Array 1 2071382-2070032 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP039747.1 Staphylococcus pseudintermedius strain ME4692 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   2071381	    36	 100.0	    30	....................................	ACTAAATGCGTCTTGCTACTCACACCACTA 	
   2071315	    36	 100.0	    29	....................................	ATATTTGTTATGATGAAACACAAGAGTCA  	
   2071250	    36	 100.0	    30	....................................	AATAAAAATAATTATATATCTCAAGAACAA 	
   2071184	    36	 100.0	    29	....................................	GTGAATGCTTCGTAAGTTGCATTACCTTG  	
   2071119	    36	  97.2	    30	............................A.......	ATGCTGTACGATAGAAACATTTTAGGTTTG 	
   2071053	    36	  97.2	    29	............................A.......	ACGATGGTCGTATCATTGATTCCAGCGTG  	
   2070988	    36	  97.2	    30	............................A.......	GAACGTCCGTACATTGTTGCAGCCGCATCA 	
   2070922	    36	  97.2	    29	............................A.......	AGAAATGGTTGAAGAACAACTAGCAGTAG  	
   2070857	    36	 100.0	    30	....................................	AGAGAAGAAATTGTGGCAATACGGTATTGT 	
   2070791	    36	 100.0	    31	....................................	CGTCGATTTCGACATAATCAATCGCCTTATG	
   2070724	    36	 100.0	    30	....................................	TGTACGTTCAAACACAACCGCAACATCTGG 	
   2070658	    36	 100.0	    29	....................................	AATATAAAAGGCGCTAAGAGGCGTTATAT  	
   2070593	    36	 100.0	    29	....................................	TACAACGCTTTTGTATGGAGCAATACGGT  	
   2070528	    36	 100.0	    30	....................................	AGAAGTAAATAGCAAACTGAACGATACTAT 	
   2070462	    36	 100.0	    29	....................................	GAATTTTGCAGTCCTAGTAAGCGATAGCG  	
   2070397	    36	  97.2	    29	............................A.......	GGACAACAACAAGATATTGCTCAAGCCTA  	
   2070332	    36	  97.2	    30	............................A.......	TTTCCTTCGTGATTTCTTCTTCTACTTCGA 	
   2070266	    36	  97.2	    30	............................A.......	AATGCACGTGCTGTTATGGTGAAAGGCTAT 	
   2070200	    36	  94.4	    30	...........T................A.......	CGAAAGTAAAGATAGTATGCAAGGTGCAAG 	
   2070134	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT 	
   2070068	    35	  83.3	     0	T........T................-.CA.C....	|                              	CT [2070035]
==========	======	======	======	====================================	===============================	==================
        21	    36	  97.9	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                               	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTTGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATGC

# Questionable array : NO	 Score: 6.01
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [11-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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