Array 1 108035-107133 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHMV010000005.1 Streptococcus pyogenes strain 14GA0826, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
    108034	    32	 100.0	    34	................................	TTTTTGGCTTCGTTGTGTAACAAATCCAGTGCGC   	
    107968	    32	 100.0	    36	................................	ATCGAATTAACAATTATTGCTTGATAGTAAAGTATG 	
    107900	    32	 100.0	    36	................................	ATAACCAAGTTTTGTATAAATATCACAATCAGTCTT 	
    107832	    32	 100.0	    35	................................	AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC  	
    107765	    32	 100.0	    34	................................	TATATAGTCAGCCACATACTGCGGTACTTCTGGT   	
    107699	    32	 100.0	    34	................................	TAAATCACTAGTAATTGTATATTGTAATTTCACG   	
    107633	    32	 100.0	    36	................................	TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 	
    107565	    32	 100.0	    37	................................	ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG	
    107496	    32	  96.9	    35	..............A.................	ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA  	
    107429	    32	 100.0	    34	................................	GGAAGGAAATAGTTGTAAAAATGCCAAAAAAACT   	
    107363	    32	 100.0	    34	................................	TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA   	
    107297	    32	 100.0	    35	................................	GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT  	
    107230	    32	 100.0	    34	................................	ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA   	
    107164	    32	  96.9	     0	...............................G	|                                    	
==========	======	======	======	================================	=====================================	==================
        14	    32	  99.6	    35	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                     	       

# Left flank :   AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//