Array 1 139664-138235 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHMS010000008.1 Chitinophaga vietnamensis strain BD 01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 139663 47 100.0 30 ............................................... TACGATGAAATGCTGGAACGTGCCATATTA 139586 47 100.0 29 ............................................... CGCCGGCTATCGGTGTGATCGATATCACC 139510 47 100.0 29 ............................................... TTGCCCCTATGGTAGATGATCAATTCATC 139434 47 100.0 29 ............................................... TTATCTTGGTGTGAAGCCTGCAGAGCTTT 139358 47 100.0 30 ............................................... TACATGGTTTTCGTAATGTGTATGAAGCTC 139281 47 100.0 30 ............................................... GTTCAGGGCAGATACTTATTCCGAAGTTCA 139204 47 100.0 30 ............................................... TACATGGTTTTCGTAATGTGTATGAAGCTC 139127 47 100.0 30 ............................................... GTTCAGGGCAGATACTTATTCCGAAGTTCA 139050 47 100.0 29 ............................................... TAATAGATAAAGAAACAATACTCATAAAC 138974 47 100.0 29 ............................................... AAGCGATAAAATGTCATTAGCATTAAGAA 138898 47 100.0 30 ............................................... ATGCGTGGGCGGCGGGAATCCAATTGCGAG 138821 47 100.0 29 ............................................... ACCTGGAGACTACTGGTACCCTCTATTGG 138745 47 100.0 30 ............................................... AGCATATGCTTAATTTGAGTTATTTTTACT 138668 47 100.0 30 ............................................... TTCAAGAGGGGCCACCAGCCGCTCAATTTT 138591 47 100.0 31 ............................................... ATTATACAGTTAGGCCTTATAAACTAATACA 138513 47 100.0 29 ............................................... TGTCGCTTGCGTGAAACTTGATGGTCTTC 138437 47 100.0 30 ............................................... AGCTATCTTCGTAGCACAATGGCACATCTA 138360 47 100.0 31 ............................................... AGGCGGCAGCCAGATATCCATATCCAGCAAA 138282 47 70.2 0 ......C.A......G.T.....C....A.CACC.A....AG.T... | T [138237] ========== ====== ====== ====== =============================================== =============================== ================== 19 47 98.4 30 GTTGTTTGGAACCAAAGGTAATGTAAAGTTTGAAAGCAATTCACAAC # Left flank : CCAGGAAGCTATTATATCCGGTCATGCAAACGACATATTTAATTTAATATGAAATTTGAACGATTAAACGCCTATCGCGTCATGTGGGTACTTGTAATGTTTGATTTGCCTACGGAAACAATACAGGACAAAAGAATATATGCAAAATTCCGTAAAAACATTCTTGCGGACGGGTTCTCGATGTTTCAGTTCAGCATGTATCTTCGCCATTGTAGCAGCCGGGAAAATGCAGAAGTACATATTCAGCGGGTCAAAAGAATCCTTCCTGCTAAAGGTCATGTTGGAATATTAAATATTACTGACAAACAATTTGGTATGATGGAAATATTTCATGGCCAGGAGCAGGTGGGTACACCTGCTCCTGTACAACAACTGGAACTCTTCTAATACCAACATTAAAATTTTGCGGATTATAGCCATAAAAAAACGGGAGGATCTCCCGTTTTTTTATGCTGTTCCGGAGGCTAAACCCTCTACGGGCAGGCATTCCATAAAAGTCA # Right flank : ACAGAACAGGGCAAAGCGATAACCTACCCTAAACCATATTTATTACATGCCTTGAACCCTCTACAGTATACAACAGCCTATCTATAAAAACCTCTTAACTCCCCAAACTAATCATCTGTGAATACCACGTCTCTTTCAACATTTTCACCAGATGATTGAAATACTTATCGGACCCCAAGTTGGTCGATATCGCTATCTGCGCCGCCCAGTATGGTTCTGTGAGGTTGGTATCATCCAGCAGGCTAAAAATAGAAAGCTGATTGGTAAACTCTTTCGTTCCTTTCTTTTTGGCGGGGCGACCATAGTCTCTTAAAAAGATGTTATAAGCCAATGTGCGGTGTACGTAATCTTTCGTGGAGTCGGCCACAAATTCCGGCGCAATCACTAATATAGCATCATGTGGATACATCCTGGATGCTATTCGAATATTCTCATCAGTGACGTGGCTCACATCTCCCAGATACATTAGCGAAGAAGAGAACGCTTCGTTTTTAAGCTCC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTGGAACCAAAGGTAATGTAAAGTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //