Array 1 331305-330944 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000015.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 331304 30 100.0 33 .............................. TTAAAGTCTGGTGTACTGTTCTTCTTGTCAACG 331241 30 100.0 35 .............................. CGCTGCGTCGAACACGGCACCCTCGACAATCCCCA 331176 30 100.0 35 .............................. GGGTTGTGGCTACGGCCGATCTCGTCCAGGTAGAA 331111 30 100.0 39 .............................. ACGGGAGCACCTGCGGCTCCTGAGCCGTAGTTCATGCTT 331042 30 100.0 39 .............................. TGGACGGTCGGGACGATCTGCATGTCCGCGTCCCACAGG 330973 30 93.3 0 ..............A....A.......... | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 98.9 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGCAGCGTCGCCTATGACGAGCTGTTGTATCTGGAAGCGCTGCAGCTCACCCGCACCTGCCTGGAAGGCACGCCGTACAAGCCGTTCCGGATCTGGTGGTGAGGCCGCGTGTACGTGGTCGTGGTTTACGACACCCTGGCCAAACGCAACGCCGCGATCCTGCGCCTCTGCCGCCAGTACCTGCATCACGTGCAGAGAAGCGTATTCGAGGGCGCGCTGAGCCCGGCACAACTCCGACGTTTCCGACACCGGGTCGAAGAGGTGATCGACCAGTCGTACGACAGCGTGCTGGTCTTCACATTCCCGCCGGGCACGACCCCGGAGCGCCAAGAATGGGGCGTACCGCAGCCGGCGCCCACCGACATCCTGTGACGGATACCACTTTTGATCATGAATGTGCAGCGAACCTCCCGGGCTTCATGCACGACCGGAGGTTCGCTGCAAAACCCGGCCCCAATCCCGCCAGAAAGGCCAGCACAACCTGCGGCTTTATACTGGG # Right flank : CAAGGCACGACCAGGGCGTTGGCATCGAGCCTGGTGAGGTCCTTATGCGGCCGGCGACAAGCTCCTGACCGCCGCGATGCTGTGCACCTGGGCGTACGGCTTCGCCATGGTGGACGGCACCACCGGCCGCTCCTATCTCGCAGTCATGGACGAGCTGTGGCGGGCGCTGCGCGGGGCGCCGGGATTGGTCGAGTACGCCGACAGCCTGACCCGGCTCAACCGCGCCAAGGGCATGGCCTCCATCATGATCACCCATTCGCTCGCCGATCTGGAGGCACTGCCCACCGAGGAGGACCGGGCCAAGGCACGCGGCTTCATCGACCGCAGCGCCATCACCGTGCTGGCCGGGCTGCCTCCGCGTGAGCTGGCCCGCGTCAGCGAGATCACCCGCCTGACCGGGCCGGAGCAGGAACTCGTCGCTTCCTGGTCCGCACCGGACTCCTGGCAGCCGGGCGTACGGCACCCGGGTCGCGGCAAGTACCTCATCAAGACCGGCGACC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 107317-106738 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000017.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 107316 30 93.3 31 ............................GA AACCGATAACCCAACAGCTTTGGTTTCTGCG 107255 30 96.7 31 .............................A GAAGGGCATGCGGCGGTGAGGATGAACGCGA 107194 30 96.7 31 .............................T CGTGGTAGCTCCTCGCCTTCCAGACCATGTG 107133 30 100.0 31 .............................. GGGAGCGCGGCGGCAACAAGGTGTGGCCGAA 107072 30 100.0 31 .............................. TGGGCACCGGCCAGTTCTCGGCCGGGGCGCC 107011 30 100.0 31 .............................. GTTCGGCGGCCGAGCGGGTCCGGTCGGCGGT 106950 30 100.0 31 .............................. TGAAGGGCTCCTGACGCCGGTCGCATGCGAC 106889 30 96.7 31 .............................A GGACCACGCCCAGGAGCCCAATCGACGGATT 106828 30 93.3 31 ......................G......G AATCGGTGGGGGTGAATTCGGCGGTGCAGCC 106767 30 83.3 0 ............T.T......G.....G.T | ========== ====== ====== ====== ============================== =============================== ================== 10 30 96.0 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Left flank : TTGTCCTGCCGGCCTGCGCGGTTTCCTCACCCGATGGCTGATGGAAATCTCGCCCGGCGTCTTCATCGGCGGCCCTTCCGCACGTATTCGGGAAGCGCTGTGGAACGAAGTGCAGCACTACGCCGACACCGGTCGCGCCCTTCTCGCCTACACCACAGACAACGAGCAAGGCTTCACCTTCGAGACCTACGACCACAAGTGGCATCCGGTTGATCACGAGGGACTCATCCTGATACGGCGTCCCAAAGACGAACCAGTCGTAAGTGCCGCACCGGTTCCCTCTGGCTGGAGCAAGGCCGCAAAACGCCGCCGCTACGGCCGCTGAGGCTTGGCTATGCCGGGTAGAAAAACCGCATATACAACTCCGCAGGCCGGTGTCAGCGTCGGACTACCTGGCCGTGGCATTCTGCAGCAGGAGTAGGAGAGTGTCCGAAATGTCAGAATTCTCGATAGTGCTCAAAACTGAGCCCTCACGCCGATAACACCGCAGGTCAGCCAGT # Right flank : CACCCTTGTCCACCGGAAGTGTGTGCACAGCCTGTGGATAAAAATCGATGGATTACTTCGGTGCGTGACGGGGAAGGAATGTCAGTCCCCTTGCCGCGCCGTACGCTGGCGGTGTGATCGTGGGCATTGGGGTGGACGTGGTCGAGGTGGCGCGTCTGGGCGCGGCCCTGGAACGCACGCCCGCGCTGCGCAAACGCCTGTTCACCGACGCCGAGAGCGCGCTGCCGCTGGAGTCGCTGGCCGCCCGGTTCGCCGCCAAGGAGGCCGTGGCCAAGGCCCTCGGGGCTCCGCCCGGCCTGCGGCACCTCGACGCGGAGGTCGTGCGCGGCGAGCTCGGCCGTCCCGAGCTGAGAGTCACGGGCCGCGCGGCGGAGGTGGCCCGCGACCTCGGCGTACGCAGGTGGCACGTCTCCCTCTCGCACGACGGCGGCATGGCGGTCGCCTACGTGATCGCCGAGTCCTGAGGTCGATTCCCCCGCATACCTCGGCCGGGCCAGCCA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 116927-117323 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000017.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 116927 29 96.6 32 ............................G AAGGTCGAAACCCATCCCCTCGCCAGGGTCGC 116988 29 100.0 32 ............................. AAGATCAGCTTTTTGGGGGGTCTTCTGGGTAT 117049 29 100.0 33 ............................. AGCCTCCTAGGGGGGTCCTAGCAGACTGGACGA 117111 29 100.0 32 ............................. GACTGCGACTGGCCGTTGCTGCCGAAGTTGTC 117172 29 100.0 32 ............................. TGCTGGCCCGCCGTGTTCGGTCCGGAAGGGTT 117233 29 89.7 32 ..............T....A.G....... TTGCCGCTGCCGCCAGGCATGGTCATCGGGAC 117294 29 82.8 0 ..............T....A....T..TG | C [117317] ========== ====== ====== ====== ============================= ================================= ================== 7 29 95.6 32 GTGCTCCCCGCGCACGCGGGGATGATCCC # Left flank : GGACAGGGACCCACTCATCCCACAACAACCCGGCTACGGCCCCGCTGTCAGCCATATGCCGCCACAACGGCAACCAGCCGTCGCTATCGCGATCATGCTTAGCCCACACCGCTCGCGCCGCGCTGGATAAATTTTCGACAAACGGATGCGACAGCCCTGAATTGAGCATGCACACATCTAAGCTCCCGCCTGACTACACAAGCACCTCAACAAGAGATCCTTGATCAGATTGATATTTATACATAGTTAGATAGTCCCACTTCATCCACATTGTTTATAAATGTAGTGCTACTAATAGAATCGACGCTTACGTTCCATATGCGGCGAAGGTGTGCTTACATCCACTGCCACGAGCGCTCGCGTTGGCCCCCTTGGGCACCATCGGGCATGCTGAGGCGGTGAAGCATCGAAGGCTGGAGCGGGGCGGGCCCGAAATGTCCGAGTCGACGAAACTACTCGAAAAGCAGGCCCACAGCTCGCATCCTCCCAGGTCATGAAGT # Right flank : GCCTGGTGGGCCCGTCTGCTTACGGGTGGGTCTTTTGTGTGCTTTTGAGCACGAAACGCCTGGTGGCGTATCGGCTTTGATCCGTACGAGCCCCTCGATGCGGGCAGGCGAGGGGGCCTGGCTACGCTTGCCGTCGTGGCAGATGGGGACGCGTACGTCGAACTGAGCCGTGAGCAGTGGAGCGACCTGCGCAAGAACACACCGCTCACGCTCACGGAGGCGGAGCTGGAGGAGCTTCGCGGCGTCCACGATCCAATCGACCTGTCCGAGGTCACCGACATCTATCTGCCGCTCACCCGGCTGCTGAACCTGCATTTCACGGGGTCGCGGCAGCGCGGCGCGGCCGTCGGCGCGTTCCTCGGCGAGCAGAGCGCGCCCCCACCGTACGTGCTGGGCATCGCGGGCAGCGTCGCGGTCGGCAAGTCGACCACGGCGCGCCTGCTGCACGCGCTGCTCGCCCGCTGGCCCGAGCACCCCCGCGTCGATCTGATCACCACCGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 81077-81952 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000043.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================== ================== 81077 30 100.0 79 .............................. GTGAGGGGTGCGCCGGTGATGAGGCGGGCGATGCGGTCGAGGCATGCGGCCATGCCGCGGCGGCCGTCGCCGTCGCGGA 81186 30 100.0 38 .............................. TCAGACGGGATGCCTCTCCCTGCGGGGACCCGATGATG 81254 30 100.0 37 .............................. AGGTCCGCGTCCCACACGTTGTGGCCGGTGACGGGGC 81321 30 100.0 38 .............................. ACGGTGGGTTTGACGATCCGGAAGTTGACCCGGCCGTA 81389 30 100.0 38 .............................. ACCAGTCGCAGCGGCTGATCGGCGTGGGCATCACCCCC 81457 30 100.0 36 .............................. GATGCGGCCAGCATTGAGGCGTACGGCGCGTACAGT 81523 30 100.0 33 .............................. CGGTGCAACTGCTGGACGTAGTTGACCGACACG 81586 30 100.0 38 .............................. GCGAAGGCCTTCTGCATGTCCTTCGCGTTCAGGCCGAG 81654 30 100.0 39 .............................. GTGGTCCGGACACGCTGCCCGATGGTGTACATGATCAGT 81723 30 100.0 36 .............................. TTTCCGCAGAGGCTGACGCCTTTCGGAAGTGCGTAA 81789 30 100.0 35 .............................. ATCAGGATGTCGTCGTACTGGCCGACGACGCCGGC 81854 30 100.0 39 .............................. AGATACCGGGACGTGACGGGTTTCGCCTCGATGGCGCCT 81923 30 73.3 0 .............TC.T.G...CA...C.T | ========== ====== ====== ====== ============================== =============================================================================== ================== 13 30 97.9 41 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CGGAGCGCTTGCGGCCCAGTAGTCGCGCGAGATCATCCCGCATATATCCCGCGCGGCTGATCGGTTGCCGTGGCAGAGGCACACCCGAAGACCAGCTCTATGCCCGCACATGCAAGCTCGGCCGATCATGGTTCCGGGCAGTTCCGAGGCAAGTCGGCGGATCTACGCGGTCCGTCTAGAACCGCCCTGAACAGCCTCGTACTGCAACTCAAAGTGCAACTAACGGCGCTCCGTTGGGCCGGGGCTGAGGAACGAAGTCCCGGCCCGTCGATCGCCCCCAGCCACATACAGTGACCGGCCACCCCGGGCGATCGTGAGGCCGCACCACTTATCTGCCCAATATTCGGGTTCGGTGACATGGACCGACGCCGGTGGCATCATGGTCAACCGGACGGTGTTGCAGCAGACCTCCCGGGTTTTCTGCACGACCGGAGGTTCGCTGCAAAAAACCGCCGTATCGCCCCATTGGAATGCCCCGTGAGCTGGGACTTTACTTTGGG # Right flank : TGTTGCGGGCAGTGCGGCCCAGGGTGGTGTGTTCCGTAGGCGGCCCGAGCCGCCGACGGCCGGGACCGGCCCCCAGGCCGCACGCCCGGCCGGCGGGTGGGCGATGGGCCGCTGCGGCGGCGCGTAGCGCCGCCGCCTTGATTCCTAAGAGCGTATTTCGGCAGCGTTCGATCGCTTAGCCGCCTAGGAGCTCCGTTATGATTTCAGCGATCTCTCTAGAGAAGCTCTTCTCGGCAAGGGCCTGCCGCGCCTGACGGCGAAGGACGGTGAAGTTGCCGCTTTCATTAATATCTAGCCCGGCCACCACTTCGGCCTCCGCGCGCCCTAGGGCTGAAAGCTGCCGATGTACAGGGTCGCTGGCTCTGTATGCAGGGATTGGTAGCTTCCATATGTGCTTATCAATGTGGCGCTCGTCTTTGCCGTACGACATATATGGGCGGACGAGATCGGTGATCGCGGGGGAGTTTAGGATAGCGCAGAGGAAGTAGCCCTCGTCCGAA # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 94285-94652 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000048.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence048, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 94285 30 100.0 39 .............................. GCAAATTCGGAAATCTCTTCCGACTGCGCCGTCATAGCT 94354 30 100.0 39 .............................. ATCCCGCAGCATCACGCCTTTGCGGGGGCTGGGGAGCTA 94423 30 100.0 36 .............................. ACCCGCACCCGGGAGCAGATGGCGACCGACCCGGAT 94489 30 100.0 37 .............................. ATGACGTACCGGATGCGGCGCAGGTTGCCCTCGCGGA 94556 30 100.0 37 .............................. GTTACGTATCTCGCGTGCGTTGGGCTGGTCTAGATGA 94623 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 100.0 38 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGGCACGGGCCAAGACGAGTTGTTCGCGCGGTCTTCACCGACAGCCCCTTCGACCTGGTTCAGGCCGAGGCCCAGCACCGCGATCACGCGATCAACGAGCAGGTCAACGCCGATTTCATCGACGGGCCGCTGGCGCGCATGCCCTCGGGTGTCTTCATCGCCAACGCTGCGTGGCTGACCCTGGCAGTGATCGCCTACCATCTGTTATGCGCCCTCGGTTGCCTGGCCTCGGCCTTCCACGCCAGGGCGCGCGGGGTAACACTACGCCGCCAGCTGATCACCACCCGGCCCGCATCGCCCGTCATGGCCGCGGCCACATCACCGTGCACCTACCCGGACACTGGCGATGGCAGGACGCCTGGATGAACGCCTTCGAGGTACTCTGGACGACGGCGTTTGCAGCGAACCTCCCGGGCTTCTTGCACTACCGGAGGTTCGCTGCAAAATCCCGCCCCGGGAAGTGCGTAGCCCAGCGCTTGAGCTGCGCCTTTACGGTGGG # Right flank : CCGGAGCAGTTTTCCCAGCGCGTGCACTGCAGCTACGAGCGGCGGGTATGTGACACGGCGGCCGGCGGGAAGGAGGTGGTGCTTCACCTGCGGGTACGGCGGTGCCGATGCGGGAACGACGACTGCACCGGAGGACCTTCGCCGAGCGGGTGCCGAGTCTGACCGTCCGCTATGGCCGCTACTGCCTCCCACTCCGCACGCTGCAGGCGGTCGCCCCCGCCTAAGGCGGCCGGGCCGGTACCCAGCTCACCCAGCCCCTTGCCGCCACGGTGAACCGGATGACGTTGATCCTGCTGATCCCGTATCCGCCGAAAACCCCGGGTGCTTGGGTTGGATGGACGACTTCGCCCTGTGCTGCGGCCGTGCGTACGGCACGATTCTCATCGACATCGCCGCCAGCCCGGTGGTCGACGTACTTCCCGAGCGATCAGCCGACGCGCTGGCCGCCTGGCTGCGCGACCCGCCCTGCGATGGGGATCTTCTGCCGGGACAGGGCCGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 109227-108666 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOE01000048.1 Microbispora rosea subsp. aerata strain NBRC 14624 sequence048, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 109226 30 100.0 35 .............................. TCGGGCGGGCCGCCCAGACCGCGGCCCGCGTGCCC 109161 30 100.0 35 .............................. ACTGGCAGATCGACCAGGCGCTGAAGCAGATCGCC 109096 30 100.0 39 .............................. GCGATGGCCTTGAGGGCGGAGGACTTGCCTGCTCCTGCT 109027 30 100.0 36 .............................. AAATCGCGCCGGAACCGCTCCGGATCGGCAGCGTAT 108961 30 100.0 38 .............................. ATGATCAGCGTGGCTCTGTCGCCCAGGCTTGTGCCGCC 108893 30 100.0 35 .............................. GACAGGGACCCTCCCGGCAGGACCGGAGTGTCCGG 108828 30 100.0 36 .............................. TGCGCGAGCTCAACCACGCGGGCCGCCTGGCTGCGG 108762 29 93.3 38 ..................G....-...... ATCCACCGCTGGTAGTACGCCTGCGCGATCTGCGCTGA 108695 30 80.0 0 ...............GA........CTTC. | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 97.0 37 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : GCCGCGTCGCCGCGTGGCCTGCGGGAACACCGGTGCGCTGTGCCCCATCGGGACCATGCCGTACGGGCCCACTCCCTGAGAGTGGAGCTGTCGCCCCAGCTCGGGCGCCTCTCGCGCGAGCAGGTCGTACGCCAGGGAACGGCCGGGCGCCAGCACCTTCGCCCACGCGAGTTCGGTGGCCGCCGTGGTGACCTCTATCCGTAACCTCACAGGATCCTCCCTGCATTCGCCTTTCACTAGATACAGATGGACGACGGCGGGCACGGGCCGCGTACGTGGGCGTTTGCGCAGGTAGGGGGAGGAAGAGTTATTCGAGGCGTGTGTCAGGGCGCTCGCGTGCCGGACAACCGGCTACCCTTCCTGAGAAGGTGCCGGGGAGCTGATGGCGATCATGATTTTGCAGCAAACCTCCCGGGTCTTCTGCACTACCGGAGGTTCGCTGCAAAATGCCGCCGCGAGGCGCCGGTCTTGCGCCGCCTCACCTGCGCCTTTACCGTAGG # Right flank : CACGAATCCCTGACCTGAGTTCTTGCAGGTCAGGGGGACTTCGCCCTGATCTTTGCGTCTCGTCCATCTGTAGTAGGTGAGAGCGAAATCGTGGGCGAGGGGGCGGAACGTAATGGGGATCTCCCGGGGGCGGACCGGGACGGGCGGGGCAAGAGCGCTGCTGGACTTTGTGTCGGGATGGGGGATCGTGGCCCTCGCCGGTGTGGCGGGCGCGGTGGCCGCCGGCACGGTTCCCGATGTGATCAAGAGCTGGCTGGGTGAGCAGCGTCCGTTCCTGACGGCGCTTTGCCTCGTGTCCGCGCTGACGTTCGCCGCCATCAACCTGTGGCAGCAGCGCAGCAAGGGCGTCGGCATCGTGATCTCCTTGCCGCAGACCACCTGGCGAGGGCCGTGGAGCAGCCAGTGGATGGCGGCGGCCGCCGACCATGCCCGGCGCCACCACGACTCGTGCTTCGTCGTACGGCGTGCCGTTCCGGCCGCGCGGCCGGGTGATGACGAAG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //