Array 1 100161-103827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFY010000007.1 Leuconostoc gelidum subsp. aenigmaticum strain POKY4-4 NODE_10_length_886079_cov_322.989746, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 100161 36 100.0 30 .................................... CTGTCCACAAATTTATATATGTTGATATAT 100227 36 100.0 30 .................................... ATATGAGTAGAAACTATCGTGTGTCTTGGA 100293 36 100.0 30 .................................... CGAGATTATGTTATTCAAAGCTGGAAGTTA 100359 36 100.0 30 .................................... ACTCGCTTGCATACTGCCTCAATGTATCGT 100425 36 100.0 30 .................................... TTGCTGTACGTCTCATGTCTTCAACGAACG 100491 36 100.0 30 .................................... TTGATGAACGTGAGAAGTTGGCCGTACTAG 100557 36 100.0 30 .................................... AGTATATAAAGACTGGAAACGCTACTCAGT 100623 36 100.0 30 .................................... GAAGTACCGTTAGTGTTTGGTGCGTTTCCT 100689 36 100.0 30 .................................... AAGTACTATAGATTTCATCACCCGTAACAT 100755 36 100.0 30 .................................... CTGCTGGTAAGTCTGATTATGCTTTCCTGC 100821 36 100.0 30 .................................... ATAGTAATGAGTCGTCATTCACAGATGACG 100887 36 100.0 30 .................................... CATTTATTTTTGACATGATTTCATTTGTAG 100953 36 100.0 30 .................................... CGCTGGTTACATCAATTACATTATTACCAG 101019 36 100.0 30 .................................... TAATTGGGTTCTTATCATCGGTTAATCCCG 101085 36 100.0 30 .................................... TGTAGGTGTTTTTGTTTTGCATTAACTTAG 101151 36 100.0 30 .................................... AGCTAAAATATCAGGAATGAAAGACAGTAA 101217 36 100.0 30 .................................... ACATGCAAATCACGTTAAACGTTGATATGA 101283 36 100.0 30 .................................... AAGAAAATTGATGAAAGAGCTTACGCTCAA 101349 36 100.0 30 .................................... TATTGTAGTCAGTGTCATCAAGGGTGCAGT 101415 36 100.0 30 .................................... TTTTGCCAAGGCGTTAATCGTCAATTTATT 101481 36 100.0 30 .................................... CGACCGTATTATTTATTTCGGCCATGTTGG 101547 36 100.0 30 .................................... GATTCCACTCTAGCCAATTCTAATAGTTCA 101613 36 100.0 30 .................................... TTGGCGCAAGTAACTTCACGGCACAATTCA 101679 36 100.0 30 .................................... ATGGTATATTAACTTGTTCTGAAAAGTATC 101745 36 100.0 30 .................................... TTCATTTACTGTTGGACAAGCAAATATTGC 101811 36 100.0 30 .................................... ACCAAAATATTGGTGAATCTGTTAAACAGT 101877 36 100.0 30 .................................... ATGAATTTGGGACTACACACGGCAGAGCAA 101943 36 100.0 30 .................................... AATATCAGTTTTTGCTTGGGTGGCTGTTTG 102009 36 100.0 30 .................................... TTCTGCTTGTCTTTTTCAAATGTCGCTACC 102075 36 100.0 30 .................................... GAGACCAAGCCCTACAAACAAGGCGATTCT 102141 36 100.0 30 .................................... TTTAAATGTGGGGGGTGTCATTATTTCGTG 102207 36 100.0 30 .................................... TTTCGTGTTTTCTTGCACGTAAGGCACATT 102273 36 100.0 30 .................................... GTTCGGCACCGATAATCTGACTCATGCTGT 102339 36 100.0 30 .................................... AACTGGGCGGAAATCAAACCCAAGATGATG 102405 36 100.0 30 .................................... TGTTGGTATGCCTAGTGCTTTCAATTTTAT 102471 36 100.0 30 .................................... AACCAAATTTGTACCATTGCCATATATAAA 102537 36 100.0 30 .................................... TGTTTTCGTCTCTCATTCCTGTAGTTTTAG 102603 36 100.0 30 .................................... CGCACCTTTTAATGCAGCCTGCTCAAACAA 102669 36 100.0 30 .................................... ATGAAGACGGTCTAAGCCGCCTTTTTTATT 102735 36 100.0 30 .................................... TGATGTAACTTTCCATCAACGACAATATCG 102801 36 100.0 30 .................................... CTCTTTCTCTATCTCTAACTCTATCTCTGG 102867 36 100.0 30 .................................... TAGACAAACGGCCATCAATACAGCGATTGC 102933 36 100.0 30 .................................... AATTTCTCCTTATAATACAACTACGCCAAA 102999 36 100.0 31 .................................... ACACCGTGTCATTAGTCGGCAAAGGTATGTA 103066 36 100.0 30 .................................... CCTCACTCTTACCACTACCACGACTACCTT 103132 36 100.0 30 .................................... GCTATTAACAAACACGTTCCAAATTCCTGT 103198 36 100.0 30 .................................... CAAGAGGAACTAATAGCAATGCCACTCTGT 103264 36 100.0 30 .................................... ATAAGACACTGTGCCTTTGCTGATTCCAGA 103330 36 100.0 30 .................................... TATGTCACCAGGATCATCACCGAATATTGG 103396 36 100.0 30 .................................... GTTCTTAGACATGATGGATAAGGAGTCATG 103462 36 100.0 30 .................................... TCCCAATAAGACTACTGATGTTGAATGTCC 103528 36 100.0 30 .................................... TTAAATCTTCTTCAAGTTGCTTATCTTTGT 103594 36 100.0 30 .................................... AACGCCGTAATCTTTATGGTACTGGTTACG 103660 36 100.0 30 .................................... GCCGTCATCATCAACATCACTAGATATGCC 103726 36 100.0 30 .................................... TCGAACTTTTCCCAACTATCAATCACTTCC 103792 36 94.4 0 ..............................C...A. | ========== ====== ====== ====== ==================================== =============================== ================== 56 36 99.9 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAACAATCTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAGGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAATCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : CTTATATACATGGCAATCTATATTGAAATTAAATACCATATTAATAAGATGAAAGCGCTTAGGCGCTTTTTATATGCCATATATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTTGTTTCAACAATAATTATTGGTAGCGTTCTGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAGCATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAAGTCTATTCAAGTACACCAAGCTAAATTTAAAACCGGTTCTGTAATCACATTGACTAATTCAGCAAAAACGTCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //