Array 1 301519-300453 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CCCS020000035.1 Acidithiobacillus ferrivorans strain CF27, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    301518	    29	 100.0	    32	.............................	TAAAGGCTACAGCGATTATTAGCACAGCCTGC	
    301457	    29	  93.1	    32	...AT........................	CTTATGGTCCTCCTTTCCCGGTTCCTGCCTAC	
    301396	    29	 100.0	    32	.............................	CATCCATCAGCGCATCGCGTTGGTCCTCATCC	
    301335	    29	 100.0	    32	.............................	GATGGCGGTCCCCTGGAATCCGGGCAGAATAC	
    301274	    29	 100.0	    32	.............................	AAGGATGCGGTCGTTCCGGTAGAGCCGGATTG	
    301213	    29	 100.0	    32	.............................	ATACCGGCACGGCTTCCGCCATCGCAGGCAAT	
    301152	    29	 100.0	    32	.............................	AAGGCGCTGACCCGGAACACGGGCCTGCGTTT	
    301091	    29	 100.0	    32	.............................	GATGATGAGCGCCAACCGTTCTTCCCGCAAAG	
    301030	    29	 100.0	    32	.............................	TTTGCCCGCGTGGTATGGGCGACCATCAAACC	
    300969	    29	 100.0	    32	.............................	CAAGCGTTGGACGCCCCGCCTTCCCCCTGGCC	
    300908	    29	  96.6	    32	............................A	GGATATTGATCTTCCGCGGTTTCTGGGGTTGA	
    300847	    29	  96.6	    32	............................A	AAGGAAACTGAAATGAAAACGTGGATTATTGT	
    300786	    29	 100.0	    32	.............................	AACGATCGGCGCAGCTGCTCTACCAGCCGCTG	
    300725	    29	 100.0	    32	.............................	TGGTGAAGAACTCCTTATCCTGGCCTTTGACT	
    300664	    29	 100.0	    32	.............................	CTCGGGGGTCATGGCAGGAGCAAACTTGTCTT	
    300603	    29	 100.0	    32	.............................	ATGGACGGGGGCGCTACGTGGCGCAGGTTTAC	
    300542	    29	  96.6	    32	..T..........................	CCACACTCTGGGGTGCCCGTCGGCGTCCTAGT	
    300481	    29	  79.3	     0	A.........TGTAG..............	|                               	
==========	======	======	======	=============================	================================	==================
        18	    29	  97.9	    32	GTCTGCCCTGCACGCGCAGGGATGAAAGG	                                	       

# Left flank :   TGAAATTCAGGACGGTGGTGCCGCTGGCTTTTGAAATAGCGGCAAGTCGTGGTGATGATAAAGACTTGGCAGGCATGGTGCGTCGCGCCTGTCGAGATTTGTTTGTAAAGGAAAAGCTGCTGGATCTGCTGGTGGATATTATTCAGGAGGTGATTGGTGCCGTGGATGGTAATCTCGTTGATTAAGCCGGAGGCGGCATTGCGTGGTGCGTTGTTGCGCTATTTTGTGGAGATCCCCGTGCATACGTTCGCAGGCAAGATTGATCGCCGTCATGCGGACGTGTTGCTGGAGAAAGTGCGCGGAACGCGAGGTAAGGCGGCTATCATCACAGCGAAGAATAATGACAGCGGATTTGACATAGAATTAATAAACAACAACAATTGTTTTGTTATTGATTACGATGGTTTAATGCTGATCAGTGCAAAACGTCAACACATTAAAAAATCGGTGATTTCGGATATCGGTAAAAACTCGTTGTGAAACGATGTGTTGGAAGAAGC
# Right flank :  AAAGGTGTTTACGGGATAACTACCCGCCCCGCCTGCGCGGGGTAAAAACAAAGACCGGGATCAAATTGATCCCGGTCTTTTTGTGCAAATCAGGCAAAGAACCATCCTTTTTACCGGCCAAAGTCATGTGCGAAAAGTCCAGCATAAGCGGATGCGTCAGGTAATGTAGCTTGATAGCAAAGGAAAGCAAGGCGAGGAGATTTCTGATGGACCTGTTGGTGGTGACAACTGAGTCAGTACCCGGCTATCGCGTCCGCGAAGTGCTGGGGCCGGTGTTTGGGACGATGGTGCGGTCCCGTAACGTGGTAGGCACCAGTCTGGGCGGCATCGCCGCATTCTTCGGCGGGAAGCAACACGGTGATCGCAACATGGTCAACCAGACCCGCGATGACGCTTTGACGGAGTTGCGATCCAACGCGCAGGACCTGGGAGCCAATGCGGTTCTCGCCATGCGTTTCGACAGCGGCGAGTTCGATTCTGGACAGGGGACCATGATGGAG

# Questionable array : NO	 Score: 3.16
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTGCCCTGCACGCGCAGGGATGAAAGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-10.60,-11.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.42   Confidence: HIGH] 

# Array family : NA
//