Array 1 4786-3353 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOCI01000355.1 Lactobacillus nasalidis strain YZ03 sequence355, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4785 29 100.0 32 ............................. CTCCATGTCGTCCTCCTGTACCATTATGGTAC 4724 29 100.0 32 ............................. GTCACGGTAGAGCTCACTCCGTTGCTCCCGAT 4663 29 100.0 32 ............................. ACGCCGCTGAAATCATCACCGAGCAACTTCAA 4602 29 100.0 32 ............................. ATGCTCCTTTTGAGCCTGAACCCAGCGATTGA 4541 29 100.0 32 ............................. ACCCCCCGTACCACTGTGTTAGTGTGCTAGCA 4480 29 100.0 32 ............................. GTCTCTGTCCATGGCTGCAGCGGCTAGTGCAA 4419 29 96.6 32 ............................C AGGTTAGTCTCAAACTTTTGCGTCTGTGGTTT 4358 29 100.0 32 ............................. CATCATCGTTATCACCCCATAAGTAAAAGCCA 4297 29 100.0 32 ............................. GTCATTAGTCATTTTTTGCATCCCCCTTAACT 4236 29 100.0 32 ............................. ATTTCTTTAGCTCACGGGGCCAGGTTCCAAAT 4175 29 96.6 32 ............................C GCAGCCTGGGAGGTTGCGTTTTTTTAATAGGT 4114 29 100.0 32 ............................. TCGGGACATCTGTAGAAGTCTGCCGGGACTAT 4053 29 100.0 32 ............................. GTGGTTCATTGGTGATTTAGTAAAGTTAGCAT 3992 29 96.6 32 ............................C CAAGTCTAAGGCCTGGGCCAGCTCTGCCGACT 3931 29 96.6 32 ............................C TCTGCTGCTGCCAGAGCTCAGATTTTCCAAAG 3870 29 100.0 32 ............................. TACCCACGTTGCATTGCCGCTTTTATCAACTT 3809 29 100.0 32 ............................. AACATCTTAATAAAGTAGAAATTATCCTGCTC 3748 29 100.0 32 ............................. ATAGAGCTGCACGAGGTTGTCGTCGCCAAAAC 3687 29 100.0 32 ............................. GTAATCCAGGAGGATCGACCTCTTGTTAAGGT 3626 29 100.0 32 ............................. TATGTGGGGTTATGGATCCGGATCAAACGGAA 3565 29 100.0 32 ............................. CATCAAGGCCATTCTTGAAAGACACGAAGGCA 3504 29 100.0 32 ............................. CTTGGCGCAAGCGGGTAAACTCGTTTACTTCA 3443 29 93.1 32 ............C...............C TCCCCCGTGACGCTCAACATGGACCAAATTTC 3382 29 82.8 0 ............C..........C..AAG | C [3355] ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.4 32 GTATTCCCCACGTAAGTGGGGGTGATCCT # Left flank : GGACTAAATACGGAAATTGATCAGATTTTGTCTATTGGTGCGGTGAAACACGATGGTACGGAATATTACCGATTGATCAAGCAAGACGTTGATGTGCCAAAACAGATAGTGGAGCTGACTGGGATAACTCCTGCAATATTGAAGAAGGAAGGCGTTCCGCTGCAAGATGCATTAGGAGAATTGGCTGATTTTGTTGGGGATATGCCAATCGTTGGATATAATTTTAGATTCGATTCTGCATTTTTGAATAGAGATTATCGGAAATTCGGGATGCAAGAATTGAGAAATGAGATTAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTCCTGGACAACTATAAGCTGCAGACTGTATTATCAAACTATGGGATCGAAAATAAGATGCCACACAACGCTGTGTCTGATGCAAGGGCTACGAAGGAGCTGGCGATAAAACTAATCAAAAATCGCATTTTAGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : TTTCTATTAAAAGGCGAGCAAAGTTCACGAATCTCTGGTAGAGTAAGTAGTAGAAGAAAGAATGATGAGGAAAAATTATGAGTATTTACGGTAAATATGCTGCTTATCTTCCAGAAATTTTGGACGATACGTTAAAGCAAATTCAAGAAATTAGTCAAGAATACAGTGAAAAAACGGGACAAAAGCTTTACGAACACCTTGAAGGACGTGTCAAGGGCGAAGAAAGCATGACTCAAAAATGCCAAAAGAAGGGTCTCCCGCTGACGCCAGAATCAGCGCTGATTGAAAACCGTGATTCCATTGGCCTCAGAATCGTATGCAACTTTATTGACGACATTTATACTTGCATCGATCTATTAAAAAAGCAGGACAATTTTAAAATCATCAAGGAGAAGGACTACATCACCGATGCCAAGCCAAACGGCTACCGGTCTTACCACTTGATCATGGAAGTAGTTACTCCGTTTGAAGACGTCCACGGCAACAAGCCAGGCACGTAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTAAGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //