Array 1 503884-499288 **** Predicted by CRISPRDetect 2.4 *** >NC_008782.1 Acidovorax sp. JS42, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================================== ================== 503883 28 100.0 32 ............................ TGGGTCCCCCCCGCAAGCGGGGGCCCCCCCAG 503823 28 100.0 32 ............................ AACCGGCAAATACAGCCGCTTCTGCCACATGT 503763 28 100.0 33 ............................ TTGGCAGCGCGAGCTGGCACTCATCAATGACGA 503702 28 100.0 32 ............................ ACTACAACGCCGATGTGCTTCTGCTCACTCAG 503642 28 100.0 32 ............................ AATGGGGACTTGGAATACTTGGTTCACTTCAA 503582 28 100.0 32 ............................ TGCCGACCCGGTCGAATACCTCAAGGCAACGT 503522 28 100.0 32 ............................ TTGGCTCTCTCCCACGCGGCTGCGAAGGCTTG 503462 28 100.0 32 ............................ ACTGGCGCGCCAGGTGCGGGGATTGTGCTTTT 503402 28 100.0 32 ............................ TCAAGAAGCAAGGCCGCGAGAGGCTGACCGAG 503342 28 100.0 33 ............................ TGATGCCCAGGCGCTCTGCCTTCTCTTCCACAT 503281 28 100.0 32 ............................ TGTCGCTGGTGTTCTACCCGCCCAGCCGCCGG 503221 28 100.0 32 ............................ GTCGGCCCAGTTTCAGTTGAACCTGGCGCAAT 503161 28 100.0 32 ............................ ACCACCTTGATGCGAAACAGGTAGCGCGCATC 503101 28 100.0 32 ............................ AGTCGGATCGGTTGATCAACAATCCCCTGAAA 503041 28 100.0 32 ............................ AACCCATCCCGCAGGAGTGAGAACCATGAGCA 502981 28 100.0 32 ............................ GGCTTGGCGGTCAGGTAATCCAGCTTGTCGTC 502921 28 100.0 32 ............................ TTCAACCCCGAGGTGATGGACATTGACGAGAT 502861 28 100.0 32 ............................ TTCCGCTACCTGGGGCAGGCAGTGGACCTGAT 502801 28 100.0 32 ............................ AGGGTCCATGCCAAGGATTAGGCTCATGCGAA 502741 28 100.0 32 ............................ ATGAGTCCACGCTGCCGAAGTGCGGATTCGCC 502681 28 100.0 32 ............................ TGCAGGAACTCGCCAGACGGCTCCCAATCGGC 502621 28 100.0 32 ............................ TGGACTGACGTGCAGCAATCTCGGTGCACACC 502561 28 100.0 32 ............................ TCGTGCGCCAGGAAGACATGGCCATGACCGAG 502501 28 100.0 32 ............................ AAGAAGCGCCTGGCGGATGCCCAGCGCGCGAG 502441 28 100.0 32 ............................ TCGTCTGCGTTGGGCACCTTGATGAGCTTCAC 502381 28 100.0 32 ............................ TCGATTGCCTACAAGGTAGCCAAGAGCAAAAC 502321 28 100.0 32 ............................ AGCGGAATCAAACAAGAGACGCGCGACAAAGA 502261 28 100.0 32 ............................ GTAGTGCGTCTGCTGTCATGCGAACCCCCTCA 502201 28 100.0 32 ............................ ACCCCAGCGCCACGCCAGCAGCAGCGGCAGGC 502141 28 100.0 32 ............................ GACACCGAAGAGCGAGCCGCCTGAATGCAGTC 502081 28 100.0 32 ............................ TCCAAGTCCTGGCTGAACATGTCCGACGCAGC 502021 28 100.0 32 ............................ TTGATGGCGTGCCAAAAGTCCTCGCCGCAGGC 501961 28 100.0 32 ............................ GCACTGAACATGACGATTGAGAGGCTGTACGG 501901 28 100.0 32 ............................ ACTACCGACAAGTGGAAGGACAAGCAGACAGG 501841 28 100.0 32 ............................ ACTGCGCATTCACCATCACATCAGGGCATGCG 501781 28 100.0 32 ............................ AGCGCCAGCAGCGCAGGGAGATGCGCTGGATA 501721 28 100.0 32 ............................ ACGGTAAGAGCTTGATGCTTTCCCAGGTGCTG 501661 28 100.0 32 ............................ GCCAGAATTCAGCGCGGCTCACGGACTGTCGC 501601 28 100.0 32 ............................ ATGCATGCGTCCACAGCAGCCATTTGCGTGTC 501541 28 100.0 32 ............................ AGCGGGTACGGCGCGCAGATCGGCTCCAGCGG 501481 28 100.0 32 ............................ GAGCGGTGGTGCGTGCCCATCACCTGGGTGGA 501421 28 100.0 32 ............................ ACTGCGCATTCACCATCACATCAGGGCATGCG 501361 28 100.0 32 ............................ CGCTGATGGCGACGTTTAACGCTGTGACGCTG 501301 28 100.0 32 ............................ GTCATCCCCGTTGTCTTTCTCAGTGGTTACTT 501241 28 100.0 32 ............................ ATCAGATGTTCTAGGGGAACACCATGACAGCT 501181 28 100.0 32 ............................ CACACGCCCGGCGATCCGGGCCGATGTAGGGA 501121 28 100.0 32 ............................ TGCTCTGCTTTCTTGCACGCTTCCAGTGCCTC 501061 28 100.0 33 ............................ TCGGCCGCGTCCTGCTGGTACAGGGCATTCCAG 501000 28 100.0 32 ............................ AGAGCTACCAGGCCAAGCTGCAGCAGCGCGAG 500940 28 100.0 32 ............................ TGCTCCTTGGCGAACTCCTGCGCCTGCTGGAA 500880 28 100.0 32 ............................ TTGTAGCGCGTGACACCCGTGCGCCGCTCGCG 500820 28 100.0 32 ............................ TGTTTGCGAAAGCAGACTGGAATGCCCTGTAC 500760 28 100.0 32 ............................ TGCTCCTTGGCGAACTCCTGCGCCTGCTGGAA 500700 28 100.0 33 ............................ TCTGCGCCAGACTTGAGCAGCGTTGGCTTGTCT 500639 28 100.0 32 ............................ ATCATCGTGATGGCTATCGGGATTCGGCTGGT 500579 28 100.0 32 ............................ GCCGTGGCCGCACGCTCGGCCACAGTAGGCCG 500519 28 100.0 32 ............................ GTTGATGGCCGCGCCGTTGATGAGGCCGTATC 500459 28 100.0 33 ............................ GTCACCTGAAGGCGGCGAGCCCGATCTGGTCAT 500398 28 100.0 33 ............................ CAACCGGGTGTCGCGGTCCTCGCGGTCCTGCGC 500337 28 100.0 32 ............................ TGGAACGAGCCGGTGCAGGCCGGCCAGCACTT 500277 28 100.0 32 ............................ TTTGCTCTTTCATAACGACTCCTTGTTGTGGA 500217 28 100.0 32 ............................ TCAAACCGGCGCGGCGCTGGGGCCTCTGTAAA 500157 28 100.0 32 ............................ TGAACTGCCGCGAGTCCGCCTGATGAGCGACG 500097 28 100.0 32 ............................ TCGATGAAGCCGCGCTGAAAGAGACTCATCCC 500037 28 100.0 32 ............................ CACGGCGTCGAGCATGTCGCCAATGGGGTCTG 499977 28 100.0 32 ............................ AATCTGAGCGGATGGTTTCGATGAAGTCTGCT 499917 28 100.0 32 ............................ TTCGTGCCCTTCGTGAGCTAATCGGGCGAATT 499857 28 100.0 152 ............................ AAGGCAGAGCCGGTGCCTACGGGCGAGTTGACCTGCAACCCGCCACCCGTACCAAGGCAATAGAGAATCCGCGCAACCGAGAGGAAGCGCGATGCGCAAGAGCAGGTATCCGTTCAGAAAGTCCGCTCGTGCTTGAGAAACAATGCGCGCAG 499677 28 100.0 32 ............................ AGGATCACCAGCGTTGCCGCTGCGATCCATGG 499617 28 100.0 33 ............................ CATGCTCGCCGGCCCTCTCATCGCTCTGTGCTT 499556 28 100.0 32 ............................ GACTCATCGCGGCGCACGCCCTGCCAGCTGAT 499496 28 100.0 32 ............................ AGGCGCAGACATAGGCCGCAAGAGCCAGATAA 499436 28 100.0 33 ............................ TTCACCGAACAAGCCGACGCCGCCGCCCTTGCC 499375 28 100.0 32 ............................ AGCACGAGACCAATAGCGGCGAGCGCGTCGGT 499315 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================================================================================================================================== ================== 75 28 100.0 34 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : AGCGCCTGATGGAGGAAGACTGGCTCAAGGGCATGCGCGACCACACGCAGGTGGGCGAGCTGCTGCCAGTGCCCGCCAACGCACAGCACCGCACCGTGCGACGCCGCCAGTTCAAGACCAACGCAGACCGCCTACGCCGCCGCCGCATGCAGCGCAAGGGCGAAACCGCCGAGCAGGCCGCAGCTGCTATCCCCGACACGGTAGAGCGCCGACCTGACTTGCCGTTTGTGCAACTGCGCAGCAGCAGCACTGGTCAGTCGTTTTGCTTGTGCGTGGAGCATGGCCCACTGCAACCGCTGCCTGTGGCCGGGGCCTTCAACGCCTATGGCTTGGGGCATGACGCGACCGTGCCTTGGTTTTGAGCCTGTTTGACCCTTTTTTCAGGGGCCATGGCAGGGCCTTGTGAATCAAGCACTTACGGAGCACCCTAGGAATTGGGGTGTTCTGGCTTTATGGGGGAATGTTCTTTAAAAACAGAACGTTGGGTGGGATAGGGTCCA # Right flank : AACGCAGGAGACGTTTGACATGAACTACACTCCACCCAGCCCGCCCGAACTGCTACTGGACAACCAACTGTGCTTCGCGCTGTATTCCGCGTCGTTGGCCATGACCAAGCTCTACAAGCCGCTGCTCGACACCCTGGGCCTGACCTATCCGCAGTACCTGGTGATGCTGGCGCTGTGGGAGCGTGACGGGCTCACCGTCTCCGAGCTGGGCGAGCGCCTGTTCCTCGACTCGGGCACGCTCACGCCGCTGCTCAAGCGCCTGGAAGCCGCAGGCCTACTGGTGCGGCTGCGCGACGTGCAGGACGAGCGCCGCGTGCGCATCACGCTCACCGGCCAGGGGCGTGCGCTGCGTGATGGCGCCCAGCCCATCCCGCACTGCGTGCTGGCCCGCACGCAGTGCACACCCGCCGACATTGGCGCCCTGACCGCGCAGCTCCATGCGCTACGAGACCGGCTCGTGCAGCCGCAGGCCTGACACCGTTTTCCCTCATGCCCCCGTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //