Array 1 786019-785570 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 786018 28 100.0 32 ............................ TCAACTTCTTGGCTCCACTGATCCGCCCACTC 785958 28 100.0 32 ............................ ACCGCCAAGACTTTGCCGCGTGGTCGATGAAA 785898 28 100.0 32 ............................ CATTTGTACTGTCCGGCCAAGCCAATGGCATC 785838 28 100.0 32 ............................ TAACCTCAGACAATTCAAAAATAACAACATCC 785778 28 100.0 32 ............................ AACTGAAGCCAAAACCTGCGGCCCACGAAAAA 785718 28 100.0 33 ............................ ATGCGGGGCATTGTTGATTTTGGTTTGCCATAC 785657 28 100.0 32 ............................ TTTTTGGCATCAAGCCTTTCGCCAATAATAAA 785597 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : CGCGGCGCTGCTCTACGAAGAATCCCCGGAAAGCCACGCCCAACGCCAACTGCAAATCATCCAACAGCGCGAACAACGGGAATTTTTAGCCATCAACGGCATAGACCACAAGCCCAATAAAAAAGAACGCCGCTTGATCCATCGGTTTAAAGATGGGCAATAACGCCCATCACCTTACCGCGTTTCCGGTACAGAAAAGCTCCCCTCGCGATCAATATGAGCGGCATCAAACGGAGCGCAAAGGTCTTTAGCCTTTGGACGATAACCTAAAGCCAACGCATTAACATTCCGCTTACCCCCTGTAGCTTACCCATAACCATAACAGACCAGCCCCTATTTTTACCCCCTAAGCCTGCACCCCCAAAATTTAGGAATAAATTTAAAGCCCAAATTTACTTAATAATAATCAATAACTTATAGTAGCATCAAAAAACATTGGTTTTTCTTGCCAAAATCCTCGTAAAGCCTATATACTCTAGCCTCTGAAGCATCTAACTCCA # Right flank : ATCAATCTTAGCACCCGACTGGATTTGTTTCAGAAACGTTTGTAGGCAAGCATTTTTATGCTGAAATAGTCACGCTGTACCAAAAATTACACGAGGCTGACTTATGATCCATAGATACCAAGACAATTGCCGTTTTTGCGCCCATTATCTGGGCGGACAGCGCTGTAAGGCATTCCCTTTGTCGATACCTGCTTACTTATGGTCGGGCGACAACCAGCACCGTAGCCCCTATGATGGCGACCAAGGCATCCAGTATGCGTCTAAGCAGATGGCCGTGCCCGATGCAGATGCCTTTCTGTCCGGCAATTATTAATGGCTGGCGCATCCGTCACTGTTAACCGTCGGCCAGCATTTACAGCAGCTTAAAAACCCAAATGCCATTATCTACCCCTCACAAACAAGTTGGCGGCTTGGGCAACCCCGCCAGCTTGCAAGTATACTTCAACGGCCCATCGGGGAATAAGCGCTGCAAATAACGGCTATTGCCCTTCTCTTCCCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2205222-2205047 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 2205221 36 100.0 32 .................................... GAACTGCCCATCTTAAACACAAAGTCTGTTCC 2205153 36 100.0 35 .................................... CAGGCTCATCACTTCCTATTTACCAAGTTTTTTTT 2205082 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 3 36 100.0 34 GTTTGATAGGCATCCCTGTACCGAAGGGATTAAGAC # Left flank : ACAACTATCAAGCCCCGCCGTTTTCAGCGCTTGCCGCCCACGCCGAAACGATACGCAGCCAAACGGCATTCCATTGGTGCCATTGGCAACGCTATTCCAATAGGCAACAACAAAAGATGCGCTTTGATGGCGTGTTAGGGCAGATAAGCTTAAGCGGCGACTTGCGGCCTTTCTTGCCCATGCTGCAAGCCGGGCAGTGGCTACACATTGGCAACAAAACCACGTTTGGCATGGGGCGTTATCAAATCAGCTGACAGATTTATCACTATCAACAATAGCCCCGTTGGTGTGAGGCACATCGGACCGTTTTACCATCGTGTTGGGTTGAAACCGGCCCCAGTGGCGTTTTTAGGAAAAAATGACCCCATGCAACCCGTTAATTTTTTTGTTAGAATGGCCTTACCGTATGGTTTTTTTGAGTTAACTGAAAAAGCCAAAAACGGTCTCCTAAAAGTGCCCAATAACATATTGATATATTTATTAAATATGGTGCTAATGGG # Right flank : GGTTTAAGATATAGATGTTGTCCAGGTTCTGTCGCAAATATTTACAAGAGCCGAGCCTGGCCTGATTGGCGGGCAAAACTAGCCCGCCAAATTGATAAATTGCTGGTAAGCGGGAAGTGTCTTCCCGGCGAGTTGCCCTTTGCGGATCATATGGGCGGTTTCGATCCCATCGAGGGTGGCTTGGGCGGAACGGAAAGCTTTGAACCCCAACATTGGCCCGGTTATCTTTTTGATGAACCGGTGATCCTGTTCCACCCGGTTATTGAGGTATTTGACTTGGCAAATGTCGACCATCAGGCAAAGCAGGCCTGCCAGCACCAGCAAGACGTTGATGTTTTCCAATCCGGCCAGGTTGGCGCCGCTTTTGTCCATGACCACTTTTTCGGGCAGGCCATTGCCATCAATGGCTTGCCTGAAGAAGGCGGTGGCCGCCGCTTCGTCACGGCGTTCGGACAGCATAAAGTCTATGATACTCCCCATATTTTAGACCAGCAGTTAAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATAGGCATCCCTGTACCGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 2219001-2219949 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 2219001 36 100.0 35 .................................... GTAGGATCAAGACCACTGTCGGCATTGCGGATAGC 2219072 36 100.0 35 .................................... GCGGCTGGTTTCTAATGTTGGGAATAATGCTGTTA 2219143 36 100.0 34 .................................... AGCGGTAACATGCCCGGTTGAACTTGTACCACCC 2219213 36 100.0 33 .................................... GGTTAATGACCGCCCGTTTGTTGAGCAAGAAGC 2219282 36 100.0 34 .................................... CCGCAATCAGCCTGACTTCCGTCTTTCAAGAAAC 2219352 36 100.0 33 .................................... GTGGAGAATCTTAGCCGTTGCCAGATAATATCT 2219421 36 100.0 33 .................................... GTGGAGAATCTTAGCCGTTGCCAGATAATATCT 2219490 36 100.0 36 .................................... CATTCTTTTGTTGCTCTCTTTCCACTTCAACAAGAG 2219562 36 100.0 33 .................................... CATTGGGTCTTCATACAACGAGATAGCAAATTT 2219631 36 100.0 34 .................................... AGATACTTTTTGCACCATTGTTGATGGTGCAAAA 2219701 36 100.0 35 .................................... ACCGTTACCAAGATCATTAACACTAATGTCAGACG 2219772 36 97.2 35 ...........................A........ GAGGGCTAAAGTGACCAGTTCGGGGCGGCGGTGGT 2219843 36 100.0 35 .................................... CCTCATAACCATGGACGTTGCGTGGACTTGGCAGT 2219914 36 91.7 0 .................................CGG | ========== ====== ====== ====== ==================================== ==================================== ================== 14 36 99.2 34 GTTTGATAGGTATCCCTGTTCAGAAGGGATTAAGAC # Left flank : AGAGACTGAAGCCGTTTGTTGCCGACAATAAGGCCATGAAATTAATGGCGCTTTGGTTAAAGCAAGGCGCCCACCAAAAAAGTTTGTTGGGTAAGGTGCGGGGTATCCCACAGGGAAGCGTGTTGTCGCCGTTATTGTGCAATTTATATCTGCACGATTTTGACCAGTCATTAAGTCGTGCCAATATCCCTTTTGTACGGTTCGCCGATGATTTTTTACTGTTCACCGACAGCAAAATGAACGCTTTGGCGGCAAAAGCGTATGCAAAAAACCAACTTGGCAAACTGGATTTGAATTTACATCCTGTTAAATCACGGATTGTCCAAAGTGGCCCCCATGTGATATTTTTAGGCCAAAAATTGCCCTATGCAACGCGTTAGTTTTTTGGTTAGAATAGCCTTGCCCTATGGGTTTCAAGAGTTAACTGAAAAGGTTAAAATCGGTCTCTTAAAAGTGACTTGTAACATATTGATATATAATAAAAATATTGTATGCGAGGG # Right flank : GGCGGGCGATCTACATGTGGAAATGACTGATTATCCGTGCAGTTTTATAGGCTTGCGAAAAACCTGTCCCTTCAAAAATATAACCTTTGCTTTAAATGGTGTTAAGTAATGGGATTTGGTTTAAACTGGTCGATAATTAATTATTCAACAAGGGTCAGATAGGATGCAAATCAGGTTTGGATTCGGTTTAGACGGCATTAAACCCAAACGGACACACACCGCTATCGGCGAAAAGGAGGTCGGCCCGATAGGCTTCCTGTCCGTTCTGGAGACACAATGCGGTATCGCCCCGGTAACAGACTCACTAGCCACGCGTATTATCCAGTATCTAGGTTGTCTGAAAGCTTGTGACACCCCCGACCGTTTTTATCATCTCTCTTTGGCAACCGATCAGTTCAATGTGGCCAAAACGTTGCTGCAATGGCGTGATGGCTGGTATGAATCCGGTTGGGACGGCCTATTTTCAAGCGGGGTATCCGGCCGTTTGGCGGATATGGCGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATAGGTATCCCTGTTCAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 4 2229804-2230190 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2229804 37 100.0 30 ..................................... AAACATTTTTGCTGTATGGAAGTTGACAAC 2229871 37 100.0 33 ..................................... ATCTTCTTGTGGATGTTCTGCTGCCCACTGTTG 2229941 37 97.3 34 ....................................C CTGTAGCAGTCTCTTTTATTTCTTCTCTCGTCAG 2230012 37 100.0 32 ..................................... TCATCAACCGAGTCAAGCCGGCAATGTGGCTA 2230081 37 100.0 36 ..................................... TCGACTTCGTAAGGGCGAATGCTATTTACACTTACG 2230154 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 99.5 33 GTTTGATAGGTATCCCTGTTCGGAAGGGATTAAGACA # Left flank : GGCCGACAGCTTTATTTCGGCTGTTGGGCATACGGCAACCGCACAATTTCTCAGCCAGCTTTTAGGGATAAGCATTTCTGCCAACCGTGTGCAAATTACCTTGGCGCCAGGGGATCGGGCGTTGGTGTTGTGCCTAAAAACCCGCTTGCAAGAAGGGCGTGTACTCAATGCGGAAGAAATGGCGGTTATTCCCTATGAAATTGGTTTGATTACGCGACGTCAATAAAAGCCCTTTTATTATAAGAGCCGATTATCGGGAGACCGCTTCCCTAACAGCAACACCCAAAAGCCAATGAAGCTAGCCATTGCAAGAGCCGATGGGCTCAAAAGCCTGTTTGAGCGCTTTTTTAAACGTAGGATTGTTTTATGCAGCACACTAATTTTTCGGTTAGAATAGCCAAGCCTGATAGTTTTTTAGGGTTAACTGAAAAAGCCAAAAACGGTCTCTTAAAAACAGCATATAACCTACTGATATATAAATTAAATATTTATCGTCAGGG # Right flank : AATGTGATCTGCGTATATAGCCAATACGATATAAATTGATGATGCCAAAAAGGGGACAAGAAGGACTGTACGTCCTTGAAGGACGGGCAGTCCCTTATCGGCTTATATTGGATTTGTAATGGTCAACAAAAACCGGACACTTTCTTAGGCAACCTTGCTGTAAAATTCCCGCTCAAATTCCAAAGGGGTTTTATAGCCCAATGTCGAATGCGAACGTCTGCCGTTATAAAAAGCGAAATAATCAATAATGCTTAGTTTTGCGGCTTCTTTTGTCTTGAACCTTTCGTAGTTCAATTGCTCGTGCTTTAGGCTTGGGGGCGGGATAGGGTGCTTGAATGATGGCAACAATTTTGTTGTGCAACAAAATTGTTGCTATGGTGTAGGATCTTCGATCAGAAGGTTAATGTCATGTCACCACAAGACCCTATGCACATCACTATGATGCATCAGTTAGCGATGCCTGCCGAACATCACCCGAATGAGTCTATTTGAATGAATCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATAGGTATCCCTGTTCGGAAGGGATTAAGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 5 4208025-4207817 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4208024 28 100.0 32 ............................ ATCGCACGGTTTTGGTTTTGCGCTTGTTGGGC 4207964 28 100.0 32 ............................ GATACCTTGGTTTATCAAGTCAAAAGACTGAG 4207904 28 100.0 32 ............................ TTCTTGGATAATGGGTGGTGTTTTGTTGGCTT 4207844 28 92.9 0 A.......................A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAACCGGAAAAGCCCGCCACACCGCACTGCCGTACAACGCGGAAATCACAACACCTCCAATCCCAACAACACCAGCAACCAACCGGAAGTCCTATTTAAGTTCAATCTACCATAACTTAGCATAACTGTGAACGGCCAAGTTTTCGGCTTTTACAATTCACCGTAGGGTACGCTGTCACTGCCATTAAGTTAAGGAAATTCTGTTCAGAAACAATGTTTTTTCTTCCTTTTATGGAAGTTCAGCAACCCCCTTGCCGATGTCTTTTGTCTGGGCGGGTTACGGTGCTTTCGTTCCAAGCAAGGGCCGATGTAAACGCACAGCTTGCTGTTGAGGTGCTGGAAATCTTCTTTTGACAACCCGACAAGGCGTTTGTATTCTTCGGGGTTGTCGGTGGGTAGCTGGGCATACGGTTTCATGGCTTTTTGGTGGTTTAGGGTAAAACTTGATATTTTAACCTGTCAACGTTTATATAGTCAGCAATATTTAGGAAAGATGTCTA # Right flank : ATAAAATGAATATCCCACGGCGGCGAATATGACGAACTTTTTCATGGTCACGTCGTGGGGTTTGGGGGCTTTGCCAAACTAGCCCTATAAATTCTCCAGCGTTTGCGGATCTAATCCTGTCAGTTCGATAATTTCGTCTAACGTGTAGCCTTTGGCTTTCATCTTAGTCGCCAGCGTCACTTTTTCTGCTATTTTCCCTTGTGTTAATCCCTTAGCCAAGCCCTGAGCTAGGCCTTCTGCCAATCCCACAGCTAAGCCCTGCGATTTACCGTCTTCCCGCGCGGTAGCAAACGAATTATTCAAATCCCGGTAATACTTTAGGCTGTCTTCATATTGTATGAGCTGTTCATGGTTAAATTTGGCAATTTCGGCGACTTCAAATAGGCGTTTGAATATTTTCTCCGTCAGTTTGGCAGGGATTTTTTCCAGTTCGGGTAAATGCTTAAGCACATACAGCCATTTTTCAAAACGGCTGTCTATTTCAGCCAATGCTTTGTTGA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 6 4456825-4458473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4456825 28 100.0 32 ............................ GTTGCGCAAACGTGCGCGTAAAGTTTGGCCTA 4456885 28 100.0 32 ............................ GTCAACGATAGGCTTAGAGTCTATGCGGATTT 4456945 28 100.0 32 ............................ AAGGCCAATATACCGAGGATGACGGTGTTACG 4457005 28 100.0 32 ............................ ATGCGGCATCTTGCCCACCCGACAGACGCATC 4457065 28 100.0 32 ............................ AATTGTTATCTTGTCACCATCGGCAAAGCCCT 4457125 28 100.0 32 ............................ ATAATAAAAGTCCGGTCTTCTGACATTAGTTT 4457185 28 100.0 33 ............................ TAAGGTGAGCGCATTTTCGTTAAAACTGCCCGC 4457246 28 100.0 32 ............................ TGTCAAGGGGCAGAAAGCCGCGCGTATCCGCG 4457306 28 100.0 32 ............................ AAGGCCAATATACCGAGGATGACGGTGTTACG 4457366 28 100.0 32 ............................ ATGCGGCATCTTGCCCACCCGACAGACGCATC 4457426 28 100.0 32 ............................ AATTGTTATCTTGTCACCATCGGCAAAGCCCT 4457486 28 100.0 32 ............................ ATAATAAAAGTCCGGTCTTCTGACATTAGTTT 4457546 28 100.0 32 ............................ TGTTGGTTAGACTCGGCAAAACTGCCTTGGGT 4457606 28 100.0 32 ............................ GTTTTAGCAACTAGATTGCTAGCCATTGCCAC 4457666 28 100.0 32 ............................ CTGCTTATCTTTCCAAAGCTTGCCCATATTTC 4457726 28 100.0 32 ............................ TCAAGATGCTTGGGGATACTTGGTTACAGCTC 4457786 28 100.0 32 ............................ ACACAGATAAGGCGATTACCATGAGCATATCC 4457846 28 100.0 32 ............................ TTTAATAGCATACAAGGCTTTAAATGGACTGA 4457906 28 100.0 32 ............................ ATTGTCGGACAATTCAAATCAGCCCCGCTGTT 4457966 28 100.0 32 ............................ TTGAAAAAACAACAGGCCAGCGACCGGAAAAT 4458026 28 100.0 32 ............................ TTTAATAATCAGCACGGCTATCTGTCGGCGAT 4458086 28 100.0 32 ............................ AATTAGCCAGCCGCCACCACCAGGGCTTATCA 4458146 28 100.0 32 ............................ TCAATTAAGAGCCGCCAGACCCAGTCATTTTT 4458206 28 100.0 32 ............................ TCAACGGCAGATTGCTCAAGCTGAGCCGCTTG 4458266 28 100.0 32 ............................ ATAAGGCGTATTGGCATCATCACGGCACGGTC 4458326 28 100.0 32 ............................ TCCTCCATTTTTCGGTCGCTGGCCTGTTGTTT 4458386 28 100.0 32 ............................ AACCGCATCCTTAACCGCTCGCGCCAGGAATA 4458446 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 100.0 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCGGTGCTTTAGTTAGTTGGATTTTTAATACTCGATCATCAAGTTTTTAATATTAGAATAAGCAACTTAGCCATTAGATATTGGATTAGTATTTTAATTAAGTAAAAACAACAAGTTGCAATGTAACCCATCCCCCTCCCCTGATGGGGAGGGATGGGGTGGGGAGAATCTAAATAAGGCTTTTTTCATTAAACGAAATAAAAACAGTCTGATTAAAATCTCTTAGCCATGAGCATAAGCCATTGATTTTATTCTCCCCACCCCAACCCTCACTGCCATTAAGTTAAGGGTTTTTGTGGCTATATGGACGATAATAAACGAATTTTTTAGATTATTAACATGGTTAAAAAAAGCGGGCAGTTGAGCGTGGCCGCATCTTGCTTAAATTCCAGGGTAAATTTGGGTTTTTTGACTTTATCTGTTTTGCTCATTTTTCACCTCTGCTGACATTATAATATGCCTTTGGAAGTGTCCGGCTTTATTAGACCATTTCAGAGTTT # Right flank : ATTATAGGGGTCAAAACGGTTGAATGTCAGCAAACCGCACAATCCGCCCAAGCCATTTCCGTCGGGCATAAAAAAACCGCAATCAAGCGGTTGATTTGTATCGAAAGTTTGGAGGCTGCGGCCGGAATCGAACCGGCGTAGATGGCTTTGCAGGCCACTGCATAACCATTTTGCTACGCAGCCGTATCTCGAAATAAAAAAGCCGCGAGGTTCGCGGCTTTTTCTTGAATCTATTGGAGCGGGAAACGAGATTCGAACTCGCGACCCCAACCTTGGCAAGGTTGTGCTCTACCACTGAGCTATTCCCGCACTGCAATTTATTTTGCATATTATAAGGATTTTTTAACGTCCGTCAATACTTTTTTTAAAAAATCGTTTATGTCAGCGTTTTTTTTATTGGACATCAATCGATAAAGCCCAACCTTCGTTGCCTTTGCATTCACCTTCTTCCATGCGCACTTTCGCGTAGGAGCCTTTTTTGCCATAAGCATCTTGCAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 7 4535881-4536508 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4535881 28 100.0 32 ............................ GCCTTCTACATTGTCGCTAGTTGTTTCTAAGC 4535941 28 100.0 32 ............................ GTTAACCCGCATTGCCGCTTCGGTCATTTGTG 4536001 28 100.0 32 ............................ AGTTTGATGAGCATCATGTTGAATGCGTCGGC 4536061 28 100.0 32 ............................ ATTCTTGGAACATTGCTAGTCAGCCAGCCCTC 4536121 28 100.0 32 ............................ GATGAAAATTTAACTATTGAGGGCTAGAAAAT 4536181 28 100.0 32 ............................ AAACAGACCAAGCAGGGCGGGGATCGGCTTAG 4536241 28 100.0 32 ............................ TCAACCATCGCGCTCTGCTCAATCCGCTTAAA 4536301 28 100.0 32 ............................ TAATTGTATTGATGTCGATACATTTGCCGTTG 4536361 28 100.0 32 ............................ TGACGGCCATCCGGTGACTCAAAGCGCAGGAT 4536421 28 100.0 32 ............................ GACACCTTGGTTAAGCTTGTGCGATACCATGC 4536481 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATAGGACGGCCACAGCGCAGCCCCATCCGTGCTAGCACTGTAAAATTCGGTGTGCATATTTCTTAACATGGGCGCGAAGCAGCCGCCATTGCGGCCAGCCAACAATAGAGGCCGTCACGCACCGGACGACCCAAAGCGGAGTGCAATGGCCTTTAGCCATTGCACGATGACCTAACCGAGTGTGCCAACAGATCGCCTGCCGATTGCTTAACACCGGACGCTATAACACGAAAATACCCACCCCTCCCCCAAGCCGCTCCCCTAGCCTTACAAACTCAGAACCCCAGCCCATATCCAAACGCGAACAGACAGCCTTGCAAAAGTTGGGCGGATAAGTAGCAGGGCATAATACCGACGCTGGTTTTTTACCCCTTATTTTTAGGGCAAATAAAAAGACATTGAAAAACAATTGGTTGCGAATTTGTGTTTTTTTATTGGTAAAAAATGAAAATATCGTTTAAGCTGTTGTTGCGTTTGATGATTTTTTGTTTTTATTTCA # Right flank : ATCTCTAATGTGTGGACTTGTAATGGTCAACAAAAACCGGACACTTTCTTAGGCAACCTTGCTGTAAAATTCCCGCTCAAATTCCAAAGGGGTTTTATAGCCCAATGTCGAATGCGAACGTCTGCCGTTATAAAAAGCGAAATATTGAGCCTTTGGAGTTGAGCCGCCACCCCTAAGGTGGCCATTATTGACAGGCCGCGTTAGCGACCTGTTTTACCGCTTTGAGCGGTTCACACCATAAAGCCCCCAGCTTTGCTGGGGGATATTTACTGGTATAGGCAAAGCGCCCATCATTTGAGCTAATCCGCCCATCCTGACTAAAGCTAATTTTACCCCTAGGATCAGTCACCTCTGGATTGACCATTTGCGGCAACTCGGCTGCATCATAGCCAGCCGAACTGCAATGGATGGCTTGTACAGCTGCATGGGTATTGGCAAAATTGGCTAACGCGCCGTTTATAGCAAAATGAGTCCCTTTAAACTCATTACAGGTCGGACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 8 4567116-4567983 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022129.1 Methylovulum psychrotolerans strain HV10_M2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4567116 28 100.0 32 ............................ TGTCGCCGTGCTCGAATAGCACTTAAAAATTC 4567176 28 100.0 32 ............................ TGAATATAGCGCGATATAACAACAATCCGCCC 4567236 28 100.0 32 ............................ ATTAGGCTATCCCCCATCGTGCGTGACCGTTG 4567296 28 100.0 32 ............................ TATATCTATCATATAGGTGTCACTAGGTTTGG 4567356 28 100.0 32 ............................ ATAACTACGCCTTGGGTGCCGTCCGTGCTTCC 4567416 28 100.0 32 ............................ TACACCCCCCCCTGTAGCCGCGCGTTTCTCGC 4567476 28 100.0 32 ............................ ACGGCAATGTACTGCCGAGGCCGACAGGTGTA 4567536 28 100.0 32 ............................ AGACGGCTTAATCCAATTGCCCCGCTGCTCTA 4567596 28 100.0 32 ............................ TTCAAAGGGGCAATAGAAAACAAAACCAGATT 4567656 28 100.0 32 ............................ AAGGCCTTAATCATGGCAATCCGAACTTATGA 4567716 28 100.0 32 ............................ ATAAGGGCGTTGCTCAGTACAAGCAAGCAGCG 4567776 28 100.0 32 ............................ GCTTTCAGATTTTGGACGCAAGTCCACAACTG 4567836 28 100.0 32 ............................ ACGTCGAATTATTGGGCAAATGGCAGCGGTGA 4567896 28 100.0 32 ............................ GTGCCGCTGATATTAGCTAAAGCCTTTGCCAA 4567956 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTTACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCACAAGCATTCGCCCTGTGCCGGAAAAACTCAGCGGGTTCGCCACTTATCAACGCGAACATCCCAAAACCAACAAAGAGCGTTTAGCCAGGCGTTATGCTAAAAGGCATAATATGGCCTTCGAAACGGCGTTGCATAGCACTATTGATTTAACCGCCAAGGCTCCCCCTGACGCGGATTACAAAACGCAATTCCGTTATTGCGATATGCCGCAAAAAACCGTCGCTACCCCGTTTATCCGCTTGACAAGCCTGAGCGGCGGGCAGACGTTTTGCCTGTGGATTAAAAAAACGGTAGTTGCAGAGCCGTCGGGGGCGGCATTCAGCAGTTATGGCCTAAGTGCCGTTTCCACTGTACCCGAATTTTGACCCATATTTTTTGCGCTCTTTAAAAATATAGTAAAATCAGTTGGTTGTGTGGCGGTGTTTTTTGGATGGTGAATAACGGTAAAATCTCCTGTATACTGCTACACAACTGGCTTTCAGAGGTTTTGAGTTCA # Right flank : AGAGAAATGTTATGGGGAGGCTATGCTCGGATAGTAGACATCTTTCCTAAATGTTGCCATATCTCAGGTTAACCAGTGCGGCCACCAGGCTCCATGTCAGGGAGTAGTTTTTGTGTTTGCCCCGGTAAACGTCCTTGACGATCCTGAAAATCTTGCAGCGGGAGGGGGACGGGTTCCATTGCAACTTGTTGTTTTAAATTAATTTGTTCAAATTTTTAATATCCGGTAGTTGAACTATTTATCCGAATGTTAAAAACTTGATAATCGAGTTAAAGGTGTGAAAACTTGAAAAGCTTGGCGGGCCATGACCGAAACGGTTTCGTAGCCATTTTCTAGGAACTTGCATGAGATAGCCTTGCAAATTTGGAGCGCGGGCATCTTGCCCGCCCTTGCGGGCAAGATGCCCGCGCTCCAAACCCCATGCCTTAGCAGATAGCAGGGCGTTAAGGGCAGGGAGGTGGGTTTGCTTAATTTCCCGTGCAACTTTAATGGCTTTTGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //