Array 1 3-586 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000016.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 80 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 157 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 233 47 100.0 30 ............................................... CTGGGCGGACAGAATGGATAGGTAGGAGAG 310 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 387 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 463 47 100.0 30 ............................................... CTGGGCGGACAGAATGGATAGGTAGGAGAG 540 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : GTG # Right flank : TATGTTCCGGCTGTGTCCGGCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 158426-158571 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000022.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.21, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 158426 24 100.0 37 ........................ AACAAAAATACTAAGTATTTGTTTGATAAGCAAGGAA 158487 24 100.0 37 ........................ GCTTTTTGTGGCTTGAGTTATGTACCTTCATCATGAA 158548 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ===================================== ================== 3 24 100.0 38 ATTCCCAATATATTGTGAATTTGA # Left flank : CGTGTCGGTATGTGCTGTAGCTAATAAAATACCAAAATCATCTTTTTCATCAATCTGCAATAATCTTGCCTGAACGATGCGGTTGTGCCCTTCTGACAGCATGTTGGCAAAAAAAGGAAATAGATAATGGGAAGTATATTCCTGTTGTTGTTTTGTCAATGTCAGGCTTATGGAGGGCTTTGATGGATCATTGAAATATTCGTCATCATAGCGAAATTTATATTCGTTAGAAGATAATTCCGTAATAATGCCTACCCGTTCTTTATTCAAGTATACGACTCCTTGTCTCATAGATATCCCTCCTTATTTTTAATTTTCAGAGAAAGTTCTAATCCTAATACCTCCAATATGGCATAGAGCTTTTGAAAATTAATATTTATTTCTCCATTTTCAATTTTTGTTATAGTATTGATACTGATTTGTGCTAAATCGGCAAGTGTTTGCTGATTTATACCCAACATTTTTCTTCGTTGGCGAATCTGTATTCCAATTTGTTTCAT # Right flank : ATTACGGCTATTTGTACTTTTGATTTTAGAATGACAGAGATTTCTTTTTGTTTGTAGAGTGTTTCTCAATTAACATTGTTAACGCCATTTCTCCGTTATTTTATTCTTGTGTGCAAATAACAAGCCTTTTGCATTGAAAACACTTGCTATTTGCATTTAAAGAACAAGCTTTAACGTAGCGTTAAAACAAAGCTTTGGACGAGAGAAATCTTGTGCTTTAAAAACACTGTGTTTTAGTTCGTTAAGCACACTTTTTACTTCTTTGTTTCGCTGAATCCCTTTCTGGTCAAAAGCCTGTATATTTGCTTTTTTGTCAACTACAAATAGGGGACTGACACTCTCTGCTACCTTCTTTTCGTCTTGTTTAGCGCCGCTATCAGGTATCTTCCTTTGGCTCCGATGTCGCTCCAGCAAGTGTTGGCAATCAGTTTCCATACCGTCGTTCCCTTCCTCCCATAGTCCGACAGCCTGAGTATGGAGTTTACTTCCCCGGTGTCGGT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCCAATATATTGTGAATTTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 721422-720811 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000031.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 721421 29 100.0 34 ............................. GAACGAAAAGGCGGGCTGGATTTCAGCGGACTTC 721358 29 100.0 36 ............................. GGAAATGGCGGAAGGATTGGCCGTCAGGGTAACTGA 721293 29 100.0 37 ............................. TTAATCATCACATTGATCTTCTTAATCGCTTCATCAG 721227 29 100.0 34 ............................. CCGAGTACTTGTACATCGTACAGTTTCCCTTGCT 721164 29 100.0 34 ............................. ATACACGCCGGTCTTCGGTTCGATGGCGAATACG 721101 29 100.0 36 ............................. TAAATAGCTCGGCAAGTTTTACGATCTGTGTAATTG 721036 29 100.0 35 ............................. AAAAGAGAGCACTTGATGCAAACGAAAAAGAGCAG 720972 29 100.0 37 ............................. GTCCTAAACGAAGGTCAACAAACCAACTTTCATCGTT 720906 29 100.0 37 ............................. TTGTGCAAAATGCAAGATATTACGATGTGCTGCACTG 720840 29 93.1 0 .........................G.C. | A [720816] ========== ====== ====== ====== ============================= ===================================== ================== 10 29 99.3 36 GTATTAATTGTACCTTATGGAATTGAAAT # Left flank : ACCGTTTAAAATGTACTGGTAGATATGTATGTTATTTTTGTTTATGATTTTGGAGAAAAGAGGGTCTCAAAGATGTTGAGATTATGTCGTAGGTATTTGAATTGGATTCAGAATTCTGTATTTGAAGGTGAACTTTCGGAAGTACGTTTAAAAGAGCTATTATTATTAGCAAAAGGGGTTATGAACCCCGAAGAAGATTGCATTATTATTTTTAAAGGGGCTACTCAATGCTCTTTGGAAAAGGAAATAGTGGGCAAAGAACTTGCTAACATTGATAATTTTTTGTAAGACGGTTGTCGAAGTAATTTGTTATTGTGAATTATCAATGGTAAAGTAACGGAAACGCTCTATGACATGTTGATATATAGATGTTTAGTACCTATGTCGCTAACCTATGTTTTTTATATTATTCTTGATCGACACATTATTTCTAAAGAAAAGCAATTTTCTGCAAAAGCATTTGGCTTATTACTAAGTAATTGCGTTGATTGATGGGTAGA # Right flank : AAGGAAGATCTATATTTAAAGGTTGGCTTAAAACTCTATCGGATGAAATTTTTTCTTCCTTGCTAGCAACATCCCCCATTATCCTTTGGGAAATGTTTTTATTTATCCTATTTCCTTTTTATTAGAAAACAATCCTTATATTTGTCCGTGTATTATTAATTTGATGACAAATGACACTTATGAAGACATTGAATTTTATGAAAACGCTATTCTTATTGGTAGCTATAGTAGGCCTAAGCTCTTGTGGTGACAAGTATTATTCAGATGATTATCTACGAAATAGCAATGCAAAGCTCTGTGGCAAAACCTGGGTGAATGATTCGGAGAAGAATGATGTAGACGAGTGGGTTCGGCATACATTGAAGTTTGATGATAACGGCCGGCTGGCAGAGACTTATGCCTATTATCATGTAAATGAAAGTCAGCCTTACCGCACGGAGACCAATAATCTGACCTGGTCGTGGATAGACGATACGATGGAAGGTATTGTTTTTGACTAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 1036-2158 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000044.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1036 47 95.7 30 ...A......A.................................... GATTCGAAGATATGCAAATGTAGCAAGTAT 1113 47 100.0 30 ............................................... CCATCGACAGTAGTCATAAATTGTAAGTCA 1190 47 100.0 30 ............................................... CCAAAGACGCCAGGTATTCCTTTACCTTTT 1267 47 100.0 30 ............................................... CCCTACCGTTGCAATAGCTACAATCATGTC 1344 47 100.0 30 ............................................... TATGCTGTCCTGCTGTACGTGCGGCAATCT 1421 47 100.0 30 ............................................... ACCAGTCAAAGATGAACCACTGATAGAAGC 1498 47 100.0 30 ............................................... AGTAGTCATCAATTGAAGATCAGGGCCGGT 1575 47 100.0 30 ............................................... CACCAGCCTCAGAACCAAGAGAACCAACGT 1652 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 1729 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 1806 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 1882 47 100.0 30 ............................................... AGGAGATGTAGGGGAACAAAGAACCATTCA 1959 47 100.0 29 ............................................... TAGGTTTCAGGTTGAGCCAAAGAGAATGT 2035 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 2112 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 15 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TCCAGGACGAAAATAACAAGGCTTCTGCTTCTAAAAGCCTTGTTATTTGGAGACAAAAGACTTGATTTAACAGGGGGTTAAATCAAGTAATAGGAAGAGAAGAAAAGAAAGGAAGAAAAGAATTGAAGATGAATACAATAGAGAGACAAAGGAGTGTTTACTGGGAGAAGGGATAAGTGCCGGACCGAAAGGGATAGTTGTGATTAAAGCAAGTATGGGGGCAGGGAATTTTAAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC # Right flank : TATGTTCCGGCTGTGTCCGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 661-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000010.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 660 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 583 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 507 47 100.0 30 ............................................... CTGGGCGGACAGAATGGATAGGTAGGAGAG 430 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 353 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 277 47 100.0 30 ............................................... AGGAGATGTAGGGGAACAAAGAACCATTCA 200 47 100.0 29 ............................................... TAGGTTTCAGGTTGAGCCAAAGAGAATGT 124 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 47 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : | # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 23-2443 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEE01000045.1 Bacteroides fragilis str. 1009-4-F #7 gbf10094F7.contig.44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 23 47 100.0 30 ............................................... AGGAGATGTAGGGGAACAAAGAACCATTCA 100 47 100.0 29 ............................................... TAGGTTTCAGGTTGAGCCAAAGAGAATGT 176 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 253 47 100.0 30 ............................................... TATGTTCCGGCTGTGTCCGGCAATAGACAA 330 47 100.0 29 ............................................... GTTGTTATTCGTTTGGAATCTGCGGTTAT 406 47 100.0 30 ............................................... AGGAGATGTAGGGGAACAAAGAACCATTCA 483 47 100.0 29 ............................................... TAGGTTTCAGGTTGAGCCAAAGAGAATGT 559 47 100.0 30 ............................................... ATGCTGCTGACTATGGAGCATACACCAGTC 636 47 100.0 30 ............................................... CAAACAGTCTGAGAATGTGCTGAAAGTTGA 713 47 100.0 29 ............................................... ACTTCTGCAAAAAACACTTCTCCCTCTTT 789 47 100.0 30 ............................................... AGGCAACGCCATTTCCTGAATCAAAGCAAA 866 47 100.0 29 ............................................... GGATTAATTTTAAACCAAGAGTAAGTTAA 942 47 100.0 29 ............................................... TTACCAATTTGATTAACAACACCGCCGGC 1018 47 100.0 29 ............................................... AAATGAGAAATCTATTATTAAGGCTGTGA 1094 47 100.0 30 ............................................... CTGGTAAAGTGGCGAAAGCACTTTGCAATG 1171 47 100.0 29 ............................................... ACGAATACGCCTCAGTCAAATCAGGCTGG 1247 47 100.0 30 ............................................... TTGCTTTGTCCGTTCATTGAGGATCAATTT 1324 47 100.0 29 ............................................... TCAGCAAATGCAATACACCGCAATTCCTC 1400 47 100.0 30 ............................................... GTAAATTCTGCATTGATTTATTCCCGGGTA 1477 47 100.0 30 ............................................... GTGCATCTTCAAAAACTGTGACAATTTGAT 1554 47 100.0 30 ............................................... AACACGGTCAATATTAACCGCATCACAAAG 1631 47 100.0 30 ............................................... CACCTCTTTTAAATCTTCTTTCTCTATCTT 1708 47 100.0 30 ............................................... AATAACCTCTGCATCTGCGTAGGGTCATTA 1785 47 100.0 30 ............................................... TATACCACGAAGAAAAGCGTTATCGCAATA 1862 47 100.0 30 ............................................... CGTAAAGGCGTACACCTTCGTAGACGTTTG 1939 47 100.0 29 ............................................... AATAGTAGTGCTCAATCTACGTCCAGCCA 2015 47 100.0 29 ............................................... ACGCTTTTAGAGCGTACAAACTTCTTCGA 2091 47 100.0 30 ............................................... AATGAAATATTGAACAAAGAACCAACGCGG 2168 47 100.0 30 ............................................... ATGATCAAAAAGAAAGTCACCAACAGGGTT 2245 47 100.0 29 ............................................... ATCTATTTTAAAGAAGGTGGAGTTAAAAC 2321 47 100.0 29 ............................................... AACTATTAATATACGATCTCAGCTGCATA 2397 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 32 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTCGTTTGGAATCTGCGGTTATG # Right flank : CTTACTCCGCATAACATAATGTTCTTCAACAAGTTAAGAATAAATTAGAAAAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTATTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGCCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //