Array 1 33020-31599 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFPJ010000001.1 Lactobacillus sp. M0392 NODE_1_length_277172_cov_308.101672, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33019 36 100.0 30 .................................... AAGGCAGGATTATGTTGTTTAGCATATTGA 32953 36 100.0 30 .................................... TCAATGCTGTGGCAATAACTATCAGGCTAA 32887 36 100.0 30 .................................... TTTCGGGTACAATTTCCGTTTCAAAGCCAA 32821 36 100.0 30 .................................... TAAACCTGTTAAGTTTGCAGCAGGTTCAAA 32755 36 100.0 30 .................................... TAGATCAGGCACTTGGTGAGCAAAAGGAAG 32689 36 100.0 30 .................................... AATGTAGCCGACTACTTATCAATGCTCAGT 32623 36 100.0 30 .................................... ATTTTATAGAAAGATTAAAGGTGTTTCATA 32557 36 100.0 30 .................................... TAGTGACTTTTAAAATGCCATTAGTTGTTA 32491 36 100.0 30 .................................... GCCTTTTTCACGTTGGCCAATCTTTCGCAC 32425 36 100.0 30 .................................... TGGTTTACTTGATAAACCAAATAACTATTT 32359 36 100.0 30 .................................... TAGATAAGACGAAAACAAAACAAAATGTTA 32293 36 100.0 30 .................................... CTTTTTCTGTGGTTTTAATGCGTGTCATTA 32227 36 100.0 30 .................................... TAATATTCATTTAAATAATCTCCCTTTTAA 32161 36 100.0 30 .................................... AAGCTGCAACTGAGTCATACATAAAGCTCC 32095 36 100.0 30 .................................... TTTTTGATCCATTAGCCAATGCAATGTTTC 32029 36 100.0 30 .................................... CAGCAATGCTGACTTTATGCCATTGCGTGT 31963 36 100.0 30 .................................... TGTGACAATGCCTTGCCTGTCTGATCATTA 31897 36 100.0 30 .................................... ATAACTACCGTCATAATCACTATCACTATC 31831 36 100.0 30 .................................... AAGGGGACTCTCAGTACCAACCTATACCAA 31765 36 100.0 30 .................................... GTGCCAGATGATATTGACCAACGAGAAGGC 31699 36 100.0 30 .................................... TAAAGTTTGCTGAATTGAGTTTGCCCAATT 31633 35 94.4 0 ................................-..G | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : TTAGTGGTGATATTACCAAAAAGTATATGCCTCATATTGTAAATAGTTACCTAAAAAATTTAGATGAAGAAAATCGTAATAAGGTGATTAAGTCTTTTTATAATTTAGAGTCAACCTTGCAGGATTCACTTTTACTTGAAGATTTACCCTTAGCAATTAATTTTGATGAGGATTTAAAAAAGTTGCTTAAATTTGCAGAAATTCATTTTGAAGAATCAATGTTGCTCAGTACATATGGTACAATAGAAACAGTTTTAAAAATTCACCAGACGTGTAATTTAAAATCTGTTCCTGTTATTTGTAATGTAGCTCATTACTTGGAAGAACAGGAGTGGCAAGAGCTAGCTAGTCTTGTTACAGAAATGAATTTAATTTTGATTGTAATTGAATTCACGACGAAAGAAAATTTGGCAATATCTAAAGACATACCTTTTTATTATATTGATAAAGATCTAATCGATTGGTACTAACAAAAATTAAAATCAGATTATAAAATATCG # Right flank : GCATGCTTAGAAATCAAGGCAAGATTAACAATTATCTAGTTGACTATTACTGCAAATTAAAAGAGCCACCATATTCCAAAAAAAGGATTTGGTAGCTCAAATAGCCTACGTTAACCATTTAAATCGTACAATCATGCATTTGGCTCACACAAATCAAAGCTATGATTATCAACAAGCTGTAGGTCAATAAAGATTAATTGTTAAACAAATATTTAACTTGCAAAAAGGCGCTTTTTTGAAGTATCTTTAGTATACCCATTTTTAAATCTTTTTGATACTTGAAATTCTATAAGAAATCATATTGATAATGCAAAGATAAGTAGTAACAGATAATAAATCTGCTAATTAATCACACATGATAATAGCGACAAAGTAGTCAGGCATATTTTATTTCCTTATATGTGACTTCCACTATGCAGATATAAACTAAACTCCCATTAAAAAGGTAAGCTTATTCATATGAAAAACATACTAAAAAGTAGAAACAACAGACTATATCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //