Array 1 938665-933480 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSPC010000008.1 Streptococcus equi subsp. zooepidemicus strain SEZ_14-131 tig00000158, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 938664 32 100.0 33 ................................ TTGATGATTACAAAGATATTGCAAAGGATATTT 938599 32 100.0 34 ................................ AGAATGACGAAGCCTCTTAAGAATGCTATGAGAG 938533 32 100.0 35 ................................ TTAAATGGGCAACTCACTTAACAAAAAAAAAGAGA 938466 32 100.0 33 ................................ ATCTTTGGGCATTTCTGTGCCACCGTAAACAGT 938401 32 100.0 34 ................................ TTGGTACTCGTGTAGTCTCACACCCAGTTCTCCA 938335 32 100.0 33 ................................ TCAGCAATTAAACGCATACGTTCGTCATCATCC 938270 32 100.0 34 ................................ TATAGGATGTTAAATTTCAAAAAAAACGTTAGTG 938204 32 100.0 33 ................................ ATGTAAATCCTTTCTAGTTTTGTAGGTACTCTT 938139 32 100.0 34 ................................ GTATAAAATGGCACTCACTTTTTCTTTATCCAAA 938073 32 100.0 35 ................................ AACTTTAAGCCCATTTTTTTGATGGTCGATTGACT 938006 32 100.0 34 ................................ TAGAACTTCTTTGATTTTAGCAAACGGAACTCTA 937940 32 100.0 34 ................................ ACCTTTTTAAAATCCACACTCGCCCTAAAATTGT 937874 32 100.0 34 ................................ TATGACGTTAATTACCTTAAGCGCCGGTCCGATC 937808 32 100.0 34 ................................ TAAATTTTGCCATTGTTAATTACCTCATTTTTAT 937742 32 100.0 35 ................................ TGTCTCAATCAGATACCTAGCATACCGAAAATGCC 937675 32 100.0 35 ................................ TCGAACAGATAGGGTTGCCATTTCAAATGTTTTAT 937608 32 100.0 34 ................................ AGTTGCTTCAATATTTAATAGCAATGTTGAACCA 937542 32 100.0 34 ................................ TGAAATAAGAAATGCTTTCGCAATGTCGCCTTTT 937476 32 100.0 34 ................................ TTGCAACAAAGGTACTACAGAATCAAGATAAATA 937410 32 100.0 35 ................................ CTTTGATGCGACTATCTAAAATCTCAACAAAGTCG 937343 32 100.0 34 ................................ ATTTTCTTTCACTCTCCCCCCCTCACCCTAAATA 937277 32 100.0 34 ................................ TAAAATATCAGTGTACTCAGACATCACACGTCTC 937211 32 100.0 35 ................................ AAAACCAAGAGTGCCTTGAGCATATTTTTTAAGCA 937144 32 100.0 35 ................................ AACTTCGAAAGAACTATCCTGATCAACGAGTCCCA 937077 32 100.0 35 ................................ AACTTCGAAAGAACTATCCTGATCAACGAGTCCCA 937010 32 100.0 32 ................................ TAGGTACAGCGTATTGAGTTATCCAAGTTTTT 936946 32 100.0 34 ................................ CAAGCGACTGGGATACATGTGGTAAGATACCACA 936880 32 100.0 34 ................................ TAGTCTCGTCAGACAAACCTCTGATGATGCTATA 936814 32 100.0 34 ................................ TTAAAAGATAATAAACTGATTCTATAACGCACAG 936748 32 100.0 33 ................................ AGATTTTTATATTGTTAAGTGGATTATTGAAAA 936683 32 100.0 33 ................................ CGTAAAATTTTCTGCAATTGATGAGTCAGCAAG 936618 32 100.0 35 ................................ CTCTTAAATATATTATGATAATTTCAATAAAAAAT 936551 32 100.0 34 ................................ AACATTATAAAGCTCAAACTTCAAGTTACTTTCA 936485 32 100.0 34 ................................ TATGTGCTACGAACAACTGCTCACGAGTTTGGGC 936419 32 100.0 34 ................................ AAAAAATATATTTATAAAAAACAAGAATCCCATA 936353 32 100.0 34 ................................ AGATTTAACTGTGATGTATGCTAAGATAGCTAAC 936287 32 100.0 34 ................................ CTACAAACGTTACAGTTAAAGATAAGTCAGCTAA 936221 32 100.0 35 ................................ CAAAGTTAAAGCCAGTCAATGCAGATACCCCTCTC 936154 32 100.0 35 ................................ TTACTACAATTTGATTATCACTGTTACTAAAGGAG 936087 32 100.0 34 ................................ GTCCAGTAATCTTTGCATCTCCTCTTTTGTTCCG 936021 32 100.0 34 ................................ GCATGGACGTCTTTTTTTGTTACTCCAAATCAAC 935955 32 100.0 34 ................................ ATTTTTAAAAATTTGTAATTCCATGTTATTTTCC 935889 32 100.0 34 ................................ TGCAAAAAAAGCTTCAATGCCATCTCTTAAAGCT 935823 32 100.0 34 ................................ TGACAGATTAAACAGCTTCATCATAGCTTTTTTC 935757 32 100.0 34 ................................ GCTCGTAGTGCTCGCTGCTATAGTCATGCCCGAT 935691 32 100.0 33 ................................ TTATTATTGATAACATACTTACCAAAACCTTGT 935626 32 100.0 34 ................................ TAATTTCATGCCATCTACACATTCTATCAGGAAT 935560 32 100.0 35 ................................ TCCAGAATACCCGTTCCGTGATAGTTATTAAATAA 935493 32 100.0 36 ................................ TTGCGCCTCATCAATGATAAGTAGGTCAAATCCCTC 935425 32 100.0 34 ................................ TAATTGCGATGGAGATACTGTTCCAGAGTTTTTA 935359 32 100.0 35 ................................ TTCTTCGACGGAAGACACATGGGAAGTCATGAAGT 935292 32 100.0 34 ................................ TTTGGTGGAGATCAGTCGATTAGTCGTGATGGTA 935226 32 100.0 36 ................................ TTGATGATTACAAAGATATTGCAAAGGATATTTTAT 935158 32 100.0 34 ................................ AGCAACGGGTTGTTAGGAGGCTGATCATGACTAA 935092 32 100.0 35 ................................ ATTTGAAAAAGCTACAAAAAAGTAACTAGTGCATC 935025 32 100.0 33 ................................ CAGAAACAATTATTGAGGACATCTATAATAATC 934960 32 100.0 35 ................................ TAGAGTGAGAGATGAGTTGTAGATACTCGTTTAAT 934893 32 100.0 35 ................................ CGACCGCAGCAGATAAGCTGCTAACTCGTCGCGTC 934826 32 100.0 35 ................................ CCAAGACTCACGAGACTGAACAAAGGTGGCCTCTG 934759 32 100.0 34 ................................ AACCCTTGATTTGAATTAGCGGTCAAATAATTTG 934693 32 100.0 34 ................................ TTTAGGCCTGTCACAACCCCCGCCACAGTCTCCT 934627 32 100.0 34 ................................ TTCATCTACTTCACCCCCTCTCTCCAGAACAGAT 934561 32 100.0 33 ................................ TTGTGCTCTTTAGCAAAATATGATGATGTTAGA 934496 32 100.0 35 ................................ TAATGCCCAGCGATCTTCTGGATTCATCAGCAACT 934429 32 100.0 33 ................................ ATAATTTTAAAGTAGAGTATTCACCTGTGTTAG 934364 32 100.0 34 ................................ ACACTATCCATAAGGTTAGGTACAATCTGTTGCG 934298 32 100.0 35 ................................ TTTTAGTCGACTATAAAACTTTTAGTAAAGCCCCA 934231 32 100.0 33 ................................ TTGTTTAGGACAGAATAGGTATTGCTGCTCTGA 934166 32 100.0 34 ................................ TATTGAGTGCTAAAAAGGAGATAATTAATGGCAA 934100 32 100.0 34 ................................ CTTGGGGTTATGGTTATAAGACCCCGCACTATTG 934034 32 100.0 33 ................................ TTGTTGTTTTAAATATTGAATCTCATTTTCCGT 933969 32 100.0 33 ................................ ACAACGAGTGAATGACCATCGATAGCTTCATCC 933904 32 100.0 34 ................................ AGGTTTTTGGTTGGTCTTTTTAGCCCCTTTTGGC 933838 32 100.0 34 ................................ ATCAAGAGCTTTTAACTGTGCATTAGATAGCCTA 933772 32 100.0 34 ................................ TCAAAGCAGATGATGGTGTCTTTTGTAAACGATA 933706 32 100.0 33 ................................ TAAGATGATGAATCGTGCAGGTTCATCTTTTTG 933641 32 100.0 34 ................................ TGACAACAATGTGCAAAACACAATAACTTGACCT 933575 32 90.6 32 .....................T........TA TGCGATACGTGACTTTACGATGTTGCGACTCC 933511 32 68.8 0 ........C..TG....T.C.T..T.C.T.T. | ========== ====== ====== ====== ================================ ==================================== ================== 79 32 99.5 34 GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Left flank : AAGGCTATTCGAGGGGATATTGATAGTTACCCACCTTTTATGATTTAGGAGACTGGTTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCAGCAGGGCGAAAACGACTACGTCAGGTAGCAAAGTTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCATTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATCACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA # Right flank : CTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGACTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCCGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //