Array 1 24351-24744 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWWU010000012.1 Klebsiella pneumoniae strain ZKP177 isolate ZKP177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 24351 28 100.0 33 ............................ CCTTCGCGCACACCATCAGATTCACTTCTGAGG 24412 28 100.0 33 ............................ TAAAGAGCCCTTCATTATCCCACCGCTGGTCGG 24473 28 100.0 33 ............................ CGAGCTCATTCAGTCGCTGGAGTCGGCGGGCGA 24534 28 100.0 33 ............................ TTCCATCATCTGCGGCGGGATAGCGCTGCGGGT 24595 28 89.3 33 ............C.........G.G... CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG 24656 28 96.4 33 ..............T............. TTCATCACGTGTGAGCGGATTTGACTCTATCCT 24717 28 92.9 0 ...................A.......T | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.9 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCAGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTTGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGATATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33498-34745 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWWU010000012.1 Klebsiella pneumoniae strain ZKP177 isolate ZKP177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33498 28 100.0 33 ............................ TTTTTATTCAAGCGGGGCATAGAGGTGTTCAGG 33559 28 100.0 33 ............................ TGTACAGCAAAAGAGCAAGGACGTGGTCATGGC 33620 28 100.0 33 ............................ TGGAGATCTGGCAGTAAAGGGAGTTTCTGATGA 33681 28 96.4 33 ...........................T AACCTGAAAAGGTCAAATTTATAAAGGATGAGA 33742 28 100.0 33 ............................ CCCAAAAGCCATAAATTCTCCTATTGTTTCCAG 33803 28 100.0 33 ............................ CAGCGCTCCGCCGCAAAATCACGCGTTGAGGCG 33864 28 100.0 33 ............................ CTGGACGAGTCATTGAGCGGGAGATACGGCGGA 33925 28 100.0 33 ............................ CGGAAAAGGCCATCAAGGTCATGATCCAGGAAA 33986 28 100.0 33 ............................ TAAACTGCCGCTTATCGCGTTTGCGTGGGCTGA 34047 28 100.0 33 ............................ TTATCTACCCAGGAACTTCTTGCTTGGCAGTTT 34108 28 100.0 33 ............................ TAAAGCGTTGTGGTGATAGCCATCAGCTAATTT 34169 28 100.0 33 ............................ CCAGTATTCGCGGCTGGCTGGTGGCAAATGTTG 34230 28 100.0 33 ............................ TCGACTGGCGCTCACGGAAAACGGCAAGGTCAA 34291 28 100.0 33 ............................ TGCCCTCGAGTCGGAAAAAGCTATCGACCGCGC 34352 28 100.0 33 ............................ TTAGCTCAAGTAACCCTTCTTCAATCATGCTTG 34413 28 100.0 33 ............................ TCGCGTCATGGTCCATGCTGTGGATTTTTGCCA 34474 28 100.0 33 ............................ TTAATAATGGATGCTGGCGGCCTGGCGGGCTTC 34535 28 100.0 33 ............................ TCAGCAGGCAGGACGCGCCCCACACCAGCGGCG 34596 28 100.0 33 ............................ CTGACGAACCAGCGAGGCGGCGGTGCAGAAATA 34657 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 34718 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.8 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATATTAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGTAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGCTACAAATTGGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //