Array 1 396508-396249 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 396507 36 100.0 37 .................................... TGTAGTTGATGATCGTGGTGCCGTTCATCGTCACGAT 396434 36 100.0 40 .................................... GCCCTACTACGGGCTGAACGCCGACGGCAGCCCCGACGGG 396358 36 100.0 38 .................................... CCGGGGGTACCGAACCATGTTCCGGCCGAGTCCTTCTC 396284 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 4 36 100.0 39 GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Left flank : GCGATCAAGGAGATCTACAACGCCGAGGATATCGACAAGGCCCAGATCGCGGTCAAGGCCTTCGAGGCCGACTTCGGCGCGAAGTATCCCAAGGCGGTCGCTAAGATCACCGACGACCTCGATGTGCTGCTGGAATTCTACAAGTATCCGGCCGAACATTGGATTCATCTGCGAACGACGAATCCGATCGAATCCACCTTTGCCACAGTGCGTTTGAGGACCAAGGTCACCAAGGGGCCCGGATCACGAGCGGCCGGACTAGCGATGGCCTACAAGCTCATCGACGCCGCCGCGGCCCGCTGGCGTGCCGTCAACGCCCCACACCTGGTCGCCCTGGTCCGCGCCGGCGCGGTCTTCCATAAAGGCAGACTGCTCGAACGACCCACCGACATCACCCCGCCAACATCGCCCTCAGACGGCGGTCAGCACGCCGGAACGGAGGTCGCCTGAAACACCCCGATCCACAGGTATTGACAATTCCTCTGATACCGGCTGCATAC # Right flank : CTGCGAGCCAAAAATACCATGCCTGGCCTGCGGTTTTGTCCCCTCGGCGCGAGGGCTCGCCACTTCGGAGAGCACCTTTGTGGTTTCCGAACGAGCTATGCGGCCGAGGAGACTATCTGACCTGCGATTTCTTGACGCGACCGCTGGCGGGGATTTCTGCAGCGAGGCAGCCCTCGCACATGTCAGATAACGATCACCGACTGGTCCGTGATTGGTCGAGTGCGCCCGATACAGACGAAGCGGTCCTCTTGTATGGCGGAAACCAGGCCCAGATCGCAAAGAAGTACCGAGTCTTCGCTCGCTTCGATGATCTGACTCAACTCGTGGCGAAGTCGCCGCAGCTTCGCTGGGCTGGCATCAACGACGAACACGCTGTACTGGACTCGATCACCGTAGGCCTGCAGCTTGTTTGAGAGTCTCGATCGCCGCTGGTCACTCGGAACGTCGTATGCGATAAGGAATCGCCGCGCGTCTTTTCGGGTCATCTCGTAGTGATACCA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 2 398042-398520 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 398042 36 100.0 36 .................................... AACAGGCATCCGAGTTTCGAGAGCAGTGTCTGGCCA 398114 36 100.0 37 .................................... CTGACCCCCGACCCCGAGTACCTCGGTGTCTTCCCGG 398187 36 100.0 41 .................................... CCGTCCCCCTCTGCGACCTTGGACCGGAGCCTCGCTCACGA 398264 36 100.0 38 .................................... CGATAGGGTTGCCGTCGAACGCGGTGGCGCCGTTCAGG 398338 36 100.0 38 .................................... TCTTTGAGACCCCGGCACGCCGTCATGCGTTGCGCAGC 398412 36 100.0 37 .................................... AACGTCCACGGATCCTCAAGAGGACGCTTCGGCATGT 398485 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 7 36 100.0 38 GGTGCGGTTCCTTCGGGAGCCGCTCTTCATTGAGGC # Left flank : GCGCGCCCAGGCCGGCAGGATCGCCGAGGAGAACCGCTTGCGTTCACCGGTGTCGGGGTCGACACGGCGGTCGTTGACCCGCGGCGCTTTCACCTGCACCGCGCCGGCGGCGGTCAGCACCTCCCGGGGCTGGTGATAGCCGTTTCGCACCACCAACCGGTGACCGTTCTCGTCGAGTTGATCGGCGAACTGCGCCACGTAGGCGGCGACCTCGGCCTGCAACGCCGCGGCCAGCATCTGCCGGGCCCCGTCGCGGACGATCTCATCCAACAACGACCGACCAGCACCGCTGGCCTTGTCGTTGGCGTCCTCGGTGTCGTGAACTACGGTGAGCATGGGCGTACCTTCCCAACCAGCGCGCCAACGCCGGTCTTGATCGAATACCTGATTCCGTGAAGATCATCCCCGGGAAGGTGCGCCCATCTTCACGCCCCCACACCGAGGCTCATCCACAGGTATTGATCATTGCTCCCGGTATCAAGCGGAGTCAATCTGAGGTG # Right flank : CTACTGCCGACCCACCACTGGAAGTGGTCACCAGCCTGGGTGCGGTTCCGAGCAATGATCAGAACCTGTGGATGAGCCTCGGGGTGGGGGCGTGAAAGTGGGCGCACCTTCCCGAGGATGATCTGAATGTCAGTAGGTCCGATCATGAGCCGGCGTTGGCGCGCTGGTTCGGGAAGGTACGCCCATGCTCACCGTAGTTCACGACGCCGAGGACGCCAACGACAGCGACACTCCCGGTCGCTCGTTGTTGGATGAGATCGTCCGCGACGGGGCGCGACGGATGCTGGCCGCCGCGTTGCAGGCCGAGGTCGCCGCCTACGTGGCCCAGTACGCCGACCAGCTCGATGAGAACGGCCACCGCCTGGTGGTGCGCAACGGCTACCACCAGCCCCGCGAGGTGCTGACCGCAGCCGGTGCGGTGCAGGTCAAAGCGCCGCGAGTCAACGACAAACGTGTCGACCCCGACACCGGCGAACGCAAACGGTTCTCCTCGGCGATCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGCGGTTCCTTCGGGAGCCGCTCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 3 400449-400051 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 400448 36 100.0 35 .................................... TGGAGCAACCCTCTCGCGGAGAAGCCGCTTGAAAT 400377 36 100.0 36 .................................... TGTCTGCGTGCCGTTGAATCGGTAGCGGACCTGCCA 400305 36 100.0 37 .................................... CATAGGCCTCACTGGCATCCTGGTCCGCAGCGTCCCG 400232 36 100.0 36 .................................... GAAGAACAGCGCTGGCCCGACGGATTTGAAGTTGGC 400160 36 100.0 38 .................................... TTCGGACCCATCAACCCACCCTATCCGGGTGCGCTGGC 400086 36 91.7 0 .................................GAG | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 98.6 37 GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Left flank : TCGACAAAGCCCAGGTCGCGGTCAAAGCCTTCGAGGTCGACTTCGGCGCCAAATATCCCAAGGCGGTCGCCAAGATCACCGACGATCTGGACACCCTGCTGGAATTCTACCGCTATCCCGCCGAGCACTGGATCCACCTACGCACCACGAATCCGATCGAAAGCACCTTCGCCACAGTGCGTTTGCGCACCAAAGTCACCAAAGGTCCGGGGTCACGAGCAGCTGGTCTGGCCATGGCCTACAAGCTCATCGACGCCGCCGCGGCCCGCTGGCGCGCCGTCAACGCACCACACCTGGTCGCCCTGGTGCGCGCCGGCGCGGTCTTCCACAAGGGCAAACTGCTTGAACGCCCCACCGAGATCACCCCACCAACCCCGCCCTCAGACGGCGATCAGCAAGCCGGAACGGAGGTCGCCTGAAACACCCCGATCCACAGGTCTTGACAATTCCTCGAACCGCACCGGCGATCGTCCCTGATGGTGTGTGGCGGAAGCTTCAGG # Right flank : GAATTGTCAAGACCTGTGGATCGGGGTGTTTCAGGCGACCTCCGTTCCGGCTTGCTGATCGCCGTCTGAGGGCGGGGTTGGTGGGGTGATCTCGGTGGGGCGTTCAAGCAGTTTGCCCTTGTGGAAGACCGCGCCGGCGCGCACCAGGGCGACCAGGTGTGGTGCGTTGACGGCGCGCCAGCGGGCCGCGGCGGCGTCGATGAGCTTGTAGGCCATGGCCAGACCAGCTGCTCGTGACCCCGGACCTTTGGTGACTTTGGTGCGCAAACGCACTGTGGCGAAGGTGCTTTCGATCGGATTCGTGGTGCGTAGGTGGATCCAGTGCTCGGCGGGATAGCGGTAGAATTCCAGCAGGGTGTCCAGATCGTCGGTGATCTTGGCGACCGCCTTGGGATATTTGGCGCCGAAGTCGACCTCGAAGGCTTTGACCGCGACCTGGGCTTTGTCGATATCCTCGGCGTTGTAGATCTCTTTGAGCGCTGCCAACGCCGACGGGTGTG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 402377-401981 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 402376 36 100.0 36 .................................... CTGAAACTGACCGACTTTGACGTTCTCGTCCTTGAA 402304 36 100.0 37 .................................... CCGGGCACACACCCACACCATGCGAACGAGACTCAAT 402231 36 100.0 38 .................................... TGAGGCCTCAACTAGTTGTTTGATGGGCCGGTAGTTGG 402157 36 100.0 36 .................................... TAGTGACGATGTGTTCCATACCAGCTCGTCAACGTG 402085 36 100.0 33 .................................... GAGAATCCGGGACCGCACCTGGAGAAGTACTTT 402016 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 99.5 36 GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Left flank : GCGATCAAGGAGATCTACAACGCCGAGGATATCGACAAGGCCCAGATCGCGGTCAAGGCCTTCGAGGCCGACTTCGGCGCGAAGTATCCCAAGGCGGTCGCTAAGATCACCGACGACCTCGATGTGCTGCTGGAATTCTACAAGTATCCGGCCGAACATTGGATTCATCTGCGAACGACGAATCCGATCGAATCCACCTTTGCCACAGTGCGTTTGAGGACCAAGGTCACCAAGGGGCCCGGATCACGAGCGGCCGGACTAGCGATGGCCTACAAGCTCATCGACGCCGCCGCGGCCCGCTGGCGTGCCGTCAACGCCCCACACCTGGTCGCCCTGGTCCGCGCCGGCGCGGTCTTCCATAAAGGCAGACTGCTCGAACGACCCACCGACATCACCCCGCCAACATCGCCCTCAGACGGCGGTCAGCACGCCGGAACGGAGGTCGCCTGAAACACCCCGATCCACAGGTATTGACAATTCCTCCTCTGGATCTTCTTCCA # Right flank : AGCAATGATCAGAACCTGTGGATGAGCCTCGGGGTGGGGGCGTGAAAGTGGGCGCACCTTCCCGAGGATGATCTGAATGTCAGTAGGTCCGATCATGAGCCGGCGTTGGCGCGCTGGTTCGGGAAGGTACGCCCATGCTCACCGTAGTTCACGACGCCGAGGACGCCAACGACAGCGACACTCCCGGTCGCTCGTTGTTGGATGAGATCGTCCGCGACGGGGCGCGACGGATGCTGGCCGCCGCGTTGCAGGCCGAGGTCGCCGCCTACGTGGCCCAGTACGCCGACCAGCTCGATGAGAACGGCCACCGCCTGGTGGTGCGCAACGGCTACCACCAGCCCCGCGAGGTGCTGACCGCAGCCGGTGCGGTGCAGGTCAAAGCGCCGCGAGTCAACGACAAACGTGTCGACCCCGACACCGGCGAACGCAAACGGTTCTCCTCGGCGATCCTGCCGGCCTGGGCGCGCAAGTCTCCGCAGATGAGCGAAGTGCTGCCGCTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGAGCGGCTCCCGAAGGAACCGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 5 403908-405326 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 403908 36 100.0 37 .................................... GGGGATTCTGGTGGCGTTTCCGGTCGCGTTCACTGTG 403981 36 100.0 35 .................................... ACGATGCGCCGCTGCACCGGGTGCGGTGCGCACTC 404052 36 100.0 36 .................................... GGCTACGGCAAGCCGGTCGACGAGAACGACCCCGAT 404124 36 100.0 39 .................................... CGGAAACTGATCATCGAACACGAGCACGGAGAACTGGGG 404199 36 100.0 40 .................................... GCGTTGGTGGCGTCGCGGATCGCACGGGTCTCGGCGCCGG 404275 36 100.0 38 .................................... ATCCCGAGGCGCCGGTCCGGTGTGACGGTTTCGACGCG 404349 36 100.0 37 .................................... GGAGCGCATAGCGATCGATGCCGCGACACACGTTCTC 404422 36 100.0 39 .................................... TCGTCATCTGTCCCCCCGATAATCAGCACGGTGATCGAA 404497 36 100.0 34 .................................... GGCGATCATGATGAGAATGTCGCCGGTTTGGTGG 404567 36 100.0 36 .................................... CACGTCTGCCACGGCTGCGCCGTAGCCATCATCAAC 404639 36 100.0 38 .................................... ACGTCAGATCTCCTTCTTCCAGTTGTGCCGGTTGCCCT 404713 36 100.0 39 .................................... GCTCGTCGTCGACGCGGTACAACTCGCGGACCTTGCCGG 404788 36 100.0 36 .................................... GACGGTCGTCAGTTGGTGTGGGTGAGCGCTGATCCC 404860 36 100.0 35 .................................... ACAGACAGGATGGCGATACCGATGCGTTCGCCCGG 404931 36 100.0 39 .................................... GAGCAATTCGGTCAGCGCCACCCGGGACTGCATGCGGGC 405006 36 100.0 35 .................................... AACGAAAGAAGGCCGCCCCGGGGAGCGCGTTGGGG 405077 36 100.0 37 .................................... TCGCCACCCGAGGGTCAGCTCGGGAATTGCATCGTGA 405150 36 100.0 34 .................................... TTGATCATTTCCATCTCTCCCATCTGGTAGGTGC 405220 36 100.0 35 .................................... AGGCGAAGCACCAGTTCCCAGCCGGCACTGAAGCG 405291 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 20 36 100.0 37 GGTGCGGTTCCTTCGGGAGCCGCTCTTCATTGAGGC # Left flank : CTTGCGCGCCCAGGCCGGCAGGATCGCCGAGGAGAACCGCTTGCGTTCACCGGTGTCGGGGTCGACACGGCGGTCGTTGACCCGCGGCGCTTTCACCTGCACCGCGCCGGCGGCGGTCAGCACCTCCCGGGGCTGGTGATAGCCGTTTCGCACCACCAACCGGTGACCGTTCTCGTCGAGTTGATCGGCGAACTGCGCCACGTAGGCGGCGACCTCGGCCTGCAACGCCGCGGCCAGCATCTGCCGGGCCCCGTCGCGGACGATCTCATCCAACAACGACCGACCAGCACCGCTGGCCTTGTCGTTGGCGTCCTCGGTGTCGTGAACTACGGTGAGCATGGGCGTACCTTCCCAACCAGCGCGCCAACGCCGGTCTTGATCGAATACCTGATTCCGTGAAGATCATCCCCGGGAAGGTGCGCCCATCTTCACGCCCCCACACCGAGGCTCATCCACAGGTATTGATCATTGCTCGATCCAGAGCCTCGACGAGGTCAACG # Right flank : CGTTGACGCGGAACCAGTCCGTCAGCACATCAAACGGGTGCGGTTTGTCGTCTGCCATGAGGATGGGACCAGTGTGACCTGATTTTTGCCAGGGTGATGGGACCACCTGGATTGCCAGTTATGGGACCACCGGCGCGTCGCGTCGGTGGTCTTTTCGTTTGTTCGTTCGATCGGTCGTGACGGCTCAAGTCACGGAGGTCGGCGGGCATGGCTTTTCGGGAGGTCAGTGTGAATGAGATCAGAGAAGTGTTACGGGTGTGGCTGGGGGTCGCGGGGTTGCCGGCGCCGGGCTATCGCACGATCGCCGCGCATTGCGGCCTGGACCGCAAGACGGTGCGGCGCTATGTCGAGGCCGCCCAGGGGGCCGGTCTGCGCCGCGACGCTGATCCCAGCGCGATTGATGACGGCCTGATCGGGTTGGTCGCCGAAGCGGTGCGTCCGGTGCGCCCTGATGGCCACGGGGCGGCGTGGGAGCAGCTTTTGGGGTTCGAGGATCAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGCGGTTCCTTCGGGAGCCGCTCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 6 879291-879441 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 879291 29 100.0 32 ............................. TTCAATGGCGGCGGCAGTGCGCAGGCGTATGT 879352 29 96.6 32 ............................C GTGCTGTGCCAAGTCGTGAAACCCGGGCCGTG 879413 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGCAGGCGGGGGTGATCCG # Left flank : TAGGCCTCAACGAGGTCGGCGTCGGTGACTGGGGCGGCCAGCCAGCGGTAATACGGTTGGCGGGCGAGCTTGAGTACCCGGCACGTCACCGCGACGGGGATCCCGTCGGCGGCGAGCTCTTTCACGAGCGGGTAGAGCCTTTTCCCGGCAGGTTGGCCTGTGACAGATACGCCGCGGCCCGGCGCAGCACCTCGTTCTCCAGCTCGAGCAGCTTGATCCGACGCCGGGCCTCACGCAGCTCACCGGACTCGCTGGTGGTTCTACCGGGCTTGGTGCCCTCGTCGATGTCGGCCTGGCGAAGCCATTTGTGCAGCGTCATCGGGTGCACACCGAAATCGGTGGCGATCTGCTCGATCGTCACACCGTCTTCGCGGTTGCGGGCCACGCGCACGACGTCGTCGCGGAACTCACGGGGATAGGGCCTTGCCATGGGGACATCCTTCCAGCCTGCCCACGCTGGACAAGCCAACTCAGATGTCACCTGTTCGTGCAGCAGACCC # Right flank : ATCCCTGGTTTCAGCGCTCAACGGGCTCTCCCGCTGGCGAAAATGGTCACCCGCAGCTTGCGTTCCTCCCGTCCAGTTGGCCTGCCGCGCCTTGTGCTCCGTGCCGACGCGCTGCACGATATAGTCGCCCTTATCGAAAACGCAACGGGATGTGTTTCAGGAAGTGGCCGATGACTGTCGCGGGATCAGATCAGGATGCCGGGGTGGAGTTCGATCCGTTCTCCGCCGAGTTCTACGACGATCCGCACGCCATCTATCCCCGACTGCGCCGGGCGGCTCCGGTCTACTACAGCCGCAGACACGACTTCTACGCGCTGAGCCGGCACGCCGATGTCGCTGCGGCGTACAAGGACTGGGAGACCTTCTCGTCGGCCTACGGTGAGGACCTGGGCATGGTGCGCCGGGGTGAGAATCCGCCGGCGAAGATGATCATCTCCATCGATCCGCCCGAGCACCGGGTGATGCGCAGCCTGGTCAACAGGGTCTTCACCCCGCGGGCG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 5082587-5085875 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026975.1 Mycolicibacterium hassiacum DSM 44199 isolate Mhassiacum chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 5082587 36 100.0 37 .................................... TCGTCGCTGAAGGGCATGTGATCGATGCCACCGAAGC 5082660 36 100.0 38 .................................... GAGAACGTCGCCAACCCGGCCAGCCAGCACCGGTACGA 5082734 36 100.0 37 .................................... CCATCGCTCGGCTGATCTCGTGCGGTTCCAGCATTCG 5082807 36 100.0 42 .................................... CAGGATTGACCAGACCCAACTCGATGCCGAACGTCAAATCTC 5082885 36 100.0 39 .................................... GAAGGTCTCGACGGCGCGTTGTGCGGAGCGGCGGGACTT 5082960 36 100.0 37 .................................... GCAACGGAGTCGTGCCACAGCAGGCGATCGCGGCGCT 5083033 36 100.0 38 .................................... CTCGTAGGCCGCGCGCTGGGCCTGCTCGTGGGAGTCGA 5083107 36 100.0 37 .................................... ACGCGAAGCACATCAATGAGGCGTGCGATGTCACGCC 5083180 36 100.0 41 .................................... ATAGTGCAGCGCTGTGATCCGAAGGTTCGGCCTCATGTGAC 5083257 36 100.0 39 .................................... ACGGTGTTCATCCGCGCGCAGCGGCTCGGGGTCGCGCTC 5083332 36 100.0 37 .................................... CAAGACGCACTACACCCTGCCCACCGATGGCCTGGCT 5083405 36 100.0 36 .................................... TACAGCGCCGACATGATGGTGACCTTTTTTGTCAAC 5083477 36 100.0 36 .................................... AAGGGGGTGGCAGCATGATGAACACTGAACATTCGA 5083549 36 100.0 37 .................................... TTGAAATTGTCTGCGGCACCGGGCATTACGTGTTCTC 5083622 36 100.0 37 .................................... GACCTGCCCATTCATCTGTCTAGCGCCCTTGACTAGA 5083695 36 100.0 37 .................................... TTAGCGTGTTGGTGTGGTCGAGGTCGCCCACCACATC 5083768 36 100.0 38 .................................... CTCTGTGTCCGCACACGCACACGCTCACAGCTCGTCCA 5083842 36 100.0 39 .................................... CCGAAGTCGCCTGGGCGCGACGCCGAACCGTACCACGTG 5083917 36 100.0 41 .................................... GACAGATGCGAGATTCGTATCCCGCCCACCTTCTCTCTGCC 5083994 36 100.0 40 .................................... CCGAGCTGCGCGGCCTCGAATGGAGTCGCGTCGACCTCGA 5084070 36 100.0 42 .................................... CTGGCCGAGGCGCAACAGGGCACTTGGAAGAAGCTCACTGGG 5084148 36 100.0 35 .................................... GGTTGTGTCCGAGCCGATTCCGGTCACCCAGAACG 5084219 36 100.0 39 .................................... GCGCGCCGGCAGGTAGGCGCGGTCTGGGTGAGCGGTGTG 5084294 36 100.0 38 .................................... CCGATGACACCACCGTCTACATCGGCATCGACTGGACG 5084368 36 100.0 41 .................................... CTGTACATGCTTGGTGTGGCGGCTGAGTCGCTGCGCCGATG 5084445 36 100.0 37 .................................... TCGGGGCAGGTCCTTGACGCCGCCCTGTCACTTCAAG 5084518 36 97.2 38 .....................G.............. CTCGCCAACAGTCAGATGGCGTTTCCCGATGGCATGGT 5084592 36 100.0 39 .................................... TTCGAGGATGCCGCTGACGAACGTGCGACCCAACTCGGA 5084667 36 100.0 36 .................................... GACCGACCTCGTGCCGGTCGTGCAGGGCGAGAAGAT 5084739 36 100.0 37 .................................... GAGTTGCCGGAGGCGGGGTCGTGACAGCGGCTGTGTT 5084812 36 100.0 36 .................................... ATGGCAAGGCATGCGCGCATCCTCGAATACGGCTCG 5084884 36 100.0 40 .................................... CTGCGTCGAAGACGGGCTGATGGAGTCCGCACCGAATGGC 5084960 36 100.0 40 .................................... CCGAAGATCGGGTGCACCCCGGCGGCTCGGCAGGCCTTCT 5085036 36 100.0 37 .................................... CAGCAACAACATTGCCGGACGCAACCGTGGGCTCATA 5085109 36 100.0 35 .................................... CTGACGCAGCCGCCGCACCTCATCAGGGTCCATCC 5085180 36 100.0 40 .................................... CTGGCGAGCACATCGTCCAGTTCGGCGAGTTCCAGATCGG 5085256 36 100.0 40 .................................... GCCGGTACTCATCGCGCTTGTCCGGCGGGGTCTCGTCGAT 5085332 36 97.2 37 .................C.................. CGAGTGAACCGCACGTGATCGGGTTGGAGGGATGACA 5085405 36 100.0 35 .................................... TCGTTCGGCCAACCCAGGTCTCCGTTGGCGTAGGT 5085476 36 100.0 36 .................................... AAAGCCGCTTCTGCCGCAAGCGGTGGTGGTGTTAAC 5085548 36 100.0 37 .................................... CAACGAGCATTATGGCGGCAAGCGCGGCAGGTTTCGG 5085621 36 100.0 36 .................................... CTCGGTGACGGCAACCGCGACAACAACGGCCGTATC 5085693 36 100.0 36 .................................... TGGCAGCCGGCGCCGACAGATCGCTGTAGTAGAAAA 5085765 36 100.0 39 .................................... GGGAGGTGCCCGATGACCGCGCGCGACGTGATCGATTGG 5085840 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 45 36 99.9 38 GCTGCAATGCGGCTCCGTCTCAGGGACGGAGATCAC # Left flank : CGCCAGCGCGTGGCGGCGACGTCTTGCTCCTCGAATCGGCGGCCGAGGTTGCGCCGGGTTCGGTCAGGCGGAGATCGGAATCGCCGCCCTGGTACCGGCGCGGGGGTCTCTGCGTCCGACCGCGCCGACGGTGGTGCTGCTGCTGGTGGTGGCCCTGGCACGTCGCCAGCCAGACGGGGTTGTCGGCGCGCATCCCTGCCGGCCCGTCGGTGAGCTTCGCGGCTACTCTTTCGGTGCTCCGGTTCTGCAGCCCGGCGACGCGCTGCGGGTGTCCGGCAGCGCGTGCCGTTCGGGTTCCTGCTCGAGGCGTTGTTCGGGATCGGGTGCGGCTTGATCGAATTCGGCAAAGCGCTCAGGTTCAGCCGCGGCCTATGCGCAATGTGATCCTGCCGAGTGCTGCCGCAGTTCCTGGTCTGCATATAGCAGGGCCCGGGCGTTTCGCCGCCTTAAGAACGGGGATTGCTCGTCGGTGGCATTGTGGGCACCGCGGGCGCTGGAAC # Right flank : CAGCTGCGGAAGTTTACCACACTTCACCTGCATCGATCGGCGTGTCCGCGAGAGGTGGTTCATGATGCGGTCGGTGGCCACACAATCTTCTTCACTATGGAGTTGGAAAGGTGCTCTGAGCTGCGTGCGAGTGGTTCCCGGGGCTTGCGCACCGCAAGGAGCGTTCGCTAAAGGATGATCGGACCACTGGGAGGCAATTGGCGGGGGACACCAATGGTGGCGACTGCCGGCGCAGCGTCGCACCGGCCGAGGTCGACGTGGATGACCGAGTCTGCTCGGAGATCCACCGCTTTGTGGATCTCAGACCGCCACCGAATCAGTTCCAGCTCGGACAGATCGCACAAAAAGACCGAGTACTGCAACCGAACTCCGTAGTCTTTCATGATCGTACAAACGCGCCGGAGTCGTTTCGGATTTCGGATGTCGTAAGCTATGAGATAGCGCCGTCGTGCCATAGATCACCGGGTTGTCATCGGGCTATATTGCTCAATCTCACCCAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCAATGCGGCTCCGTCTCAGGGACGGAGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.10,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //