Array 1 454-805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCN01000131.1 Bacteroides fragilis str. 2-F-2 #5 gbf2F25.contig.131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 454 47 93.6 29 ...A......A.............................G...... GGATCAATGTATGAAGGAGTCCCGTAGAA 530 47 100.0 29 ............................................... AACTCTTGTGGGAATGGTGCGTCAATTGA 606 47 100.0 30 ............................................... CTACCGGGTTGAGGTTGACGCCTCTAAGGT 683 47 100.0 29 ............................................... ATGATATATATCCGACTAATAGCAATTAT 759 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 98.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTTAAAAACAAAAGGCTTGATTTAACAGAAAGTTAAATCAAGTTATAGGAAGAGGAAAAACAAAAGGGGGAAAAGGATTGAAAATGAAGAGAATAGAGAAAAAAGGAGTATCTGCCAAAAAAAGGATAAGTGTCGGACCGAAAGGGATAGTTGCGATTAGGACAAGCATGGGGGCAGGGGATTTTAAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGCG # Right flank : TTTCAATTCCGCTTTAACAGCCTTATTATGTTGTGATTTGCTTTC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 454-884 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGCN01000132.1 Bacteroides fragilis str. 2-F-2 #5 gbf2F25.contig.132, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 454 47 93.6 29 ...A......A.............................G...... GGATCAATGTATGAAGGAGTCCCGTAGAA 530 47 100.0 30 ............................................... TCATGAAACGATAGATTATAATGCTCTTAT 607 47 100.0 30 ............................................... GGTGCCCAGTGGGAGAACCCTACATACTAT 684 47 100.0 30 ............................................... ATGATCGCAGAATTGATGTATCTGGCGACT 761 47 100.0 30 ............................................... AATTACTTTCATTCAGTTGATCTAACTGAT 838 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 98.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTTAAAAACAAAAGGCTTGATTTAACAGAAAGTTAAATCAAGTTATAGGAAGAGGAAAAACAAAAGGGGGAAAAGGATTGAAAATGAAGAGAATAGAGAAAAAAGGAGTATCTGCCAAAAAAAGGATAAGTGTCGGACCGAAAGGGATAGTTGCGATTAGGACAAGCATGGGGGCAGGGGATTTTAAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGCG # Right flank : CAGATTTCACATAACATATTGTTCTTCAATAAGTTAAGAGTAAATTAGAAAAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGGCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //