Array 1 2935724-2934231 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHJS01000002.1 Schaedlerella arabinosiphila strain DSM 106076 000000F_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2935723 32 100.0 35 ................................ CGGCTTCCTACGTTTTCCCGACCGGGCAATCCCTG 2935656 32 100.0 34 ................................ CGTGGGATCGGCACTTTTACGATCAATGCTTTGC 2935590 32 100.0 36 ................................ ATTACAGAATACATTTGGATCAGCGCTCTACAGCAT 2935522 32 100.0 34 ................................ TAAAGAAGTCTGCTCAAAGCTTACTTCATATCCC 2935456 32 100.0 34 ................................ TGCCTTAATGGCATATGTTCCAACACTGCATAAA 2935390 32 100.0 35 ................................ GAAAAATAACTTTGAATGAATATCAGTACGTCTCT 2935323 32 100.0 34 ................................ CATCTGTTTGGCATGCGCTTCCATCGTTGCATAG 2935257 32 100.0 35 ................................ CACAATTGCAAAGGCTCCATATGCATGCATGTTTC 2935190 32 100.0 34 ................................ GGTGCTGGCGTGCATTTTAATGGAGCGGCTGGAA 2935124 32 100.0 34 ................................ ATTCCGGCAGTAACAGTCCCGGCTTGTATCGCTG 2935058 32 100.0 33 ................................ TTTTGTATTTTTAGGTAAACAAAAAGCACCTGC 2934993 32 100.0 35 ................................ CCCTCTTTGTTGCTGCTGTATCCGCTCCCATCATT 2934926 32 100.0 36 ................................ TGGAAGTCATGCAGATGGAGAAACGTCAGGGGCGTC 2934858 32 100.0 34 ................................ ATCAAACCCAAAATGCGTGCATGGACGCAGGAAG 2934792 32 100.0 33 ................................ GGTAAGAATCGGTATAAAATATATTGCATAATC 2934727 32 100.0 34 ................................ GAGATTATCGGAGGAAAACAAAACAATGGCAATC 2934661 32 100.0 34 ................................ TACACAGTACGGCATCACTAAAATCTGATGTAGC 2934595 32 100.0 34 ................................ CTATAACATGACCGAAAACCTGGAAACTCTGATC 2934529 32 100.0 34 ................................ TGGTATATCTTCTCAGACAGATCATCCGAATCAA 2934463 32 100.0 35 ................................ AAGACGGCACTGCAGGACAGTAAAGAAGCAGATGA 2934396 32 96.9 34 ............A................... CGAGTGTCACCCTGGAAGCTGTTACGCCTGCTGC 2934330 32 100.0 34 ................................ TACTTATTATGCGATCAAACATGGGAAGGGCATC 2934264 32 84.4 0 ...........T........A.ATC....... | C,C [2934234,2934236] ========== ====== ====== ====== ================================ ==================================== ================== 23 32 99.2 34 GTCACTCCCTGCGTGGGAGTGTGGATTGAAAT # Left flank : ATATAGACGGTTATCCACCGTTTTTGTGGAAATGAGGGATTATGCTTGTACTAATTACATATGATGTAAATACGGAAAGCGCAAAAGGAAGGGCACGTTTGCGCAAAGTAGCAAAACAATGTGTAAATCATGGGCAGCGGGTACAAAATTCGGTATTTGAATGTATTTTAGACCCGGGCCAATGTAAATTACTGAAAGCACAATTACTGGAGATTGTGGATTTGGAGAAAGATAGTTTGAGATTTTACTATTTAGGAAACAATTATAAGAGTAAAATTGAACACTATGGAATAAAAGCCAGTATTAATCAGGAAGGGGTGCTTATTTTGTAGTGCGAACTATTAGTTTACATAGATAGGCGGGAGGTTCGCACTGGAAAAAGAAGAAAGAATGATAGAAAATTGGGATATTAAGAAATGGATTTTGTGAAGCAGGTATAAAAATTGTTAAGTTTTGACAAATGTGTGCAAGAGAAATTGGTATTATTGTGCATATTTGCT # Right flank : ATATACTAAACTCAAACTTCGCACTTTAATAAGTGCCTGTACCATGAAAATTCAATAAAAACTGGCAATAAAATAGCATGAAACCGTCTGGTTTGGTATAATTGAGTTGCCGAAAAACAATTAAAACCGGAGACTCATGCTATGAATAAAAGTATAACACAAGCAAACCAGAATGATAAGCAGATTTCAAAATCTATCGGAAAATTTTTAAAAAGATTCCATGACTCATTGGCATTGAAAGCATCTAATGCCTATAAGAAAAAAGTCATTCCCGTTATTGAGGTTTTTCAGTATCTTTTTCTGCTGATTTTTTCTACCAGAAGTATGCATATGAACCTGACCACTGGACGAAATACTCCCGGAGCAGTACTTGAACAAGTGAGCGGGAACAGGGATTCCGTAAGGGGACGTTTTCTTCTTTCTGTAATGTATGAAAGCAGCTCACGTATTAATGAGATTCTGTTATTAAAACGGAAAGACTTGGAATATACCGGAAAGGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTGCGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //