Array 1 163645-160747 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZGV010000028.1 Shewanella algae strain A94 A94_28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163644 29 96.6 32 ............................T AATACTTCCTGAACCTGCATCACATTGATGCC 163583 29 100.0 32 ............................. ACCACAATGAGCAGCAGCGTAAGAACATTGCC 163522 29 100.0 32 ............................. GATGCCATCCCCTAATCGGTTGTATTGAACGT 163461 29 100.0 32 ............................. GCTCACGTTATTGGAACGTTCCTTGTCACCGC 163400 29 100.0 32 ............................. GGCGCTTATATCAGCCTATAGTCGTTTGGGAA 163339 29 100.0 32 ............................. GTAGACAAGACATGGGCAACATGGCCTGAGAT 163278 29 100.0 32 ............................. AGTATCGATAATTACTCCAGCTACCATCGGAG 163217 29 100.0 32 ............................. GCCTAAACATGAGCATTGGAGAAAATATTAGA 163156 29 100.0 32 ............................. CCAATCACATGCTTGCGCTTGGGGTCGAAAAG 163095 29 100.0 32 ............................. AACCCTTCATGCTGTCGAGCGTTTCCATCATT 163034 29 100.0 32 ............................. GCACAATCCGCAATGTCTTTGCTAACTACGTC 162973 29 100.0 32 ............................. TCTCAGACAGCAATTATCGGAACAATCTATGG 162912 29 96.6 32 ............................A CGGAAATCCATATCTCGGCTCAGTGAACCTGT 162851 29 100.0 32 ............................. ACCCCTGGGTCAAACGCTTATTTTAATATCGC 162790 29 100.0 32 ............................. TTGGCACGGACACCGCCAAAGAGTGGATATAC 162729 29 100.0 32 ............................. GTTTTCTCCGGCGACACTGTTGAGCTTGGAGA 162668 29 100.0 32 ............................. ACACCCGAAAAAAGCATGAGGTGTCTACGTAT 162607 29 100.0 33 ............................. CTATCCGCTTCGCGACTTATGCGGCTTCAAAAC 162545 29 100.0 32 ............................. CTGACTGGGCTCTGGTTGTCCTGCCAAGGTTC 162484 29 100.0 32 ............................. AGCTAAAAGTGTTTCACGTTGTTTATCATACT 162423 29 100.0 32 ............................. TCAGTAGATGAAATGTACCTGCCGATAAAAGA 162362 29 100.0 32 ............................. CTGCCAAGTAACTTTGTTGGTGAAACAGAGAT 162301 29 100.0 32 ............................. AGTCATCACAGAAAAAACAGCACCGACAACAA 162240 29 100.0 32 ............................. CGCTTGAGCCTGACTTTGTTCCCTATGAGCTC 162179 29 100.0 32 ............................. GAGGCCGCATGAGCCAACGTATCGAATGTAGC 162118 29 100.0 32 ............................. TCCGGCAAACAATACACCGCCGCCATGCTTGG 162057 29 100.0 32 ............................. GCTCTGGCTCTGTTGGTGGCGGCGGTACTGAC 161996 29 100.0 32 ............................. CGCCTATTTAGATACATATCGTGATACTGGCC 161935 29 100.0 32 ............................. GCCAAGATACCAAAGAATAGCAGTCTGTATCT 161874 29 100.0 32 ............................. GAGCCACCATAAACCACATCGACAGCAATACC 161813 29 100.0 32 ............................. CCAGCTTGGTTACTCTCTTACCAATGTATAAT 161752 29 100.0 32 ............................. GGTAAATCTGCTGTCTCGTGATCGTCCCTCAT 161691 29 100.0 32 ............................. TTAGCACCCGGTATTTTATACTCCCGCAAGGG 161630 29 100.0 32 ............................. ACGATTAAAGACATCTCCAACATCGAAGCAAC 161569 29 100.0 32 ............................. GATATATGCTGAAAGGCACTTCAACTCTGTAT 161508 29 100.0 32 ............................. CCTCAACAAAAACCAGCGCACGCTCAATCAGC 161447 29 100.0 32 ............................. CCGCCAAATCACTCGAGCGCCTTTCTGGTCAG 161386 29 100.0 32 ............................. TTTATTATTGGGTTGGATGGATATCACCCCAC 161325 29 100.0 32 ............................. ACTATCCCCCGCAATATGTCGAAACTGACCAT 161264 29 100.0 32 ............................. CGGATAAATCCAGGCCGTATCAGCAACCCCAA 161203 29 100.0 32 ............................. GGGTAATTGCCCCTCTTTTCAGCCTTGCTGAG 161142 29 96.6 32 ..............C.............. GCATGACTAGAAGTGTTAAAAGGACAGCCTGG 161081 29 96.6 33 ..............C.............. GTGAAACAGGGCAGTTACTATTTAGTACTTTAC 161019 29 96.6 32 ..............C.............. CCAGTTGGGCCGAGCGGGGTCCCGTTGGTTAG 160958 29 96.6 32 ..............C.............. ATATTGAGGCGGCATTTACAGAATATGCTGAG 160897 29 96.6 32 ..............C.............. CCGATACGGCCACGGATGAACACCACGCGATC 160836 29 96.6 32 ..............C.............. GCATCATCCTTGCCGTCGGCCAGGCGTGGGCT 160775 29 89.7 0 ..............C...........GT. | ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.2 32 GAGTTCCCCGCACCTACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCCTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAGTCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATTGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : TATTTCTTTACTGTACAACCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGACTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCTGGCGGCATCCTGCGGGGTAAACCTGCCTGTTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCTACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //