Array 1 31-718 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWK01000061.1 Vibrio sp. V33_P6A3T137 scaffold112_size8841, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 31 28 100.0 32 ............................ TGCAAGGATGCACGTAAAATTAAGAAGTCAAG 91 28 100.0 32 ............................ GCTGGCAACGCTGCCACCGGGGAGTGTGTAAT 151 28 100.0 32 ............................ AGCACAGAAGCGCAAATTAAAGTTGAAGTGTG 211 28 100.0 32 ............................ ATATCGCCATACATCATAAGTATGCCTTTGAT 271 28 100.0 32 ............................ AGCAAGAACAACGCTTGCCATTCCAGAGTTTG 331 28 100.0 32 ............................ GTGTAGCGGTGACTTTGAAGAAAGATTGATTA 391 28 100.0 32 ............................ AACAACTTTGACTTTAAACCTTCAACCAATCC 451 28 100.0 32 ............................ ATTCTCGATTTGCCGTTCGTTAGCTCTCTGAC 511 28 100.0 32 ............................ TCAATCAGCGGTCGATACAATGTTTTCAGAGT 571 28 100.0 32 ............................ GTTAGAAGTAATCACACCGCCTAACGTAAACG 631 28 100.0 32 ............................ CTCCTTATCAGTAAATGCCGCCAGATTGGCAG 691 28 82.1 0 .......................CATTG | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACATGGAGAGGGTTTCGTTGTTGTATCACCG # Right flank : GTCACTGTAAAAGTCATAATTATTTATTTTTTGATATGCAATAGGTTATTGATAAGTGTCGATTCTTTATTGCATTAATCAATGTTACGTTCGGTATAAGCTTGGCTAAAGGGTATAAATCCTCACCTTTGGTTTTTTATTCAGCAGAATGGAACTGTGGAATGCGAAGACAGAACAACACAATTGATCTGCAAAGATTGAAAGAAGAACTCGATGATTTAAATAATAAGATTAACGATAAATGGGAAAGCTATTCATGCACCTTAGTTACGCCTATGTACGGTGGGGGTGTTAAAGCGGGCGAAGTCGATAACGACATGCCGATTCGCGCCAGTGCTATTCGTGGGCAATTACGTTTTTGGTGGCGTATTGCTTGTGGGGTGAAAGACCCTGAGGTCATGCGAGAAAATGAAGAAGCCATGTGGGGGGGGATTAGCGATAAGGCTAAAGCGAGCCAAGTTCAAGTTCGAGTGAAATGTAAAAATGTAAAAATGTAAGTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 149-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWK01000088.1 Vibrio sp. V33_P6A3T137 scaffold75_size17859, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 148 28 100.0 32 ............................ TTACATGGAGAGGGTTTCGTTGTTGTATCACC 88 28 100.0 32 ............................ TGCAAGGATGCACGTAAAATTAAGAAGTCAAG 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAATCGCATCAGCTTGATAACACCCCACCGCACGCAGTACACCACCGACATTGGTTGGGCTTTTCGGGTTACATAAGCCAATGATCACTGACGTTTCATTGTTCACAACGTTTTCCTCTTAAAATTGGGGCGAGCAGTATAGCGCCAAAATCTATCATGAGAAGGAAAAGTATCCATTGAGGGTGAAGTGGCAGAGCCATCTTGCCGATTTTGCCATCCACACTGTGATAGTCGTAATGTTATGGCGAGTGGCTCTACAGGACAAACGTATCGTAACTTCTTTGAATTTGGTGAAATGCAGCCACTGCGAGTACCCGGAAAATTTGATTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAACTTTTAAATACAAATAGTTACAGCATGTGATTTAAAATAGGGTAAAAATGGCTTTTTTACTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : A # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 26864-27611 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWK01000043.1 Vibrio sp. V33_P6A3T137 scaffold30_size34674, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 26864 28 100.0 32 ............................ GACAGGGCTGGCGGTTGTAGCCTGTAACGCGG 26924 28 100.0 32 ............................ ATTTGGTGCAGAAAGCACTGAGTTTTCTATCA 26984 28 100.0 32 ............................ AAGCTCGAGAGCATCCGAGTCGTCATGAACAC 27044 28 100.0 32 ............................ ATCTAAATTTACCCGTTTCAAAGCCTTCAATA 27104 28 100.0 32 ............................ TGAACCACAGGAATCGTCTTCTTTGATAATTA 27164 28 100.0 32 ............................ AATCCAAACCCAATTACCGCAAATTTCAATAA 27224 28 100.0 32 ............................ TTCAAGATGCTTGTCAAAATCTTCACTTTGGC 27284 28 100.0 32 ............................ TTACAGCGTTGTACCTGCTGGTACTCGCATTC 27344 28 100.0 32 ............................ GCGAACCACCACTAGTTGCTGGCTTGATAACC 27404 28 100.0 32 ............................ CTTTCGGGCGTGATTAATGGCGATTTTCTCGC 27464 28 100.0 32 ............................ CGCCCCGCCGCAATTTCGCCAATCATGGCTTG 27524 28 100.0 32 ............................ TAGCAACTCCAGCGCCTCATCCATTCGCTTAA 27584 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCACTATGGGCTGCTAAATCGGGTCAATCGCTTGCAGAATGCTTAGCCGTACTTGAACAAAGCAAGCCGACAGCCTTGTGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGCGCTCCCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGGAGCAACAAAGCACATCGCAAGATGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCTACCGTGCCGCACTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTATTTAAAAATAAGCTTTAAATACAATAAGTTACAACGAGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : AATTGATAGAGCTGTAGATCCCCGTCATATTTTGCCTGCTATTGCTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAAGGATGCTTGAGGCTTTTAATATTCGATTATTCACCGTGATTACAAGAAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCCCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATGAATTGCATTTTTCTTATTTAGGACGCGACTCGGTGCCCATCAGTGATCGCTATGTCCTATTTCGGATGGCGCTAAAGAGTGATCCCCATGCCCGAGTCATTGGCGATGGCTTTCAAATGTTGGCGCAAACGGCGGGTACGGTGAGTCATCCGCTGGATGTGGGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 56-442 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWK01000115.1 Vibrio sp. V33_P6A3T137 scaffold88_size13634, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 56 28 100.0 32 ............................ ATGTTGCTAGTACCACTGTCGTCAAAGCACCG 116 28 100.0 32 ............................ TACCTTGTATTTCCAAGGATCTATGAGAGTGC 176 28 100.0 32 ............................ AGATTCAGTTACGCCACCTTTACTTACTGAAA 236 28 100.0 32 ............................ AGCAATCAGCGCGGGTAGCGTCATTACATGGT 296 28 100.0 32 ............................ TATCGTTACAGTTAAACATTATCACGCCACGG 356 28 100.0 32 ............................ AGCATATTTTTGGATATGAGCACGAGCTTGTT 416 27 85.7 0 .....................A.-..CG | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTGCCGCACAGGCAGCTTAGAAATCCGTTGGTGTAGATTTCGATCCTTTCAATTAG # Right flank : GGAGGCTTTTTTTGTAACTTGTCAGGTAATGCTTTCAGGTCACATTGGCTTGGTAAGGTGTTAGTAGTAACCATTATCACGAAGAGGGACTTCGAGAGTATTATCACCTTGTCGAGTTGGGGTGCCAATCATCTCATCATAAGGACTTTGATGGCGTAGCACTTGCTGCTGTGTATTCAGCTTTCTGCAACGTTTTTGCATTTCTACGATAGAGTGGGTCTTTAACAGATTATCGTTGTTATCGACTACCCAATACTCTTGGTCATCAATAATTACTGACGCTTGATAAAGCGCCATATCTAATGCGTGAATAATTAACTTATTGATATAAAAGTACTGTTCTAGCGTAGTCAGTGTTTGTCTCATGATTCCTCCTTGATTATTAACCAATACGTTGGCTTATTGAGAGGCGATCACTCAACGTTATATCCCCTTCGTACTTGAAGCTGCAGCGGTGTTGGCTAGGTTCATTCACCCCAATCACATCGTCTGTCTATGCT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //