Array 1 7340-4665 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQJ01000002.1 Capnocytophaga canimorsus strain 13232B-6 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 7339 36 100.0 30 .................................... TTTTTTGGAAACCAAAAGAAAGCAGGTTTG 7273 36 97.2 80 .....T.............................. CAAAACCGCAATTCTCAACAACGACAAGGCGTTGTGATTACCCTCCAAATCTTGCATTCATGAGTTCCTTTGAAAAAACA 7157 36 66.7 77 A.AAAA.C.CA.GAAT.................... TCATAGCACCTATGGATCCACATTCAGCCTGTTGTTATTACCCTCCAAATCTTGCATTCATGAGTTCCTTTAAAAAC 7044 36 69.4 82 AA.AAA..CT..GAAT.................... CCGTGGGCAAAGAGCGAAAAGGCACAGTAAGTTGTTATTACCCTCCAAATACTTCGTATTCATGAGTTCCTTTGAAAAAAAA A [7033] 6925 36 63.9 79 TAAAAA.C.CA.GAAT.................... GTGATATACCCGAGAAATGGTTCCGAATGCGTTGTGATTACCCTCCAAATCTTGCATTCATGAGTTCCTTTAAAAACAA 6810 36 66.7 30 A.AAAAC..CA.GAAT.................... AAAAATAATTTAAGATGTACACAAAAACAG 6744 36 100.0 30 .................................... TCAGAGATTTTGTAAAAAAAGAGCTTCCCC 6678 36 100.0 30 .................................... TTGTGTGGTTGCCTTATGATATTTGGATGC 6612 36 100.0 30 .................................... GATTGATGGACTGGCAAGATTGCTGGGATG 6546 36 100.0 30 .................................... AGATGAAAACATTTTACTGGGAGCAAAACG 6480 36 100.0 30 .................................... TTGAAGTTTTTTGGAATCTCTATGGCTATA 6414 36 100.0 29 .................................... TTATAGAAATGCATCTGGATATGCAGAGC 6349 36 100.0 30 .................................... CTAGCTCTTCTTTCAGTCTTTGTTCGATGT 6283 36 100.0 30 .................................... AACGCCTGAAACCTTTCTTGCTGCGGCATT 6217 36 100.0 30 .................................... TAATGAAGTGGAGACACTCTCTACATCTGC 6151 36 100.0 30 .................................... ATACAATGTATCTCCCTCAAAATCCTCATA 6085 36 100.0 29 .................................... TCTAACATTCTGAACGGCGAATTTGATTA 6020 36 100.0 30 .................................... TAAACAGCATTACTTACAAGGTTTTGGAAG 5954 36 100.0 30 .................................... AGATGATTTTGTAGAATACAAATTAAATAT 5888 36 100.0 30 .................................... TATTTTATTTATAGCATTATCAAAACACAC 5822 36 100.0 30 .................................... GAAAATCATTTGGAAAAATTAGAAAAACTA 5756 36 100.0 30 .................................... TAGAGTGGTGGAAGAGTTTAAACAAAATGA 5690 36 100.0 30 .................................... GAATTATGATTTAAAAATTTTCTTTATATA 5624 36 100.0 30 .................................... TATTCTTCGATAGTCTTCGTGTTTAGAGTC 5558 36 100.0 30 .................................... AATGCAAATGAACGCCTCAATAATACCTAA 5492 36 100.0 30 .................................... AATAAATACGCCTTTGTCAGAGGAAAAATA 5426 36 100.0 30 .................................... GAACTTTGACTATTGAAAATTCAGCGGCTA 5360 36 100.0 30 .................................... TTTTTCGAAAAAATGACCAAAGCCGTAGTA 5294 36 100.0 30 .................................... TGAGCAGACTCACCATTCACTTGCAATTCT 5228 36 100.0 30 .................................... ACAATGATACAAACATTGCCGAATCTATGG 5162 36 100.0 30 .................................... TTAGTGTCCCCTGGGATCGTGTGGTTGACA 5096 36 100.0 30 .................................... TGGGGAGCGTTTTTGTAGATTTAAAATTTA 5030 36 100.0 30 .................................... GTTAGTATCCGTGTCTTTACTTTTGTAATA 4964 36 100.0 30 .................................... AAATATGGCTTGTTTATTTGAGAGAAATAA 4898 36 100.0 30 .................................... TAAAAATACTTCTTGGAAGTTTTGAGAGAG 4832 36 100.0 30 .................................... ACAAAACAAAAAATAAAACGAATGGAATTA 4766 36 100.0 30 .................................... ATTTGTTCCGCAACCCTATCAGCCAAATCG 4700 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================================================== ================== 38 36 96.4 35 GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Left flank : AAAAATTTGGTAGTTTCAAAAAAATTCGTACATTTGCAACCGCATAAGTGAAACAGCAAGTGCGATTGGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGGGTAACACCTCCGGGGGTTCGAATCCCTCTTTCTCCGCAGTAAAGGGTGTAAATCAAGTAGTTACGAGATTTACACCCTTTTTTACACCCAAAAATATCGAATGATTTTTTATTTCTTCCCCAAATTGTTCATATTTTTACCAGAACTATGGTTTTAAATTTTCAGATTGGCTCAGAACTAGGCTTTTGAATTAAAAACTTCAATCCATATCTTACTCAAGATATTAAAAATCAAATAATTACAAATAAAATTCTTATTGATTTCCACACGTGTTGTCCCAATAATACAACCCAAAAACATAATTTGCAACACTTTTAACTCAAAAACAGAAAAATAAAGACCTCCCGATAAAGTACATCGGGAGGTTTTGCGTTAAAAACAGAC # Right flank : CTCAATACTAAAAAATGAGTGTATAAAACTGTCTATCAGGAGTGTAATATCTTATATTTTACTTTATCAGTGCTTCTTTTTCCCTTTTAAATACTTCGGCAAAGTACTCGGCATAGGTTTTTTCTTTTTCTATTTTGCCGTATTTTTCTTGACAATAGTCCCAAAATTCTTTTTTAGGCAATTGGTTGTGTGCAAATTTATTACGAATATAGGTTAAAACAAAGGCTTTTTGTTCTAAATCGGTTGCTTCTTGTTTTAGTTGGTTAATGTTCACATCTTCAGGTTCAGTATTTAAGTTGAATACCTTATAACCATCCACATTTTCATTTTTAAGCTGCTTTAAAAGTCCGTTGAGAATGTAGTATTTGAAATTTTGATTACCCTCTTTTTTTAATATTTCCTTATCTTTCACCTTTTCCAAAATATATTCCTCTATAAGGTGGACTTCCTTCAGCAGTTCTTCCCTTCTCACTTTTTCATATTGCTCTATTTCTCTTTCT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.34, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-51] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 1 2030-60 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQJ01000021.1 Capnocytophaga canimorsus strain 13232B-6 sequence21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2029 47 100.0 30 ............................................... TTTGTGTTATTTTATTTTTCTGAAAGCATT 1952 47 100.0 30 ............................................... GGATTTAATGGTTGAACAATACTATTTTAT 1875 47 100.0 30 ............................................... CTATCTTTAAATATAATAGCTGGGGATATT 1798 47 100.0 30 ............................................... TCATCAGTTGCCTGTCTATTTTGTTGCTGC 1721 47 100.0 30 ............................................... CAACGCCGCAGTGAGTTCTTCACCTATGCC 1644 47 100.0 30 ............................................... TATAATTAATATATAATGTTAATAATGAGA 1567 47 100.0 30 ............................................... GCAATGGACAGAAATAGACGCTCAAACCAA 1490 47 100.0 30 ............................................... AGCTCCATTTGATGTGAGGTTACCTAAGCA 1413 47 100.0 30 ............................................... TTATTTTTATATGTATTGATTGTGTGTAAC 1336 47 100.0 30 ............................................... TAGAATTGTTTTTATCCATTTTAATCACCT 1259 47 100.0 30 ............................................... TCTCATGAATTGGGATTCTTTCAAAGAATT 1182 47 100.0 30 ............................................... TCACTATTTTTTAGCATTTCGCCTTTGCCA 1105 47 100.0 30 ............................................... TTCGCACGTGAATACATCTACCAGCTGTAT 1028 47 100.0 30 ............................................... AGTTTTCATTGAGACCAATTTAGAAATAGT 951 47 100.0 30 ............................................... CCTATCCGTAGCTCCTACTTTTTCGAGAAA 874 47 100.0 30 ............................................... GATTGCTTTGCAGGTATTGGAGGGTTTCGC 797 47 100.0 29 ............................................... TCGTGTCTTCGCCCTAATTCCTGACCAAG 721 47 100.0 30 ............................................... AAGTTCTTGTGTGGTCGCTCTAATTTCGGC 644 47 100.0 30 ............................................... TGGATTATATTCGTATGGGACAAGTTCTGA 567 47 100.0 29 ............................................... TATGCCACAAGAGCTTCCAAATTGGTATT 491 47 100.0 30 ............................................... TCCAGTGCATCAGCCCCAGCATATGGACGA 414 47 100.0 30 ............................................... GACACTATTTTTGGGCTTATCTTGGTTTTG 337 47 100.0 30 ............................................... CTTTCCAAGTTTCATCAAAATCAGCAGTTA 260 47 100.0 30 ............................................... TTATCTGTGCGTAAAATCAAACACAGGTTA 183 47 100.0 30 ............................................... TGATAAACTATTGATATATCTTAATATCAA 106 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 26 47 100.0 30 GTTGTAACCAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGCGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGACTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTAAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTCCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTCAGCTCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGTTTGTCAGAGGATTATTTTTTGAG # Right flank : CAGGGCAATCTCAAAAGAGTGTCGTGATAAAGTTGTAACCAATCACAAAGTTACGAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACCAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 1919-327 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQJ01000003.1 Capnocytophaga canimorsus strain 13232B-6 sequence03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================================================================================ ================== 1918 47 76.6 77 .AGTGCT..C..A.....T...C...............A........ AACTATGTATCTGTTAAGGCAAAAGGTTTTGTTGTAAATTGCTTTACTTCATTAGTTTTTTTTCAATGGTATTCAGT A [1905] 1793 47 74.5 77 .AGTGCT..C..A.....T...C..............GA........ AAGTATTTTTTCGGATAAAGGATAAACGCTGTTGTAAATTGCTTTACTTCATTAGTTTTTTTTCAATGGTATTCAGT A [1780] 1668 47 76.6 30 .AGTGCT..C..A.....T...C...............A........ AATGGTGTGTTATCTTCTTGAGCTTGATGG A [1655] 1590 47 97.9 30 ......................................A........ TTGCCCCCCTTCGTTATGAATTTGTGCGTA 1513 47 97.9 30 ......................................A........ TCAGAGGGTATATCAGCTTAATCATATAGT 1436 47 97.9 30 ......................................A........ ACAAGTACAAGATTGGCTGGATAGGTATCA 1359 47 97.9 30 ......................................A........ GGGGAAAACTTACCGAATAACTATTTGGGG 1282 47 100.0 30 ............................................... ATATATTGTAATGCAGATGTCGTTAAGTTT 1205 47 100.0 30 ............................................... AGAAACATTGGATTTTATCAAAGAAGATAT 1128 47 100.0 30 ............................................... ATCTTTCATCAAATCCATTAATAATAGTAA 1051 47 100.0 30 ............................................... TTATAAATTTATAACACTTTGTTATATAAA 974 47 100.0 30 ............................................... AAAAATATATTTAATCATCATTGATATAGA 897 47 100.0 30 ............................................... ACATATAGCCACTGACACAGTTAAGACTAT 820 47 100.0 30 ............................................... AAATTGTTAAATCCGTAGTTGATTATATGA 743 47 100.0 30 ............................................... ATCCGTTCCTGATGAACGACCGTTCCGATA 666 47 100.0 30 ............................................... TTGCTTTAAATACATAACTAATGATTACTT 589 47 100.0 92 ............................................... TTAAAGACGTTATTGGAGGATTTGATTGCTCAAAAAGTCAATAAGGAAGAAAATAAGGGCTTAATCTCTGATACAGAACGAACACTCATTCA 450 47 100.0 30 ............................................... AAGTGGAAGGCGAAGTGGATACCGTGCCTC 373 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================================================================================ ================== 19 47 95.8 39 GTTGTAAATTGCTTTCAAATTTTCGTAACTTTGTGATTGGTTACAAC # Left flank : GCGGCTACCTCCGCACGGGTAAATACGTAGGCTTCATCGTATTCCATTTCGATATTAAAATGGGCGAGCATTGTAGCAATATGATTATCTTTCTGGGTTTTACTCTCCAAAATGGGTTTAAAGTAACCTACCTTGGGAGTATTACGCATAACCATTTGCATCACCCCTAAACTTACCAACGACTTGCCGCTATAAGCATCAGGAGTGATTATATAAACCGATTTATTCATTGTTTATAATTAAAATTTATTAAAAATGATTAAACAGATAAGTAAAAAATTCCTTTTCAATAAAGAAGTATGCAAATTTAGGAATTCTTTTTGCAATGAAAAAGTAAAATCATCGAAATCTTTATAAGTAAAACCATTGTTTTATATCAGATTTTTAGAACTTGATTACAAGGCGGATAAAGACAACGAGTACCTTATGGGGCTTTTCCCCAAGAACGTTGTAAATTGCTTTACTTCATTAGTTTTTATTTTTTTTCAATGGTGTTCAGT # Right flank : CCGATTTGGTTTTGCTTCCCTGCATATGCTCGTTGTAAATTGCTTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTGATTGGTTACAACATCATCAATAATTTTTCCATTACTATCTTCGTTGTAAATTGCTTTCAAATTTCCGTAACTTTGTGATTAGTTACAACAGTGCCAGGATTAGAAAAAGACTTGAAAGAGTTGTAAATTGCTTTCAAATTTTCGTAACTTTGTGATTGGTTACAACTCTTGTAGGAAAGTTTGTAGGAAAGTGTAGGTTGTAAATTG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.59, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAAATTGCTTTCAAATTTTCGTAACTTTGTGATTGGTTACAAC # Alternate repeat : GTTGTAAATTGCTTTCAAATTTTCGTAACTTTGTGATTAGTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-37] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 62-1340 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQJ01000033.1 Capnocytophaga canimorsus strain 13232B-6 sequence33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 62 47 100.0 30 ............................................... GTGATTCTGTGGCTGCCGTAAAACAATTTG 139 47 100.0 30 ............................................... CCCATTTGCTTAAATATCTACATATTAACG 216 47 100.0 30 ............................................... TCAGTTCCATAGCCGAAAGAACGGAAAAAT 293 47 100.0 30 ............................................... GCTATTGCCTATTGCCTCAAAAATAAATAA 370 47 100.0 30 ............................................... CACTGGTGTATTGGCGTCGGTGATTGAATC 447 47 100.0 30 ............................................... AGTATCATATGTGTAAAAAAAATGGACAAT 524 47 93.6 30 ........C...............A...T.................. ATATGGACAGAGGTGGGAGAGAAGTTTCCA 601 47 93.6 30 ........C...............A...T.................. TATGGACATTGCGTTGTTCCACTCAGCGTA 678 47 97.9 30 ........C...................................... TAGAGATATTGATTTAACTAAAGAAGATAT 755 47 100.0 30 ............................................... ACGCGTGGAAGTGCATTGAGGTGAGCTTTG 832 47 100.0 30 ............................................... CAACATCTCCTCCAGCTCATCCTTCACCTC 909 47 100.0 30 ............................................... TAATAAACATAATCCAAATACGAATGGATA 986 47 100.0 30 ............................................... GCTCTTGCCTGTATTCTTTTTGAACTCTAA 1063 47 100.0 30 ............................................... TTATTTTGCTATTACATTTAGGAGGTTTTT 1140 47 100.0 30 ............................................... CCTCCAAACCATCGGCACCCATCATATACC 1217 47 100.0 30 ............................................... TTGTTTGTAGATGAAGTCTTTGTCATAGGT 1294 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 17 47 99.1 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : AAGTTACGGAAAATTGAAAGCAATTTACAACCTTATTGGGTTTGGGCTCTCTTACAAAAAAG # Right flank : GGGTCTGATAAATAATCGTTAAACAACTTAGTTGTAACTAATCACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGCAATTTACAACTATGGTATTTAATAAGATATCACTATCAAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCTACCATCAGTGGTATAAACGTAAGTTAACGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACGCAAGGATGTTAACCTTCTTATTAGTAATAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTCGGCACAATACTTTGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 1504-1704 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQJ01000033.1 Capnocytophaga canimorsus strain 13232B-6 sequence33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1504 47 100.0 30 ............................................... CTACCATCAGTGGTATAAACGTAAGTTAAC 1581 47 100.0 30 ............................................... GCAAGGATGTTAACCTTCTTATTAGTAATA 1658 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Left flank : GTTACGGAAAATTGAAAGCAATTTACAACGCTCTTGCCTGTATTCTTTTTGAACTCTAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTATTTTGCTATTACATTTAGGAGGTTTTTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACCCTCCAAACCATCGGCACCCATCATATACCGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACTTGTTTGTAGATGAAGTCTTTGTCATAGGTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAACGGGTCTGATAAATAATCGTTAAACAACTTAGTTGTAACTAATCACAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGCAATTTACAACTATGGTATTTAATAAGATATCACTATCAAA # Right flank : TTCGGCACAATACTTTGAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //