Array 1 1568168-1568685 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP021074.1 Burkholderia glumae strain 957856-41-c chromosome 1, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                                                                                                                                                                                                            	Insertion/Deletion
==========	======	======	======	============================	===========================================================================================================================================================================================================================	==================
   1568168	    28	  89.3	    32	...AT......G................	GGGATCTCGACGTATCCGTTTCGCATGACGCG                                                                                                                                                                                           	
   1568228	    28	  89.3	    33	...AT......G................	CTCGCGGTAAGTCATGCCGCGTCCCCGTTCGAG                                                                                                                                                                                          	
   1568289	    28	 100.0	    33	............................	TCAGGGCGACGTCAGAGAATCCTGTTGAAGCGC                                                                                                                                                                                          	
   1568350	    28	 100.0	    33	............................	TGCACGCACTGGCCGGTGCCGTGTGCGCTCGTG                                                                                                                                                                                          	
   1568411	    28	 100.0	   219	............................	ATGCTCGACGCCGCTCCCGACGTATTCGCCCGCCGTATTGTTGGCTGGCGCGTCAGTTCGTCGATGGCCACGGACTTCGTTCTTGATGCGCTTGAACAGGCGTTGTACGCACGCCAACCAAACGCCGACGGGACCTTGATACATCACTCCGATAGGGGGTCTCAATACGTCAGCATTCTCTACAGCGAACGTTTGGCCGAGGCGAGTATCGAGCCGTCC	
   1568658	    28	  67.9	     0	..CG..A......GC.A.....AC..T.	|                                                                                                                                                                                                                          	
==========	======	======	======	============================	===========================================================================================================================================================================================================================	==================
         6	    28	  91.1	    70	GTTCGCTGCCGTGTAGGCAGCTTAGAAA	                                                                                                                                                                                                                           	       

# Left flank :   TTCCGAGGCGGTTTTCACCAGCGTGCGGAACGCCGCCGCGTCGAGCGGCTTCGGATTCTTCTTGTCGCGCCCCATCGTCCAGGGGCCGACCAGCGCCGGCTCTGCCTCGCCGTCCTTGATCATCGCGACGGCCCAGCCGTCGTCGTCCTCGTTCTTGATCACGCGCGCGGTCCAGCCGCTGTCGTGCCAGAGGCCGTCCTCGTGGATCGGGCTGTCGTCCTGGGCTGGGTCGGTATCGGTGGCGTGGTCGGTCATGAGGCGTCGGGCGCGGGTTCGGGGGCTTGGGTGGGCGGCTATTGTAAACGTTTCGATCGGCGGCAATGGTGCGCGCCGCCGCAGCTGGCCGTGCGGCCGGGTGGTGGCTGCTGAACCCTTTTTTCGGCAGAATGCGCGAGGGGCTGCAAAATCAATGGGTTAGCGAGAGGCGGGAAATTTGGGGGGTGCGAGGTGTCGGGCGGGAATTGGTTTTTGAATCAAGGGGGTAGGTGGGTTTTTGTTCA
# Right flank :  AACGCGCTGGCTGAAACGATCAACGGCCTGTACAAGACGGAACTGATTCCCGCCCGCCGAGGCTGAGGCAAACTACTACAGGCAACTCAGAAATGCTGCTGAAGTGCCTGCATCAACTTAAACCAACCGGCCTCCACGATTCCCGGTGCGGTTCACTCGCTTCGAGCGACGTGCCTACATTCACGAAGCATTCCTCAAACTTGGCTGCTCGATCATCTGTTGGAACATCTTCAGACGAGCTGAGCAGGGTTTTTGAACTGGCCTCTAAGTGGTTCAATGACAGCAAGGGTTTTGGTTTCATCACGCCGGACAACGGCGGCGAAGATCTGTTCGCGCACTTCTCCGAAGTCAGCGGCGACGGCTTCAAGACACTCGCTGAAAATCAGAAGGTCAGCTTCGAAACGAAGCGCGGCCCGAAGGGCATGCAGGCGGCTAACATCAAGCCGCTGTAAAGGTTGAAAAATCGGCACCTCGCCACAGGTGCCGAAGTACCGCGACAC

# Questionable array : NO	 Score: 5.85
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGTGTAGGCAGCTTAGAAA
# Alternate repeat :   GTTATCTGCCGGGTAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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