Array 1 2311378-2316881 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015039.1 Rhodovulum sp. P5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2311378 36 100.0 31 .................................... GTGAAGATGCCTGCATCGTGGAACCTTCGCA 2311445 36 100.0 30 .................................... TTTGCGGCCGCTCAAACGCCCATTCTGCCC 2311511 36 100.0 30 .................................... GGCCAGCGCAATGGACATGTTCTCGGCAAG 2311577 36 100.0 30 .................................... TATCACTCGCAGGACATCTGCCCCGGCACG 2311643 36 100.0 30 .................................... GTTTCCTCGCCCACGGCTTCGCGGGCGTGC 2311709 36 100.0 30 .................................... GGGTTCCGCCAACGGGTGGAGGTGCAGTTC 2311775 36 100.0 29 .................................... TTTCGAGGCCGCGAAGCACAACCACTACG 2311840 36 100.0 30 .................................... AACGAGGCCGCGCTCGACGTGCTGCTGGCC 2311906 36 100.0 30 .................................... GCCGCCGTTTTGCGGCCAACTTCTCGCAGA 2311972 36 100.0 30 .................................... GCCGATTGCGCTGATCTTGCCAGTCGGGGC 2312038 36 100.0 30 .................................... AGGCCTGCGAAACTCGGCGCGGTGGGCCTG 2312104 36 100.0 29 .................................... CGCGGGTGTCGATGATGGCAATGTCGTCT 2312169 36 100.0 30 .................................... ACAGCCCATGTAGAGGGCGCGGGCCGCGGG 2312235 36 97.2 30 T................................... GCAGCACGGCATGGTCGGAGACCTCGAAGG 2312301 36 100.0 30 .................................... CCGATCTGGTGGCCGTGTAAGGGGCGGAAT 2312367 36 100.0 30 .................................... GTTCAGGACTGCCGTTTTCGGCTTCCTTCC 2312433 36 100.0 30 .................................... ATGGTCGATGACAAGCCGATGAGTGGGCTG 2312499 36 100.0 30 .................................... GACCGGCTGCGGGCCCCACTTTGCCTCGAT 2312565 36 100.0 30 .................................... AGCGACCAGCAAGCTCTCCGATGCGATGGA 2312631 36 100.0 30 .................................... CGCGCTGATAGGGCTCAAGCACTGGAAGAA 2312697 36 100.0 30 .................................... TCCATGCGGTCCAGGGTCTCGACCGGCACG 2312763 36 100.0 30 .................................... CGGCGCCGGTCGGTGGGCGCAGGACGAAGA 2312829 36 100.0 30 .................................... CAGCGCCCGCCACCACCGCAGATATTCCGC 2312895 36 100.0 30 .................................... CAGCCCCCTCAAGCACCGTCATCCCGTCTT 2312961 36 100.0 30 .................................... GTGCGGAGCGGGTTTTCGGCATGACCGCAA 2313027 36 100.0 29 .................................... TCGGACCGCTTCATAGGCATCCCCTACCG 2313092 36 100.0 30 .................................... CCCATGCTCAGGGAAATAGCTGCGCATGTC 2313158 36 100.0 30 .................................... GGCCTGCGCCTCAAGGATCAGTTCGTTGAA 2313224 36 100.0 30 .................................... GACCACCTGCTGGATGGAGCGAAGCGGTGA 2313290 36 100.0 30 .................................... GGGCAGGGGCAGCGGGACGGGCGGTGGGGA 2313356 36 100.0 30 .................................... CTCGCGCATGGCGACGATGGTGTCGTGCAT 2313422 36 100.0 30 .................................... GTGGACGATATCGTGGCCTGGGCCGCTGAT 2313488 36 100.0 29 .................................... CGTTGGCCACCATTTCCCCGATGCCCTTC 2313553 36 100.0 29 .................................... CTCACGCTCGAAGCGTTCTCGCTCGAGCC 2313618 36 100.0 30 .................................... TCCGCGCGACGATGACGGTTGGCTATGGCG 2313684 36 97.2 30 ......................C............. GTGGTGGATGATGATGGCATGAAGGAAGCC 2313750 36 100.0 30 .................................... GATATGATCGTGAAAGCGGGCATGCTCCTC 2313816 36 100.0 30 .................................... CCTCGACGCCGAGATGGTGGAACTGCTGCG 2313882 36 100.0 30 .................................... TACAAGGCAGCCGTTTCGGATGACCGCACG 2313948 36 100.0 30 .................................... CTCTCGGAAGCTCAGGGCGGGCCTGGAAAT 2314014 36 100.0 30 .................................... GGGGTCGGACATGTCCGGCAGGCCGCTGGC 2314080 36 100.0 30 .................................... CCGGCGTTGCAACACGAACCGTATGTCGGC 2314146 36 100.0 30 .................................... CACCCCCCGCACCCGCATCGGCCTTGGCCA 2314212 36 100.0 30 .................................... TGAATGTCAGCCAGATGAAGGCGGACTTTT 2314278 36 100.0 30 .................................... GGGGTCGGACATGTCCGGCAGGCCGCTGGC 2314344 36 100.0 30 .................................... CCGGCGTTGCAACACGAACCGTATGTCGGC 2314410 36 100.0 30 .................................... TCCCCCACATAAACCACGGCCAAAAGGTAC 2314476 36 100.0 29 .................................... CTTGTAAAGTTGATCAAGTTGCTGGATGT 2314541 36 100.0 30 .................................... CACGCGGTCGAGCTGGAGTGTATCGGCAGC 2314607 36 100.0 30 .................................... CCACCGTTGACGCGAACGCGCCCCTCGACA 2314673 36 100.0 30 .................................... AAGCTGCTGGCGACAGGGATGGACCGGCCA 2314739 36 100.0 30 .................................... TGCACCTCGGACGGGGTCATTGGCCGCACC 2314805 36 100.0 30 .................................... CTGGGGGTGGTGGTTCTTGTGCGTAAGGGG 2314871 36 100.0 30 .................................... CCTTGCCTCACGACACTGTCGCGCGGCGTT 2314937 36 100.0 30 .................................... AAATGACCAACACGCATCACAAGCCTGACA 2315003 36 100.0 30 .................................... CGCCCTGCCGTCCAGAAGGCGACCTGCGGC 2315069 36 100.0 30 .................................... AGAAGTGGATCGCGCGCCTGTTGCTGGCGC 2315135 36 100.0 30 .................................... CGATGCCGACAAGGGTTGGCCGGTCACGGA 2315201 36 100.0 30 .................................... GGGTGCAGGCAGCGATGGCCGCCTTTGCGG 2315267 36 100.0 30 .................................... CCGGTCACCGTCAGTGTTGGCGTGCTGATC 2315333 36 100.0 30 .................................... GGGCGGCGCGCTGACCCATGCGGGGTGGGC 2315399 36 100.0 30 .................................... GATCGTCGGCCTCGGCCGCGTCCACCGGGA 2315465 36 100.0 31 .................................... TCAGGTCACCAAACGGGTTGCCTTCGGCCAC 2315532 36 100.0 30 .................................... GCAGGCCTCGGGGAAGTCGTTCGCCAGACG 2315598 36 100.0 30 .................................... GATCTGCTGGACGCCACACTGAAGGGCTTC 2315664 36 100.0 29 .................................... CGAGGGCGGGTCGAAGCTCATCCGCCTGA 2315729 36 100.0 30 .................................... GTTCTTCACCTTCGTCACCGGTACGAAAAA 2315795 36 100.0 30 .................................... GCCAGAGCGCGGCAAAAGGCACCGACCTCT 2315861 36 100.0 30 .................................... GCCGCGGCCGTCGATTTCATCCTGTCCGGA 2315927 36 100.0 30 .................................... GCCATGATGGGGGTGCAGGCCCCCCGCTAA 2315993 36 100.0 29 .................................... CAAGGGGCGCGCGCGACGCGTTCGGGCCA 2316058 36 100.0 29 .................................... CAAGGGGCGCGCGCGACGCGTTCGGGCCA 2316123 36 100.0 29 .................................... GCACAGCGCGAGATCTATGACGATGCGCG 2316188 36 100.0 30 .................................... GTAGGAGGGCGCGCGCCTGGGCCGGAAGGT 2316254 36 100.0 30 .................................... CTGATTGTGCCGTGAACAGATCGTGGATCA 2316320 36 100.0 29 .................................... TCCGTCCCCCTCGCTCTCTGCCCCGTTGC 2316385 36 100.0 30 .................................... CGATCAGGCGTGGCACCTGGGCCAGTTGCT 2316451 36 100.0 30 .................................... CGTCCGAGATATCGTCCGCCGCGACCGCGA 2316517 36 100.0 30 .................................... TTAGGCAGCCCACCGAAATCGTTGTCCATG 2316583 36 100.0 30 .................................... CCCGGGCGCCGTGCGTCACGACGTGGTCGA 2316649 36 100.0 30 .................................... GTCGTCCGCAATGCCTTCCTGTCCGTGATC 2316715 36 100.0 30 .................................... ATGCCCATTTCAGCGAACCCGATCATTTCG 2316781 36 100.0 29 .................................... TTCACGCGCTGTTGCTGCGCGTCGCGAGC 2316846 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 84 36 99.9 30 GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT # Left flank : GCACCCGCTTGCGCAGCCGCTCCGTCGCGATCAGCGATTTTTTTATATGTGAACCCAAGGCGATGGATCAGATGGCGCGATAGCATCGCCGGAGTGGCGGTGAGGTCGTGTTCCAGCTTCAACGCCTCGGCCAGCTCAGGCATAGAGATGTCCGGCTCGGCTTCAACGCGCGATTTGAGCCAGTCCGAGACCCTGTCGAGCTTGCTACCGCGCGGGCGCCCCTGGGGCGCGGCCTTCACCCCTCCCGTTCGCCTCTTGCGTTGCATGATCCGCACAGCGCTTGCTGCTGATATCCGCAAACGCCGCCCAGCTTCATGGCAAGAAAGGCCGTCATCAACCAGAGCCACAACACGCTCACGAATGTCCAGTGATAGCGATTTGCCCATGATCCACCTCAACATATGGTGAATCACAAAATCCGTCCCCTGAGAACCCCGCCGATTCAGATTTCAAGGCCGACGCTCTAAACTTTCCGGTCGCGCCCACGGACCGGCGGTGAC # Right flank : TTGTTCCTCTTCCAAGCTCCTGAAATCAAAGGAACTTTGGGAGGGGACGGGTAAGGCAAACCGAAGAGTCTTCATCAAAACAGCGCCAGTTGTTCTGGATTCTTCCGGGCCGCCCTGCGGCCCTGATCGGAGAAGTGAACGATATCACGATATTGCCGGTCGGTGAAGTTGAGGATCTGGATGTCGCCCTTGTCGGGCAGATGTCGCTCAATTCGGTTCACGCGCGTCTGGAACGCCTCTTTGCCGTTGACGAAGCGTGCGTAGACCGAGAACTGGCTGCGCTCGAACCCTTCATCCAGCAGGAAGTTCCGGAAGTCCGTCGCCGCCTTCCGCTGCGGCTTGGTGTCGGTGGGCAAATCAAACATCACGAGAATCCACATGATTCGGTATCCAGACAGGTAGACAGGTGCAGTGGTCATGACCCCAACCCCGCAAGGGTAAGAGCATCGGGCGGCGAAGGCAGGGCAAGGTTCAGGCGTCCGGTCTCAAAGCTCTGGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //