Array 1 327115-330253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNVZ01000015.1 Bifidobacterium longum subsp. longum 17-1B seq15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 327115 36 100.0 35 .................................... ACGTTCAGTCGGCCTTGATATCCGGCCTGTGTCGC 327186 36 100.0 35 .................................... CGACATGACCGCCACAAGCACGAGCACGGCCAACA 327257 36 100.0 37 .................................... GTTTAACTGCACGGCGACAAACGCCCCCAGAGTGGAA 327330 36 100.0 36 .................................... GACAACGACATAGACACCCTATACGACTTGACCAAA 327402 36 100.0 37 .................................... TCGAGCAGGTAGGGGCTGAGCTTGTCTCGGTGGTCTC 327475 36 100.0 37 .................................... CTATGGGGCGCTACTGGTGTCGGAAAAACCCGACATG 327548 36 100.0 36 .................................... CGGACATACAGGGGTTCAGGCGTCACCCAAGCCGCG 327620 36 100.0 35 .................................... ATTCAGGGCGTTGCCGCATTCGTCCGCGAAGTCGA 327691 36 100.0 37 .................................... GGAGTCCCGACCGTATGGTTGCAATTGGACTGAGATG 327764 36 100.0 36 .................................... TCCTCCATTCGGTCCATCTCGTCTTGCAGCAGTCTT 327836 36 100.0 38 .................................... GTTGATGATCTTCTGGTTCGCTCCGTCGCGCCCGCCAA 327910 36 100.0 36 .................................... ATGCTGGAAGGTAACGGCGTAGGGCATGGCAGAATC 327982 36 100.0 36 .................................... TGGGTGCCCTTGCGCCAACACTGTCTTTCGCGCAGC 328054 36 100.0 36 .................................... GACTACAGCAACGCAGAGACCGCCGAACTGAACACC 328126 36 100.0 35 .................................... GTTGGGAAAACCCACACGTTCGTCCCCGTTGGATA 328197 36 100.0 34 .................................... GCACAAAAAGCTGCCCCCTGCTCAGTGGCGGGAT 328267 36 100.0 37 .................................... CCGGACGTACTGGTGTTCTTCAATGAGACGGCGAGCG 328340 36 100.0 36 .................................... AAGCCCCACGGACGTGCCCCGCCATACTCAGGAGAA 328412 36 100.0 40 .................................... CCGCTCCGGCGGCCAGAGTGTTCGTGGCCCATGAATGGCG 328488 36 100.0 37 .................................... TCTGTCGAGTCGCATTCCGCCGATGACGCTGCGGACG 328561 36 100.0 38 .................................... GCCACAACATAGGGACAACCATAATGCGCGCGTTCGGG 328635 36 100.0 36 .................................... TCGGGAGAACCGTCATACACGGCCCAACTCGGCATA 328707 36 100.0 35 .................................... TCGACCTTGGTCTGGGAATTGGGCACTTCGACGTA 328778 36 100.0 35 .................................... TCGTCGGCGGTGGTCCAGATGCCCATCAGCGAGAA 328849 36 100.0 35 .................................... GAACGCGACTATCCCGCGACTCATTCCGAGGCCGG 328920 36 100.0 36 .................................... AACATTGGGCACCGACCCGGGTGTTCTGGTTACGGA 328992 36 100.0 36 .................................... ATAATAGTAGGGCCATACACCTTATTAGTGCATGAC 329064 36 100.0 37 .................................... CCGTTACAGGGCGTATGGGGTGGCGTGAACAGGAGTA 329137 36 100.0 37 .................................... AAGCCACATCAGCCGAGAACAATGCGTATCCTTCTTC 329210 36 100.0 38 .................................... CCGCCAGCAGCGTGCACTGTTACGAGGCTTCTACGGTC 329284 36 97.2 37 ................T................... GCGTTCCAACGGTCCATGCTGCCGTTGCCGTGCGGCG 329357 36 100.0 35 .................................... ATGTTGTCGAATCCACGTTTCTTTCTCTTGCGGTT 329428 36 100.0 37 .................................... GTTACCGGAATTGTCAAGGCGATACTTGGGCAACGCA 329501 36 100.0 36 .................................... AACCAGTTCATCGACATCCTCGTAAATCGTATCGGC 329573 36 100.0 35 .................................... TACGGTCACCAGTACCAAGTCACAGGGTATGAGTG 329644 36 100.0 37 .................................... GTGGCTAGCGCTAACGGTAAGTGTGTTGTCGCGTATC 329717 36 100.0 35 .................................... TCATCGACCACGTAGTCAAGTCAAAGGACAACCGG 329788 36 100.0 36 .................................... TAAGCGACCAGGACGCGAGGACCGCTAGCGAACGGT 329860 36 100.0 36 .................................... GGCGTGCGTCTGCACATGATTGTCGTCCCGCCCGGC 329932 36 100.0 35 .................................... CGCAACATCGGTCATACTTGGTTCTGTGTCCATCA 330003 36 100.0 37 .................................... CTCAATATCTGGACTCAGATATACGGCGCGCTGGGTA 330076 36 100.0 35 .................................... GACATGCCGTTGTATCGCATCCCGTTGGACGGTAT 330147 36 100.0 35 .................................... TTGGTGGGGGCTAGCTCGTCGTGGCATATGCTGAC 330218 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ======================================== ================== 44 36 99.9 36 CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Left flank : GAAAATCCATACGGCTTATTTAAGGAATGTGATTTATTTTTTCGCGATATGCGATAGATGTTTGATAACTAAATAGTGGTACTAAGATAAGGGGGGTGCGGATGTTTTTTTTGACGGTCAGGCGGCCAGTCCAAGGTGTTTGCGGTATTGCACGGGGCTTATCCAGTCCAGTGACTTCTTGATCCTAGTCTCATTGTAGTGGGTCAGGTAGGTGTATTGCTTCAATGTTTGTTGGGCGGGTTCGGCAGTGTTTTTCCGCCCCTTACGCTTACGAAATCAACGGCTCGACGACGAACTGACATCCACGAAAACAGCAATAGCGCCTATTGTTTTTGCGAGATCTGAATCGCTCCTGAATGAGCTACTAGGCATTCGCAATGAGAATATAGCGGTTCTGTGGATCTGAGAATCGAGATTGCTATGTTAGAGGACGTAGCCGTCCTCCACCTCTCGCAGTTTTGTCGGGAAAACCTCCAGTGATACTATAAATTCGAGCCTGC # Right flank : GAGTGTGAGGCATGAAAGAAAACTCTTACACTCTGGCCTTGCATATGATGTGACCTGGTTTTTTGTTCCGCATCTCCTATCAAGTGAGAGGAAATGCGGAACAAAAACCAGGTCACATCAATATCGATACACTTCCGTGTGAAGCTCGTCATAGTGGATTGCACGAAAAACAAATAGGGTGCTTTCCGCCATCAACAGCGGAAAGCACCCTATTCTTATGATCTCTCTGTCCTAATTAGAGCACCTCACTCCGCAGCAATCGCGGCCTTGAGCTCCTCGACCTTGTCGGTCTTCTCCCACGGGAACTCAACGTCTGTGCGGCCGAAGTGGCCGTACGCGGCGGTCTTCAAGTAGATCGGGCGCTTCAGGTCGAGCTCGTCGATGATGGCGGCGGGGCGCAGGTCGAAGACCTTGCGTACGGCGGCGGCGATCTGGCCGCGCGTCACGCCTTGCTCGGTGCCGAAGGTCTCCACGTTGACGGATACCGGTTCGGCAACGCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //