Array 1 1133-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOMN01000012.1 Lactobacillus bombicola strain R-53102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1132 29 96.6 32 ............................C CGTAGTGCCCGTGGTGCTAATGAGTCCAACGA 1071 29 100.0 32 ............................. TGAACACCATCAAAATCATAGATGATATCTAG 1010 29 100.0 32 ............................. TACTGGAGCAAGGCTGAGTTAATGTTGACTCA 949 29 100.0 32 ............................. AAAAAGATTGGAGGACAAAGGTAAAGAAATGA 888 29 96.6 32 ............................C AAAGTATCGAACAAATTAAAACTAATAATCCT 827 29 96.6 32 ............................C TACCTGTGGAGTCAAGCCGATGGCTGGAATTT 766 29 100.0 32 ............................. ATATGATTATTTTTTTAAGATTGGCATGCCTA 705 29 100.0 33 ............................. AAAACCACTGCTTTAGATAAAGCTTTAAAAGAA 643 29 100.0 32 ............................. CAGCCTAGTTTACAGGAGTTAAATTTGGGGGG 582 29 100.0 32 ............................. CGTGATGTTGCTCTACCTGAGCAAGCAGTTGA 521 28 93.1 32 .................-..........C TTCGTAAGTGCTGCCTTTGTATCTAAGTATTT 461 29 100.0 32 ............................. TATCAATGCTGGTTTGGCAAAATCAATTGCTG 400 29 100.0 32 ............................. ATTTTACGTGGTCAAGGTACTGCTGATGATGT 339 29 100.0 32 ............................. GGTTGAACAAGATATTCCAAAGAAAGGAATAA 278 29 100.0 32 ............................. ATTTTACGTGGTCAAGGTACTGCTGATGATGT 217 29 100.0 32 ............................. GGTTGAACAAGATATTCCAAAGAAAGGAATAA 156 29 100.0 32 ............................. ATTTTACGTGGTCAAGGTACTGCTGATGATGT 95 29 100.0 32 ............................. GGTTGAACAAGATATTCCAAAGAAAGGAATAA 34 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.1 32 GTGTTCCCCACGTATGTGGGGGTGATCCT # Left flank : GATAAAAATCAAATTATTTCTATTGGAGCAGTTAAAAAAATTAATGATAAAAAGTATGATAGTTTTTATAGATTAATTAAAGTTGATACTGCGGTGCCAAAGACGATAACTGAATTAACCGACATAACATTAGAATTATTGAAAAAAGAGGGGGTTACTTTAGATAGAGCTCTTAGAGAACTAACTGAGTTTATTAGTTCTGCCACGATTATTGGCTATAATTTACAGTTTGATTTATCCTTTCTCATGTCCGGCTATAGATCTGTAAATTTAAAAGAACCGGATAATGAAACTTTAGATTTATTATCTGTAGTTAAAAAAGCAGAAAAATTTATTGATAATTATCGTTTGGCAACTATTTTAGATTTTTATAATATTAAGAATTCCAAGCCACATAATGCACTATCTGATGCTAAGGCTACGTTGCAGTTGTTATATAAACTAATGGAAAATGGCAATATCAAAGTTTAAAAATAAGGGTATAATAAGGATCTTTTACT # Right flank : TATTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //