Array 1 45729-46630 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHLH010000005.1 Streptococcus pyogenes strain 14GA0838, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
     45729	    32	 100.0	    34	................................	TTTTTGGCTTCGTTGTGTAACAAATCCAGTGCGC   	
     45795	    32	 100.0	    36	................................	ATCGAATTAACAATTATTGCTTGATAGTAAAGTATG 	
     45863	    32	 100.0	    36	................................	ATAACCAAGTTTTGTATAAATATCACAATCAGTCTT 	
     45931	    32	 100.0	    35	................................	AGATTCGGCTAGATATTCCAAAAAATCGATAAAGC  	
     45998	    32	 100.0	    34	................................	TATATAGTCAGCCACATACTGCGGTACTTCTGGT   	
     46064	    32	 100.0	    34	................................	TAAATCACTAGTAATTGTATATTGTAATTTCACG   	
     46130	    32	 100.0	    36	................................	TGCGTTTGTTGTTGGATCCTGCGAAAAAGATATCCC 	
     46198	    32	 100.0	    37	................................	ACCAACTTGCTTTCCAATTTATCAATTTGGAGATAAG	
     46267	    32	  96.9	    35	..............A.................	ATGTTATTTCTCCTCGATCTCGTCCAAAAGTCTTA  	
     46334	    32	 100.0	    34	................................	GGAAGGAAATAGTTGTAAAAATGCCAAAAAAACT   	
     46400	    32	 100.0	    34	................................	TTTGGTTTAAGCTTAAGATTCACTACTCAATAGA   	
     46466	    32	 100.0	    35	................................	GAATAACTCTCCATCTTCATCAAGTGACGGTTCGT  	
     46533	    32	 100.0	    34	................................	ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA   	
     46599	    32	  96.9	     0	...............................G	|                                    	
==========	======	======	======	================================	=====================================	==================
        14	    32	  99.6	    35	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                     	       

# Left flank :   AAGGCGATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  GATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGATAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : NA
//