Array 1 192884-195795 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849177.1 Acinetobacter proteolyticus strain NIPH 809 acLZO-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 192884 30 96.7 30 ............................G. ATAGACCTTCCTATCTGGATTATTGTTTTT 192944 30 96.7 30 ............................G. TTTCACTCAAAGAGTAAAAACTAGATTCAA 193004 30 96.7 30 ............................G. TCATGAGACTTGTCGAAATCGACTTTTCTC 193064 30 96.7 30 ............................C. GCGATTTGGAGTGTGTGAGATGGGTGTAGT 193124 30 93.3 30 ............................TA AGCCAATTTCAAACATAGATTACCCCACTA 193184 30 100.0 30 .............................. TTGATCGAAATTGGATTAAAGAAACTCGAT 193244 30 96.7 30 ............................T. ATTGGTTTTAGTTATGAACATCGTATTTAC 193304 30 96.7 30 ............................T. ATGTCCAGATCAAGGCATCTCCAGCAAAAT 193364 30 96.7 30 .............................C CATCAAAGTAATTGGCAAAATCCAATAAAA 193424 30 93.3 30 ............................TG TGGAGCAAGTTTAGCAATTGATATTGATCG 193484 30 93.3 30 ............................TA ATCAACTTCGCATAATGAAGATTGATGTTA 193544 30 93.3 30 ............................TG AAAGGTGAGACATCATATCTGATTTATATT 193604 30 93.3 30 ............................TG TCAATCATAGGGTTTTTAGTGGTTGTCTAT 193664 30 93.3 30 ............................CG TGCAGTGACTAGCAAATACGAGTGGATAGC 193724 30 96.7 30 .............................A TCATAGATTAAAGGTCTTGAATATGGGATT 193784 30 96.7 31 ............................T. GCTTATGCTAATGCTGCGCTTGGCGGTTGGT 193845 30 96.7 30 .............................A TGGGAACAAGAAGCACTTGAAGCTCGACTT 193905 30 100.0 30 .............................. TTGCATTGTTAATGACTTAACCAATAACAA 193965 30 96.7 30 .............................G TTTTCACCCATGATCTGGAATTGTCCCCAA 194025 30 96.7 31 .............................A TCAAATTCATGCTCTCAATGAAGAAGTTACT 194086 30 96.7 30 .............................C CAATCACCATTATCAGCAGCGAAAGTATGT 194146 30 93.3 30 ............................TA TGAGCCTGTATATGTCCCTCAGCCTGTCAA 194206 30 96.7 30 ............................C. TGGTTGCTTCCTCAAAAGCCTCTCGTTCTT 194266 30 93.3 30 ............................TA ACCAAACTGTAAAGCGCAACTAATTGCAGT 194326 30 96.7 30 ............................T. TCCAAGATAAGCACCCATGCCTGTTGATAA 194386 30 93.3 30 ............................TC TGGAAATAAGCATTGGTGAGTTTTCCACGA 194446 30 93.3 30 ............................CC GTTCCCCGCACCTTCAGATTTTTTCGGTCA 194506 30 100.0 30 .............................. GACGTATCACAAGCTGATTGCAAACGCTTG 194566 30 100.0 30 .............................. CCGGGATAAGTTGATTGCCATTAATCAAGG 194626 30 96.7 30 .............................C ACCAATTAAAACCGATACCCACAAAGCCCA 194686 30 93.3 30 ............................CA TTGAAGGACGGGCACCAATTAGAACTAAAT 194746 30 93.3 30 ............................TG ATATTTCACCGATGTCTTTATCGCCACGGC 194806 30 100.0 30 .............................. TACCAAACGTGACTCAAGTGACGGAGAAGG 194866 30 93.3 30 ............................TG TTCGCTGATCAGTTAAGTCTGCCAATTTCG 194926 30 93.3 30 ............................TA GACGTATTCGTTATCGCAACATGAACGGTC 194986 30 96.7 30 .............................C TGTTTGTTGCATTATCGAATGCTAAACGTT 195046 30 96.7 30 ............................G. TTCCGTGTTGTACTGGTTGTATCGATTGAT 195106 30 96.7 30 .............................C CAGCCGCGCCCTCTTCAAACGCGTTGTCAT 195166 30 96.7 30 .............................A TAACCATTTGCCCAAATCTCAACCCCAGCA 195226 30 96.7 30 .............................G AAACAGGCGAACCATTTTTTAATGAGAAGC 195286 30 93.3 30 ............................TG ATTACGCTTCACTGAAGAATGTTCTTTTAA 195346 30 96.7 30 ............................T. GCCGTCAATATATTTCGGCTCAAAGATTGT 195406 30 96.7 30 .............................A CTTGGCAGTCCACGACGTTTAAAGACCATC 195466 30 96.7 30 .............................G CCTTTCGCGCTCTTCTTTAAGCCTTGCCCC 195526 30 93.3 30 ............................TA CGCAAGTCACGCATCGTGACTAAAAGTAAA 195586 30 100.0 30 .............................. ATTAAATCTATTACCCGTGATGATGTTTTA 195646 30 93.3 30 ............................TG GTCAGGCATATCCAGTGATTCTTTTGGAAT 195706 30 100.0 30 .............................. AAAAGGGTGGTCATCTGAATTAATGGTCAG 195766 30 76.7 0 ..................T.....TTTGTG | ========== ====== ====== ====== ============================== =============================== ================== 49 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : TTAATAAAATCAATAAGTTACAGCAAGTGGTTTTTTGATTGGGTAAAATGCCTAAATCTATATTAACTACTTGTTGTAACTTATATTTTTACTATAATTTTATAGTTCATGGCGGCATACGCCATTTAGAAAAATGCAAAATTACACACAAAAAGCAGGTACACGTTCATGGCGGCATACGCCATTTAGAAATTGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACAC # Right flank : GAGGCAGAGAGTAGATAGGTTAATTAATAAGAACTTACACACTCACTCTCTTTAATTTTTAACCAAGAAAATATACTCTGAAGCTAATGTAATTATAGTGAATAGTGAAACGTTCATGCGCGGTCTATACCTCATTACCAACGATGATCCAATCCAATTATTATTAGAAAAATTAGATGTGGCGCTAGCAACAGGACAAGTAGCTATTTTGCAATATCGCCGTAAGAAAGTGGCAAAAGCAGATCAGCCAAGTGAAGTCGAACAGATCAAAGTACTTTGTGAAAAGCATCAAGTCCCATTTGTGATTAATGATGATTTGGCTTTGGCGGAACAATTTGGATTAGGGGTACATCTTGGACAATCGGATGGTGAAATTAGTGATGCGGCCGCACGTTTACCACAAGGTGTAATTATTGGTCGGACTTGCCTAAATGCATTAGAGTTGGCGGAAAAGGCGATTGCGGATGGTGCAACTTATGTGGCCTTTGGTGCGGTTTATG # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1260201-1262507 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849179.1 Acinetobacter proteolyticus strain NIPH 809 acLZO-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1260201 28 100.0 32 ............................ TGCAAAAGGAGATTTTTCCATCCCAACCATTT 1260261 28 100.0 32 ............................ AGCGAGATAAATTCTCTACACGTGCAATAGAT 1260321 28 100.0 32 ............................ TTGAGACACTCGGAATTGATTCAGGTTTTAAA 1260381 28 100.0 32 ............................ TAGGAAGGTCTATACGGACATTACTGGGATTC 1260441 28 100.0 32 ............................ TACGATCAAATAGAGAACATTCATTATTTTTT 1260501 28 100.0 32 ............................ ATCAAGTAAAGGTGTGCAACTACTTACTGATT 1260561 28 100.0 32 ............................ CAAGCCAATCAGCAAAATTGCTGAAAACAGAA 1260621 28 100.0 32 ............................ AAACATATTTTTCAAATGGTAACAGCTTGTCT 1260681 28 100.0 32 ............................ AACGGGCTGCGGAAAGGGTTATGTGGCTGGTT 1260741 28 100.0 32 ............................ TATAGGAAGAATACAAAATGAAGGCACTGAAT 1260801 28 100.0 32 ............................ ATGACAGGGGTGTTGAACTCATTGTTGGTGGT 1260861 28 100.0 32 ............................ TGATTGATCGTAACGCAACGCAATCTGCAATT 1260921 28 100.0 32 ............................ TGCGAACTCACTGCCAGTTATTACCAAAGAAC 1260981 28 100.0 32 ............................ TCCACCCGCTGCACCGCCGTAGCCAATCACAT 1261041 28 100.0 32 ............................ TAATATTTCCTCTAAACGCTGTACTATGCCGT 1261101 28 100.0 32 ............................ CGATCAAACAGGGTATGAAGCGCCCTGTTATG 1261161 28 100.0 32 ............................ TACAAACAAATGCAAGCAGAATGGGTCAACCA 1261221 28 100.0 32 ............................ AAGCTTTTGTCGAGCCGCTTCACCTAGGCGCT 1261281 28 100.0 32 ............................ TCAATCAAATGACCGGCTTTCTTCATTTAAAA 1261341 28 100.0 32 ............................ TTGGGAAGACATGCTGGCTAAGTATGGTGCAC 1261401 28 100.0 32 ............................ AGATTTTGCGCTTCAAATCGAAGTGCTTCTTT 1261461 28 100.0 32 ............................ TTGCACCTGGTGATAAACCATCATCAATTAAC 1261521 28 100.0 32 ............................ AATAAAACGAAGCTTGCCGACGCTTATTGTTC 1261581 28 100.0 32 ............................ TGTGCGCCCATTCAAATAAAATTTCTCTAGGA 1261641 28 100.0 32 ............................ AGCCTCAAACACTTCGAAAAAAATTAACAAAC 1261701 28 100.0 32 ............................ ATGCATCTGCATCTTTAAAATGCAAAACACGG 1261761 28 100.0 32 ............................ TAATTTTAATCAATTTGATAGCACATCAACTC 1261821 28 100.0 32 ............................ ATCGAGATTTCACAGGCTTCAAGATGCTTTAA 1261881 28 100.0 32 ............................ AGAGACTTCTTCTGCTAATGCTGCATGTGCTG 1261941 28 100.0 32 ............................ TCAATGACAATGGCATGCCAGTCACCTACCAC 1262001 28 100.0 32 ............................ TAAACTCTGGCTAAAAGCTGAAAATCCTGATT 1262061 28 100.0 32 ............................ TGTTCGTACACATCGCTATGAATACAAGAAAT 1262121 28 100.0 32 ............................ TGAAAAGTGCACAGAATCAAGATATAAATTTA 1262181 28 100.0 32 ............................ TACAGATGTTGTTGAATTGCTAGATATGAGTC 1262241 28 100.0 32 ............................ ATTAAGGCTTTGATTGATTTTTGGTGGTCGAT 1262301 28 100.0 32 ............................ AGGCACAAAAAGATTCAGCTCAGACCATTCTA 1262361 28 100.0 32 ............................ GTTGAATAATACAGCCGAGCTTCTTTATTACT 1262421 28 100.0 32 ............................ TTTTTTTATTCATTATTAATTTAACTCTCTTT 1262481 27 85.7 0 ....................CA..-..T | ========== ====== ====== ====== ============================ ================================ ================== 39 28 99.6 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : GTAAATGCGATTTGTCTTTGTAGATTACTTATTTCAATGGTATCGGCATCGACAATGGTAATCTTGCCCACACCTGCGCGTGCCAATAGCTCGGCACTGGTACAACCAATCCCGCCTGCTCCGATGATCAGTACATTGGCGAGTTTGAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTACTTAGCTCAAATTCGTTTTCTAAATGGTCTGACACGTGAATTGCTTCTTTATCATCAAGGGTAATGCTGATTTTAAGTCGATGTCGGATTTGAGGAAAGTAATAAATTGGAACGAACACTGTTTTCTTTTGACAAAAAGCTGTTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACTATATCAGTTAAAAACTTTGGGTATTTCTGCCTTTTTGGATATAACTTGATGTTTTAGCTTATATTATCTTCATTATTTTATA # Right flank : TTAATGTTCAAATTGAAAATAAGATTTAAACTGAAAACCACGATGTATCAAAGCGTTTAAAGAAATGGGAAATCGAATTCTGGCAGTTTGTAGTACTTGAAGAACCCACGTTTTTTCGGCTAAAAATTCAAATAAGATCTTATCATCACATATCCTTGGGCCAGTAAAAATATCTGTCTGATAAACCAGCCCTATCCACAATGACTCCAACAATATATTTTTATTCAGATCGACTAAGGCCAAAGTTAAAGTTTCCTCAAAGACACAATCATGGGTAAGGAAAAGTAGATAGCAGTGAGAATATACACAAACCACACCTTCTAACACTTTACCCTCAACCACAACCCCTGTCTTTTTTCCCTTCACCAAGACTTCAGACTGGGGCAAACTTTTATCTGTCATATCTTGGATCAATGCTAAACCAATATAATCAGCCACATACATATTCAACTTTGCCTAATAAAATGATTACCGATTATATTTCCATCTATTACTTTGAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //