 5075 28 100.0 33 ............................ TCAACTCCGAATTTTTCTATAAGCTTCTTACAC 5136 28 100.0 33 ............................ CGACCTGAGCATTCCAACCACCCTGAGCACCAG 5197 28 100.0 33 ............................ TGATAATTTAGAGGTAAACACAGTAAGCTGGGC 5258 28 100.0 33 ............................ TTGGTTTATGGGTAAACAAAAAGTAGTATTTAA 5319 28 100.0 33 ............................ TGGAAGACGACATCCGAAAGACTATAGAAGACA 5380 28 100.0 33 ............................ CGGCAGATAGCGAAGGTGTAATAAATTGGTGTT 5441 28 100.0 33 ............................ TGAGCAATTTGTTAAGGATGCTTTAATCGGATA 5502 28 100.0 33 ............................ TACAATCTTTGACTGGTCGCGTTTTGTGCCGGC 5563 28 100.0 33 ............................ TAAATTGCACGATGAAATATGCGTGTGTGAAGA 5624 28 100.0 33 ............................ CATTATCATTGATGAATATGAGTTGAACGAACG 5685 28 100.0 33 ............................ CGAAAAACGAAAGTGGGCATGAAGCGCTTTGTA 5746 28 100.0 33 ............................ TGGAATAAAGACGGGAAAGATACAGATAAAAGC 5807 28 100.0 33 ............................ CTTCCGCATTGGCGTGCGGGGGTTCTTTTTTAT 5868 28 100.0 33 ............................ TGCGTAGATTTAGACAATTGACAAGGTCGGATA 5929 28 100.0 33 ............................ TAGAGATTATTCGCTAAATGGCGAAGTATTTTC 5990 28 100.0 33 ............................ CAGAAGCACCATATGCTTCCGCAACATCTTCGT 6051 28 100.0 33 ............................ CAGCTTTCCGTCATATCCGGCTTGGTTGTTTGA 6112 28 92.9 33 ...........A.......A........ GGGATGACAACTCCTATGGTTGCTTGCCCTGTA 6173 28 100.0 34 ............................ TCAGAACTTTCTCTATTTTTTCAAGCTTATAAGC 6235 28 100.0 33 ............................ TGTGGTCCTTGGATTTTTAAAAGGTATCAAAGA 6296 28 96.4 33 .................A.......... CGGTGGATGAAACAATACTGAAGGCACTTGCTA 6357 28 100.0 33 ............................ TGATGATATATCTAAGGTCTTCTTAAACCTGGA 6418 28 92.9 33 .........A....A............. TACAAAAGACTCTGCGAAACCTTAGGGCTTGAG 6479 28 96.4 32 .......................T.... GGAACTGGTAATACTTCATTTTTACAGGTTGC 6539 28 100.0 33 ............................ CGGTCAACAGGTTCCAACTATTAGAAGAATGGA 6600 28 92.9 33 ........T.........A......... TAGAGTGCTTTTTGGAACAAATGCCGAAATCTT 6661 28 100.0 33 ............................ TGAAAAAGTTCTATTTGGAATCAATGAGGGATA 6722 27 92.9 0 .......................-..T. | C [6747] ========== ====== ====== ====== ============================ ================================== ================== 45 28 98.2 33 GTGTTCCCCGCGTATGCGGGGGTGATCC # Left flank : AATGAAAAAAATGTTATTATTGAGGTAGGGGCAATAAAATCTGTAAGCGGAGTACTTAGTGAGTTTCAAACTTTGGTAAATTATGAAGGCACTTTGCCGAAGCATATAGTTTCATTAACCGGCATTACAACTGATATGTTAAAAAAAGACGGCAGTGATATAGCTGTAGTTTTAAAAGACTTTGTGAACTTTCTGGGTGACTTGGATATTATCGGATATAATATAGGATTTGATATTGACTTTATCAATATTGCTTTATCAAAATCAGGGCTTGAAAATTTAAACAATAAAAGATATGATTTAATGAGGTTTGTAAAGAATGAGAAATTATTTCTGGAAAATTATAAATTACAAACCGTGATTAAAGAATATGGAGTAGGTGATAAAGTGCCACATAGAGCATTGGAAGATGCCAAAATGATATATAAACTTGCGATGAAAGTAAATAAATTCAGGGACTTATATAGTCAGGTATAGCCTTTCTACAGGATCTTTTTACT # Right flank : CATTATCCGAATGCAGGATAATATGCCCCAATAGATGTTCCCTGCGTATTCAGGTGTACTTATTAAGCGTAAATATTTTTTATTTTAGTTCGCAGGTGTACTTCTCTTTGAGTATCTATATGAATCAGCCTCTACAATATGCTCATATATCTTTTTTTGATAATATATTGAGCATAATATAATATTGATTTATTACATTACTATAATATAGTGAATCAATATATTATAAAAGAGTCTATCAGGAACCGGACAGGCTTAAGGCAGGAAGTGTATGTATATAGTCAGAGAAACTATTGGAGAATATTTCTAAGAACCACATTATAGAGATTGTAACTGTTTTGCACTTGAAATATTGAAGTTTAAAAAGTTTTAGAACATTAGTAAAATTTGAAAATATAAGTAGTAATTATTATTTATAAAAATAATTGTAATAATTATATACTTTGTACAAATATAAAATTATATAAAATTTTAAGTGTATACATATTGAAAATATAATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : GTGTTCCCCGCGTAAGCGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19563-20181 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJGH01000037.1 Lachnoanaerobaculum saburreum F0468 ctg120007833980, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 19563 36 100.0 39 .................................... TGGGTGATATTGGATATGCCCAATCTGACTGGTTATCTA 19638 36 100.0 34 .................................... AATCAACATCCCACAGCATATGGAAGCCTGACCA 19708 36 100.0 41 .................................... TATCAGATTGCTCTTGATGGAAGAACTTCTTGTAGTCCTTC 19785 36 100.0 35 .................................... CCCTACCAAGATATCTGAAACAAACTCGTCAACAA 19856 36 100.0 38 .................................... TTATAATAGACACGAAATCTCCTTCTCCCCGTTAAGCC 19930 36 100.0 34 .................................... GATATTAGCGGGATAGCTATACAACATGCAATTA 20000 36 100.0 36 .................................... CATTCGTACTCCGCATCCATATCCGTTTCATACACA 20072 36 100.0 38 .................................... CTGTTTCAAGGGTCTCATTTTGACCAAGACCTAATATC 20146 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 9 36 100.0 37 GTTTACAGAAGCTAACCCCGATAAGGGGACGGAAAC # Left flank : TGATAAAGAAGAGCCTTCAGAAAATGATGCAGAGGATTCTATAGATGAGAATGCAGATGATGTGGCAGAGGAGGACATTTCCAAGTCTGATACAGATGATGTGGAAGGTAATGAAGGATAAGGTATTTGGATTGCCGGTGATGCCAATCTAAATAGATAAAGGGGCTGCCTAATGGCGGTCTCTTTTTATCAATGCGAATGACTGAATTTTGAGATTTTAAATAAAAATATCTTTTGACCGCAATGCCATATTATGGTAGAATAAATAAGTCTTAGAGAAGCATAAGACAATATTAAGTAGACTTTATGTGTTGTATTTATACAGTTGATTGTATTTATATTCTAAAATTTACGATTTTGAGACGGCTCCCGTAAAATAAGGGTTTGCGGCACTTCAAGTAACACAAGTTACCTGATTTCCTCCTAAAATCGCTTGTTAAATTTTAGGCACGCTAAAGCCCCTTGGAAGCCTCTATTTATAAGGCCTGAAAAGGGGTAGG # Right flank : TATATTAGTCATGAAAGTTCTGATTCTATTGAAGATACTAGTATATCATTAATTAAATAACTAGCACAAATAATTATTCTGTGGTATAATAGGATTATTCTAAAAAGAGAGGTGCCTATTATGCCGAGAAAGTCAACTTCCTTAACCCTTAATGAAGGCGATTATAAATACCTACGATCATTGATCAAGCAGAGAACCATACAGGCTCAAGTAGTTATAAGAGCCCATATATTGTTGGACAGATGTAAGGGAACTCCAATTCGTACTATTGCAAAAATATACGATATAAGTCCTTCTACCGTGCAACTATGCATCAAAAAATATATGGATGGTGGAACTAAAAGTGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACAGAAGCTAACCCCGATAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 114-430 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJGH01000057.1 Lachnoanaerobaculum saburreum F0468 ctg120007833983, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================================= ================== 114 27 100.0 47 ........................... GAATGAAATAGAAGACCTTAAGAAGCAGGCAGTATCCTGTTTCCGTC 188 27 100.0 44 ........................... TGATAGATATGTTTGAAACACTTGCACCGCAACTTGTTCCCGTC 259 27 100.0 42 ........................... AGTAATTATAGTGGTAAACAGATTGTATATTACGTTTCCGTC 328 27 96.3 49 ..............T............ TGTTGTATAATGACTTCAACTTTAAAAAATGGTAGTAATGGTTTCCGTC 404 27 96.3 0 ..............T............ | ========== ====== ====== ====== =========================== ================================================= ================== 5 27 98.5 46 CCCTTATCGGGGTTAGCTTTTGTAAAC # Left flank : TTTAATAAGATATAAACTTTTAAAATAAACATATAAATAAAATAAAGCCATGTACTTGGCTTCATTTTATGATGAATGCAGATATTTTGCAATAACAATATTCTTAAACAATTC # Right flank : CCCCTATCCTCTTTCAGGCCTTATAAATAGAGGCTTCCAAGGGGCTTTAGCGTGCCTAAAATTTAACAAGCGATTTTAGGAAAAAATTAAGTAACTTGCGTTACTTGAAGTGCCAAAAACCCTTATTTTACGGGAGCCGTCTCAAAATTGATATTTTAGCAATATAAATACACTTAACAGTATAAATGTAAAATACAAAGTAAAGTCTACTACCTGTCTTGAAATCTATGAGACTTCCTCATTTTAACATATGTATTATCTTTTTTAAAGCAAAAATTTAAACAATCATACTACATAGAAATACGGTCATGTATCTCCGCCATCTTGGCATCATTCAGCCTTGACTTACCATGGATTTTTGTAAAAGCTATATATCCACACATTCTGTCTATCATAGTCATTTCCTTTTTGCCACATCTTGGACAAGTATCCGGTCTGTCAGATCCTATATTGTTCCACTGATACCAACAATTGTCACAATAAGCTAAAGAAATATTTAT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.02, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTATCGGGGTTAGCTTTTGTAAAC # Alternate repeat : CCCTTATCGGGGTTTGCTTTTGTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 100-719 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJGH01000092.1 Lachnoanaerobaculum saburreum F0468 ctg120007834027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 100 36 100.0 35 .................................... ACCAATCGTCATCATCATATGGACCTGCATAATAT 171 36 100.0 36 .................................... TTTAAATTGGGTGGAAGGAAAAAAACCTATTATATG 243 36 100.0 40 .................................... TATCATAATTCGTTAGTGCTTGTATACCTATACACTTAGC 319 36 100.0 34 .................................... GATAATATGGTTGATAAAGTTGCAATAATGTTTG 389 36 100.0 36 .................................... CGATTGCATCGGCAAGTGAAACAACTGCTTTTAAAA 461 36 97.2 37 .......T............................ AATTTACATCTTTAACTTTATGTGGTTTACAGTCAAA 534 36 100.0 43 .................................... TCCTGCTTAAACCAACCTTTTATCATGTATCCCTTCTGGTCGA 613 35 94.4 36 ...........T...-.................... TCTACAGTCAGGGCGCATACTTCAGACCGTCTAAGA 684 36 86.1 0 ...............................ATTTA | ========== ====== ====== ====== ==================================== =========================================== ================== 9 36 97.5 37 GTTTACAGAAGCTAACCCCGATAAGGGGACGGAAAC # Left flank : TGGTCATACAAAATGGATGAAATTAGCGTTACCGAAGCGATTGAAGCAGGAATTAAAACCAACGAGGTTTGTAACAGTTAATAATTATTCGATATACTAG # Right flank : AAGAATATTTTTACTAAATAATAAGTTGTATTAAAGTGAGATTACTAAAAGGAAAAGAGAATGTAGCTATGTGTGAGGTATCAGTTAGGGTAGAGGTAGGGGAATAGAAAAAGACACTGTAGATGTTCTTATTTCTCCGGTATATGAAAAAACAGAAGGTGAAAGTTCACCTCCTATTTTTGATTATCATTTATCAATAAATTCTCATATCCTTCTAAGGACTTTACATGAAAACCAATTATTTTATCTCGAAGAGTTTTAGGATATTCAACAATGGCCTCTCCGGGATTGAATCTGCGAAAATATCTATATAGCTGTTCTGTGGAGCATTTAAAATAGTACCTAAAGTTGCCCTCGGTAGTAATTTCCTTCCTGTCTACCTTCGGTCTGCCAAAATAAATATGTTTAAAAGACAGTGTTCCGGCAGGAGTTAAAAGTACACAAGTTTCTTCCAATTCACCGTTTATAGCGTAAGAAGCTCCAAGTTTGTTTGTGAGGTC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACAGAAGCTAACCCCGATAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //