Array 1 104650-104003 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSCK01000010.1 Photorhabdus sp. S9-53 S9_53_scf0010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 104649 29 65.5 32 .......TCACCTC.GT...........C GAATTTTGGTATACATTTGCACAGGGAAAAAT 104588 29 79.3 32 A....T.....GT...AT........... CTATAATTAGTGGTAGGATATCGTGTTAGTGA 104527 29 75.9 33 .......TG..CA....C...G......A AACTCGATAAATCTCGTCAAAGAGAGAATTTAA 104465 29 93.1 32 ............T..G............. CGGCATGAGTGATGCTTTACTATGTTCACTAA 104404 29 86.2 33 A......................GG...T AGCAGTGCTCCAAATAGTTATATAGCTAAGGAT 104342 29 93.1 32 .A............C.............. TACGAAAATGACACTGATCATTGGCTTCCTTG TGTTA [104327] 104276 29 79.3 93 .........A.CTC.CT............ GACAGTAACAGTGATAGAGTCGGTAGTAATTGGTGTTCCTTGTGTCCACGGGGGTGAACCGAACTGATACTGTTGTGTTTTGGATTTGGAAGC 104154 29 100.0 32 ............................. AACAGTTAGCGTTTGAGCTGGCAGAGATGGAC 104093 29 79.3 32 T.......C..TTC.......G....... CTAAATACAGAACTATCTCCATCTGTTGCAAT 104032 29 82.8 0 T..A........TC.........C..... | A [104020] ========== ====== ====== ====== ============================= ============================================================================================= ================== 10 29 83.4 39 GTGTTCCCTGTACTTACGGGGATAAACCG # Left flank : CAGGGGAAAATAAAAGTTATGATGGAGAATGCTGCCCGTAATTGGCTGTTAAATCATCGTCGTATGCAGCAGTGGGGTATTCAGTTTGACGATTTACTGGATATTGAAGGTTATACTCAGCATCGAAGTGTAAAAAAGCAGGGGCAAAAAATACAATTTTCCAGTGTTGATTTTCAAGGGCTTCTGACGATTACCAACGGTGAGCTATATTTGGAACAGTATGCAAAAGGCTTTGGTCGTGCTAAAGCGATGGGATGTGGATTGATGTTAATCAGAACAGTATAATGGCATTGATGTCATTTAAATTTATTTTTGTTGAAGATCGTAATGCAATATTCTTTGTTGTATGAGGATATTGATGTTAAAGGTAGCAAATTCGCTGTTGTTAGGCGTTCGTGTTATGTTTCAAAAGCATGGTAAAAAGTGATATTGCTAACTAATATCATCCTGTAGAGTAAGGCGTGGTCGTTACTCTCGGAAATATTGATAAAATAATTACC # Right flank : TCATCCGGAAAGATAATTGACGTAAAAGGTCAGAGTTCCTTGAATTGATGGGGATAAACCAGATTCAGGTTTCATGATGATAGTTGAAGTAGAAATGTTCCCCGTTTTTACGGGGACAGCCCTTTGGGCTTTCAGATTGTTGACAAAGTGCTGGTTTTTTATCCGGCACTTTGTTTTAATTAAGTTCCGTTCATTCAACGGAGCTTGCCGCCATGCTAAGAACACCCCCTCTCCAGACTTTCCCGCCAGAAACGCTCTCGCTTGACGAACTGGTTCCTAAAAATCATTTGGTCCGTCAAATCGATGCCGCCATTGATTTCGAATTTATCCGCGAATGAGTCGCCCCATTGTATTGCCACAATAATGGCCGTCCTGCTATCGATCCGGTCATGCTGATTAAAATGATGTTACTCGGCTACTTGTTTGGCGTCCCCAGTGAACGCCGTCTGGTACAGGAAATTCAGGTTAATGTGGCTTACCGCTGGTTTCTGCGCCTCGGA # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.20, 5:-1.5, 6:0.25, 7:-0.74, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTACTTACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //