Array 1 6048387-6046891 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYXC010000001.1 Streptomyces pactum strain ATCC 27456 Spactum_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 6048386 30 96.7 31 .............................A TGCGAGAGGGCCCGCCGCTCCGGTGGCGGGC 6048325 30 96.7 31 .............................A GTAGCGCGTTACTACTCCGAGAACAACCACA 6048264 30 96.7 31 .............................C GTCTTGACACTTTCTCCGGGGGTCCCTACCT 6048203 30 100.0 32 .............................. AGAACAACGCCAGGGGGAGCCACGCCCCCACT 6048141 30 96.7 31 .............................C AGCAGGGGCGGGGTGCGCTCCCCGGCCGCGT 6048080 30 96.7 31 .............................T GGGTGCCGGCGGCTCGGTGCTCATCGAGCAG 6048019 30 96.7 31 .............................A GGAAACTCGGCGAACGGCTTGCGAGGGCAGC 6047958 30 96.7 31 .............................T CGCCGACCCGCAGCACCCGCCGCGGCGGGTG 6047897 30 100.0 31 .............................. CCCCGGGGGTGATCTTGTCGCCGACGCTGTC 6047836 30 96.7 31 .............................C AGTCGCTCAGGGGGCCGATGTCGCCCTTGAT 6047775 30 93.3 31 ............................TT GAGCCGGGCACCGGTCTTGGCGGGAATCGGA 6047714 30 100.0 31 .............................. TGGACTCAGCGGGCGGAGTGGAGTCGCATGT 6047653 30 96.7 31 .............................A GCATCGCGCCGAGAACCGCCCGCTCCGCCTC 6047592 30 96.7 31 .............................C CTGAGCCGCCCACGGTCCCTGCCCAGAGCGG 6047531 30 96.7 31 .............................A CCGCGCGGGTCCCGGGCCGACCGGTCATCCG 6047470 30 100.0 31 .............................. CGGCCAACGCGCTCCAGGACGAGCGGCGCCA 6047409 30 100.0 32 .............................. GCAACGGGGACGATCAGAACGCGTTCCTGGAG 6047347 30 100.0 31 .............................. GATCAGAAACAATTGTTTCCAATCCGGGGTC 6047286 30 96.7 31 .............................C AGTTGATGCAGTACGCGCGGCAGGTGCTGGA 6047225 30 96.7 31 .............................C TGGTCCACCTCCTGGTCCAGGGTGGGCAGGG 6047164 30 100.0 31 .............................. GGTGGCCCTGGCCGTGCTCTGGGAGGCGGTC 6047103 30 93.3 30 ............................GC GTGAGGGCCATTGAACCCCCGGACGGCCCG 6047043 30 96.7 31 ...................T.......... CCTGCATGGCCTCCGGCAGGGTCTCCATCTG 6046982 30 96.7 31 .............................C TCCAGATCGATACCGGCGAGCTCGAAGGCAT 6046921 30 93.3 0 ......................C....T.. | C [6046904] ========== ====== ====== ====== ============================== ================================ ================== 25 30 97.2 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CGGCGGACGCCTGCTCGACGGCGGCCGCAACTACGGGGACGAGCCGATCTGGTGACCGTCATCGTCCTCACCAACTGCCCCGCGGGCCTGCGCGGGTTCCTCACCCGCTGGCTCCTGGAGATCTCTCCCGGCGTCTTCCTGGGCTCGCCGTCCGCCCGCGTCCGCGACATCCTCTGGGACGAGGTCCGTCAGTACTCCGGCCAGGGCCGCGCCCTGCTCGCGTACCAGACCGACGAGCAGGGATTCACTTTCCGCACCCACGACCACGCGTGGCACCCCACCGATCACGAGGGCCTCACCCTCCTCCACCGCCCCGCTGCCCCCTCCCGGCCCCGGGCGGAAACCGACCCACCGCGCCAGGGATGGAGCAAGGCGGCGAAGCGGCGGAGGTTCGGAAGATGAGGCGAGGCAGGAGGAAATCCGTTATGACTCTTTTGCAAGCTTCCATGGAAGTGGGTAAAAACCAGCTGCACTTGCGGTAAAAGCGCAGGTCGCCTCCT # Right flank : CGTAGGAGGAAGAGCGCGTGCGCTGCGGGCGCGCCGGGTTCCTGCGGCTGCGGTCGGCGGCAGGCGGCTGCCCTTGGCCCGCCCGGTGGGTTGCGGACCGGCAGCGGCGTCCACGGTCCGCCGGCGCACCGGCGGACCGGCGGGCTCAGGCCCGCTGCCGCCAGTCGGGGTCGAGGCGGTCGGCGAGGCCGGCGGCGGTGAAGGCGGCTTCGAGGTCGTCGCGGCCCTCGGTGAAGTGGGCCCAGCTGTCGTGGTGGACGGGGACGACCCGGCGGGCACCGAGGATGCGGGCGGCCTCGGCGGCCTGGGCGCTGTCCAGGACGAGGGGCTCGCCGCCGTAGAGCACGGGGATGCGGGGGGCGCCGGCGAAGAGGATGGCGGTGTCCACCGGGGCGAACCGCTCGGCGATCTCCTTGACGGCGTCCAGGGAGGCGTTGTCGCCGCTGACGTAGACGGTGGGCAGGCCGTCACCCGTGAGGACGAAGCCGACGACCTGGCCG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6739187-6739399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYXC010000001.1 Streptomyces pactum strain ATCC 27456 Spactum_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6739187 30 100.0 31 .............................. ACACCCTCGACGAACTCGGGCCCGGCGCGCA 6739248 30 100.0 31 .............................. ACGCGCCGGTCATCCAGAAGATGAATGACGA 6739309 30 96.7 31 .............................A CGGTCTGGCAGAAGCAGGGGCAGGAGCAGAG 6739370 29 86.7 0 ...............A.-.....TT..... | A [6739397] ========== ====== ====== ====== ============================== =============================== ================== 4 30 95.8 31 CTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACCTGCTGCTGTTCACCGCGGCCCACCCCACACCGGGTGCCCCGCCCGGTCTCCGCCCGACCCCGCGGACCTGGCGGCCGTACGTGACGGGGCGGGTCATCACCCACACCGTCCCCACCACCCACGCCCGCATGCTGCGCCCGCAGGCCCTCACCCGGCTCGGCCCCCTCCTGGCCGCCGGCCTGGACCACCAGCACCCCCAGGACGATGCCGACTCCTGACCCACCCTCGTGGCGGGGCCGGTGACCTCCTACGGAGAGGAGCCTGGCTCCGGCACGTCCCGGTGAGCCCGCCGGGGGCCGACCGGCAGGCCCCCGACGGTCGTACGGTCGCCCACCGGCCGCATCCGGGACGGCGGACGGGCCGCGCCGCCCACGGCCGTGCAAGCCGGCGGCCCGGCGGGCGATTCGCCGCTTTCATGCGCTTCAGTGCAATTGCCGGAGTCGGTGAAAGTGGTGAGAAACAGCGTGGGCGCCAGGTAAAGTCCCAGGTCGCGTCCT # Right flank : GTCCGGCCGCCGGTCGGGAACGCCGGCGGCGTCCGCGGCGCGTATGAGTCGGGGCCGGTGGGCCACGGGGACCGACGGGCGGCCGGTTCCTCCGCCCGGAGGGCCAAGACCGCCCGCCCGGCGGGCCCCGCTCGACCGGCGGGCGCCGGTGCGACCCCCTGCTTCCGTGCGCCGTGGCCGGAACCCATCACACCGGAGACCAAAGACCTGATGGTGCGGCAGAATGTCACCGTGGTAGGGCACATTCCGGAAGAGACGACCAGCTTCGTGGGGCGGGAGGCCGAACTCGTCCGGCTGGAGGAGGCGTTGCCGGACCACCGGCTGGTCACCCTGACGGGGACCGGCGGGGTGGGCAAGACGCGGCTGGCGCTCCGGGCCGCGCGCCGGGTCGCCTCCCGGTACCCGGACGGGGTGTGGTGGGCGGACCTGTCCCCGCTGGACGGCGACCGGTTGCTGCTGGCGGCCGTCTCGGACGCCGTGGACCTGTCCGACCACTCCCC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //