Array 1 32-2501 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXCZ01000031.1 Cellulomonas bogoriensis 69B4 = DSM 16987 strain 69B4 contig26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 32 28 100.0 33 ............................ CGCAACCCACGACCTCCGGCCGAGCCGGAGGGG 93 28 100.0 33 ............................ AGGTCCAGGCCGCGCTGGAGCGCCCTGGTGTAC 154 28 100.0 33 ............................ CCCACCCCGGAGGCGAACTCGTCGAACCGAGCC 215 28 100.0 33 ............................ ATCGTCGCCGCGTCGGCGGTCAGCCGAAGGTAC 276 28 100.0 33 ............................ CCATCACAGGTCCCCGAACAGGTCAGCGAGCGC 337 28 100.0 33 ............................ TCGGTGAGGCGACGGAACCGGCGGCGGAGCTTC 398 28 100.0 33 ............................ CGCCCATCGGCGCGGCGCACACGCTCCCGCCGG 459 28 100.0 33 ............................ GCGAACAGCTCCTGCTGGGAGACGCCGAGATCG 520 28 100.0 33 ............................ TACTGCTAGTGCTGAGATTCGCTGGCGTTCGGC 581 28 100.0 33 ............................ CGCACGACCTCGGTGTGGACCGTGTGCCCGACC 642 28 100.0 33 ............................ AAGGTGCTGGGGCCCGATCCAGTCGTCCGAAGC 703 28 100.0 33 ............................ TGCGGCCGGTTATCCGACGTCCTGATCCATAGG 764 28 100.0 33 ............................ ACGATCGAGACCCCTCAGGGCGCGGCTGTGTAC 825 28 100.0 33 ............................ ACATCACGGTGCCCACCCGTCAGCGCGGCGACG 886 28 100.0 33 ............................ GCGGTGTTGAAGCGTCCTCTGGATGATGGTGGC 947 28 100.0 33 ............................ GCTGCTGGTGGCACGGAGGAGGCCGGGCTCCGG 1008 28 100.0 33 ............................ GACAACGCCTACATCACCTGCGTCATCGTCGGA 1069 28 100.0 33 ............................ CCGTCCGCGTCCCGCGCCCCCGACCGCACAACC 1130 28 100.0 33 ............................ GGTCCGAGTCCGATGGCCCTGTCTTTGTCGCCC 1191 28 100.0 33 ............................ TGAGCCGCACTGTTCTCCATCGGGTCCCACGGG 1252 28 100.0 33 ............................ GACAGCCAATCCAGATGCCGGCGGGCCGCCGCG 1313 28 100.0 33 ............................ GCGCCTGGGTTACCCGCGGTTGGGGCGCCGCCG 1374 28 100.0 33 ............................ TGGTCGAGCCACCAGCCCGGTGCCTGGATGGTG 1435 28 100.0 33 ............................ GTGCCGTAGCCGCGTTGGGTGGTGGTTCGTTTG 1496 28 100.0 33 ............................ GAGGCCGGGTTCACCCCTGTGCGGGAGACGGTG 1557 28 100.0 33 ............................ GACGGTAACGGCCAGTACTTCGGTGGCGGTTAC 1618 28 100.0 33 ............................ ACCTCACGTGTCTCTATGCCCGGAGGCAGTATG 1679 28 100.0 33 ............................ CCCTCGCCTGGGAACTCGGGCTCACCCACCGCA 1740 28 100.0 33 ............................ GGGATGGCTATCCCGCCGGATATGCGCCGGTTC 1801 28 100.0 33 ............................ GCGCACACCATCTCCCAGCTGCGGGAGGAAGGG 1862 28 100.0 34 ............................ ACCCCCCACGACATCGAGACGATCAAGACCCAGT 1924 28 100.0 34 ............................ GGGTGAGGTGTTCGCTGAGCGTCGCGCGGAGGCG 1986 28 100.0 33 ............................ TCGTCCTCGACCTCGGTCTGCCCGTAGAGGTCC 2047 28 100.0 33 ............................ GCAAACCGCAACCAATCCTGCCACCCCGACGAG 2108 28 100.0 33 ............................ AAGGTCGCGCTGGGCAAGCTCGTGGACGAGAAC 2169 28 100.0 33 ............................ CTACTACAACCCCACGGAGGAGACCTGATGTGG 2230 28 100.0 33 ............................ GCCCTCGCTTGGGAACTCGGACTCACCGACCGC 2291 28 100.0 33 ............................ GCTGGTGGAGACGGACCCGACGCAGGCGGAGCG 2352 28 100.0 33 ............................ TCGATTCAGGATGCGGCCCGTAAGCCGGTGAAC 2413 28 100.0 33 ............................ ACGGAGGCCGCTTCCGTGCCGACCGCCAGCGAC 2474 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 41 28 100.0 33 GGATCACCCCCGCGAGCGGGGACAGGAC # Left flank : AGTGTCCGAGCTCGGCGAGTACCTCGAGCGGG # Right flank : CACTTGGTGATCAGCATAGATGGCCGGTGTGGCAACGTTCTGGCTTCACTTCGGGCCGACGCGGCGCCCGTACTTCCTGCGGCGCGATGCTGCGCTCCAACCGCTCGGGCGACCCGGTGCGTCGGGTGAGTCCTCGTGAGGTCGACGCATCAGGACGACGCCCTCGTGGTCCTCAGGCTCCCAGTGGTGGCCGTGGGTCAGGACCGCGAGTCTCTGCTCGCCGGGGGCCGTGTAGATCAGCAGAGCACGGCCGCTTCCGATCAGCTCGGTGACGCGGGCCCAGAGGAGGGTGCGGACGCGCTTGGTCACGTGGCCGACGAAGACGCCCGCCGAGACTTCCATGAGCCAGCGGGTGAGGTGGCCGCGCAGCCGTTCCGGGCATGCGGTCAGGACGAGGACCATCACCAGTCCGGCTCCCCGTAAGCGGTGCCCCCGGCGACCGTAGCCGTTCCCCCGTCCCACAACCGGACGACGTCCGCACCAAGATCCTCGCTGTCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCCCGCGAGCGGGGACAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.30,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 4474-7311 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXCZ01000140.1 Cellulomonas bogoriensis 69B4 = DSM 16987 strain 69B4 contig25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4474 28 92.9 33 ...A...T.................... CGCGCGGGGGGGTGGACCCCGGAGCCCTGGGCC 4535 28 100.0 33 ............................ GCTGAGGATGGTGACCGGGTGCATGTGGTGCCG 4596 28 100.0 33 ............................ GGGTCGCGGTTGCAGGTCGTGTGGGTGTCGGGG 4657 28 100.0 33 ............................ CAGAGCACTACGCGCTTCGGTGCCGGACACCTG 4718 28 100.0 33 ............................ GTCGATGTCCATGGGTGCCCTAGCCCCGTTGCG 4779 28 100.0 33 ............................ GGTGACACGGGGGGTGGTGGTCATGGCCTTTCC 4840 28 100.0 33 ............................ TCTCGTACGGAGGCTACGGCGGCTGCTATGGAG 4901 28 100.0 33 ............................ CCGGACGGCCACCCCCGTGCGGGCACCCTGCGG 4962 28 100.0 33 ............................ AGGGCCCGGTTGTGGGTGACGTGCGCGATGTGG 5023 28 100.0 33 ............................ GTGGATGTCCATGGGTGCCCTAGCCCCGTTGCG 5084 28 100.0 33 ............................ GGTGACACGGGGGGTGGTGGTCATGGCCTTTCC 5145 28 100.0 33 ............................ TCTCGTACGGAGGCTACGGCGGCTGCTATGGAG 5206 28 100.0 33 ............................ CCGGACGGCCACCCCCGTGCGGGCACCCTGCGG 5267 28 100.0 33 ............................ AGGACGATGCCGTTCCGGCGGGCACGCGTGCCG 5328 28 100.0 33 ............................ TTGTGCGGTGACCGTGACGGGGCCGTGCAACGG 5389 28 100.0 33 ............................ GAGGCCGCCGACGTCGAGCGGGAGCGGCATGCG 5450 28 100.0 33 ............................ GACCCCGGAGCCCTGGGCCTTCACTGGGGGTGG 5511 28 100.0 33 ............................ ACGGCCCGGTTGTGGGTGACGTGCGCGATGTGG 5572 28 100.0 33 ............................ GTTCCGTTCCTGACCGGGGACAACCTGACCAGC 5633 28 100.0 33 ............................ CGTCGCGGCCTGGTCAGGGGTGGTCATCGTGTC 5694 28 100.0 33 ............................ CGCCTCACCCTCTACCGCGACCCCGAAGTCAAG 5755 28 100.0 33 ............................ GAGGGGCCCTGCGGCCGATCCTTCGTCGGGTCG 5816 28 100.0 33 ............................ CCGGACGGCCACCCCCGTGCGGGCACCCTGCGG 5877 28 100.0 33 ............................ AGGACGATGCCGTTCCGGCGGGCACGCGTGCCG 5938 28 100.0 33 ............................ TTGTGCGGTGACCGTGACGGGGCCGTGCAACGG 5999 28 100.0 33 ............................ GAGGCCGCCGACGTCGAGCGGGAGCGGCATGCG 6060 28 100.0 33 ............................ GACCCCGGAGCCCTGGGCCTTCACTGGGGGTGG 6121 28 100.0 33 ............................ ACGGCCCGGTTGTGGGTGACGTGCGCGATGTGG 6182 28 100.0 33 ............................ GTTCCGTTCCTGACCGGGGACAACCTGACCAGC 6243 28 100.0 33 ............................ CGCCCCACCTCCTGTCCCCCGGGGGTGGGGCGC 6304 28 100.0 33 ............................ GTCGGGCCCTGCGGCCGATCCTTCGTCGGGTCG 6365 28 100.0 33 ............................ CATCGCGGCCTGGTCAGGGGTGGTCATCGTGTC 6426 28 100.0 33 ............................ CGCCTCACCCTCTACCGCGACCCCGAAGTCAAG 6487 28 100.0 34 ............................ GACCAGCTCAGCTTCTTCACGGTCGAGGTGGGCG 6549 28 100.0 34 ............................ AATATCGCCCCGATCCCGGTTGCCACTGCGGGGT 6611 28 100.0 33 ............................ GTTCAGCAGGCGGGCGCAGATGATGCGGGCCTG 6672 28 100.0 33 ............................ CTGGCCGCCACCCCCCGCCTGACCCTGGCCCAG 6733 28 100.0 33 ............................ TCGTCGGACCCCTCGAGGACTTCAGCGAGGGTC 6794 28 100.0 33 ............................ CACCGCGGCCTGGTCAGGGGTGGTCATCGTGTC 6855 28 100.0 33 ............................ CGCCTCACCCTCTACCGCGACCCCGAAGTCAAG 6916 28 100.0 34 ............................ GACCAGCTCAGCTTCTTCACGGTCGAGGTGGGCG 6978 28 100.0 34 ............................ AATATCGCCCCGATCCCGGTTGCCACTGCGGGGT 7040 28 100.0 33 ............................ GTTCAGCAGGCGGGCGCAGATGATGCGGGCCTG 7101 28 100.0 33 ............................ CTGGCCGCCACCCCCCGCCTGACCCTGGCCCAG 7162 28 100.0 33 ............................ TCGTCGGACCCCTCGAGGACTTCAGCGAGGGTC 7223 28 100.0 33 ............................ CAAGTGTCCGAGCTCGGCGAGTACCTCGAGCGG 7284 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 47 28 99.8 33 GGATCACCCCCGCGAGCGGGGACAGGAC # Left flank : CTCTCCTCGGGATCCCCGCCCTCATCGGAGTCCTCGTGGCGCGCGAACGCCGGGCGAAGAGAGCCACGCACGCACCGCCTGTGACAGGACCCGCGTGAAGGGCTAGCACTACGGCAAGAGCCATGGGGGACGCAAGGCCCTACGGACCGCTGCACACGGGGGTGAGCCTTGACCCGCGGGTGCGGGGCGTGAGCCGGGGGTTTCCCCGGTTCGTGGTGGTCGGCAACGGTGTCCTGGGTCTTGGGCGCCTCGCCGTGGGCGCCGGGACGCTCCTCCTGCCCGGGCAGGGACGGTCGTGGAGGACCACATCGCGATCGTCCTGGCCCACGCCGTCGACGTCCTGCCCTCCCGCCAGGTGGACACGCTCCTGGTATGGGTCCGGATGCGCGCAACGCGCACCGAGCTCACCACGGCACAGGCAGGCGACGACTGACCGGCCCTGACAACGGAGCGGGCACCCGCAAGATGCCGCGTGCTCCGTCGTGATGCACGCCGTGCCG # Right flank : CGCAACCCACGACCTCCGGCCGAGCCGGAGGGGGGATCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCCCGCGAGCGGGGACAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.30,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [30.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 45004-44551 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXCZ01000003.1 Cellulomonas bogoriensis 69B4 = DSM 16987 strain 69B4 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 45003 36 100.0 35 .................................... TAAAACATCCCCTGAGGGGATGTAAAGGGTTTAAA 44932 36 100.0 33 .................................... GGGTACTCCAAACGCCAAGCCTTAATCGTGTCA 44863 36 100.0 32 .................................... ATCGAACCCACACTGGATCGATTTTAAGTCGA 44795 36 100.0 32 .................................... CTTTAGCGGCAGGACGCACCCCTAAACCACTT 44727 36 100.0 33 .................................... TCGTCCCTCATCTCCTGGTTGTGACATGTCACG 44658 36 100.0 35 .................................... CAGAAGTCCAGCCCCGACATCTTTCCGTAGGCGGA 44587 36 77.8 0 ............................TGCCGGGG | A [44553] ========== ====== ====== ====== ==================================== =================================== ================== 7 36 96.8 34 GTTCCACCCATGGCCCGAAACTGAGGGCATTGAAAC # Left flank : CGATGCGACTGGCGGAGGCCCTCCGCACGCCGGGCGGCCCCTACCGGCCCTACGTGTGGCGTTGAACCATGATCTGGATCCTCGCCTGCTACGACATCGCCGACGACGACCGCCGCAGCCGCCTGTCCGACCTGCTCGCCGAGCTCGGCCCGCGCGTGCAGCAATCCGTGTTCGAGTGCCGCCTGCCGAGCAAGAAGGCCCTGCGCCGGCTCCTGGGTGAGCTCGCAGCGCTGATCGACCCTGTGGAGGACCAGGTACGCGTCTACGAACTCGGCGGCCAGGGCCCACGCCCGCAGATCGTCGGGACGCGCATACTGGAGGAGTGGAGAGACATGTGGGTCGTGTAGAGCGCGGGGACCGCGCGCGCGACACATCTGCGCTGGTCACAGCCATCGATCCGCCCCAGTCCCCCGCTGGCGCGCACGCCGTCCCGCGCGCACGCCCTCGCGCGCGCGTTCGCCCGCGTCAGCCCTGGTCAGCCCGGGGTCAAAACGGGTAGG # Right flank : GCGGGCGGCTACGCCAACGAGAGGCGGGCGGCCGCGCGTTCGGGCGGCTCCAGCCTCAGGTCAGCGAGCGGTATCAATTTCACCCTTGTGCACGGCGGGGCGTTCTGATGAGCTCTCACGATGGTCGAGTCGCTGTCGCGTGCCGTGTGGAGCTGCCACTCGCACGTCGCCTCACCGGAGGACCTCCTGTACGGCGACCGCCTGGGCCACCGGTACGAGTACGACTCCCATGTGATCAACCACGCCCAGGTCTCCGTGGGCGACCTGCTGGTGATCCGTGACGCACACCTGGTCTACGGGTACGGGGTCGTGGAGTCGATCGACCGGCGACCGGGAATCAAGACGATGCGCCGGTGCCCCACCCCCACGTGCCGCTCCGCGGACATCGTCGCGCGCAAACGCTTGTCACCCACCTACCGCTGCAACGACTGCAAGAACACGTTCGCGGTGCCCGTGCCGGAGGAGAAGGACGTCCTGCTCTACTCGGCGACGTACCAGAA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCACCCATGGCCCGAAACTGAGGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //