Array 1 79489-80775 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAUE01000050.1 Xanthomonas citri pv. citri strain FDC 628 XacA628CHR_ctg0028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 79489 31 100.0 37 ............................... AAATGCTTTCGACGCGCATAAAGCGCTGGCGCAGGAG 79557 31 100.0 35 ............................... CTGTTCAAGCTCCGCCGCCTGATCCGCTTGCCGAG 79623 31 100.0 34 ............................... CTCGGGTTTCGGGATGTGCTTCAGATCTGCGTCG 79688 31 100.0 35 ............................... CGCTGCACGGATGCGCCAGGCGGCGAGGCGATCAT 79754 31 100.0 36 ............................... TCGAGCGCATCGATGACGGTCACCCATCCCCCAATG 79821 31 100.0 36 ............................... GTGCCACCGACAGCGACGCACGTGGACCTGCAGATC 79888 31 100.0 34 ............................... CTCTCTCACGCCGCGCGTGCGAGATCCTGCGTGC 79953 31 100.0 36 ............................... GCAGACTGCCGAGGCCGGCATGCTGGAGGGGCGCCT 80020 31 100.0 37 ............................... GGGTTAACAACGCCTTGAAACGGCTTTGCCGCGACGC 80088 31 100.0 35 ............................... GCCATCATGCTTTGAATGCGCTTACCCACGGCGAA 80154 31 100.0 35 ............................... GCGGATATGTGATTAGACCCTTTTACGACTTTCAG 80220 31 100.0 34 ............................... TCATTGAACCCAAGGACCACTTCGCAGGGCGACT 80285 31 100.0 34 ............................... TGTCGAGCGCGCACTGCTGCCGCGATGGCCGGAA 80350 31 100.0 34 ............................... GGCTGGGAGCGTTACAAGTTTGAGCAGCCCGTAG 80415 31 100.0 35 ............................... TGGTTCAGGGCTGGAAAGACTTGGATGCCCGCATC 80481 31 100.0 34 ............................... CTGACTATCCCTGCATAGGCCACGACCTGCGAGG 80546 31 100.0 36 ............................... AAGAAGACCAGTCTGCGGCGTCGCGGCATCCTGGGG 80613 31 100.0 34 ............................... CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT 80678 31 93.5 36 T...........T.................. CATGCCATATGCGGCGAGATCGCACAGCAGAAGGAA 80745 31 96.8 0 .G............................. | ========== ====== ====== ====== =============================== ===================================== ================== 20 31 99.5 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GACGCGGCTCAAGTCCCATGATGATTCTTGTAAGCTACGACGTCAGCACCAGCTCTCCCGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGGGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTACGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAAAAAAAAAAAATAAATACATAGCGGATTCACGGGGTCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGGG # Right flank : CAATTTAAACTCGCCCCGCCAGCCGGACGCTGACGAGGTGCAGGTTGGACATGCTTGAGGCCTGCGTATGGCAAAGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGAACCATTATTTGACGATGATGGTCTGAGGCGTGCCTGCAGGCTTGCCGTCCACCATGACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCAGCCACCTGGCCATCCTGGTAGGTCAGCTTTGCCGACACGGCCACGTTGCTCGCGCTGCCGTCCGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTCGCCGGGGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACACTGGACACCGTCACTGCGCTACCCGTGGCAGCACCGCCATCGGTGCTGGCCGCACCGGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //