Array 1 39443-36422 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYTZ01000016.1 Bifidobacterium pseudolongum subsp. globosum strain 102015 Contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 39442 36 100.0 36 .................................... AGCATTCTCCTGACCTGGGCGTCCCAGCACGACATC 39370 36 100.0 36 .................................... CATATCATTAACGCCACCTATATGGCGCCTAGTGTA 39298 36 100.0 36 .................................... TTCAAAATCGCCCAAGCCGTAGAGGCTGACCCATTC 39226 36 100.0 38 .................................... GTTCTGCGCGGCCTTTTTCACAATCATCGAGACCCTGC 39152 36 100.0 37 .................................... TACTCGTCGTGCGAGGTGTTGGTGGACACCCAGTCGC 39079 36 100.0 38 .................................... TGTTTGTTAGGCATCTCACGACGCTATGTGCACAAACA 39005 36 100.0 38 .................................... GGCGCAGTGAGTGGCAGCTGTACCCCTTCGGCAAGGCC 38931 36 100.0 36 .................................... TCCACGGTCACGCTCTTCATGACGCGGCCGGCCGTC 38859 36 100.0 37 .................................... CATTGCACCCTGTTTTCCTTGAATTTTTTCATGGCCG 38786 36 100.0 36 .................................... TGCACGACGCGTGTGGATTACAGCGATGGTCAGTGG 38714 36 100.0 38 .................................... GCGGCCAAACGTGGCGACACCGAGGCTGAGCAGCTGGC 38640 36 100.0 35 .................................... GGCTCATCGCACCCGACCGCAATCCACAGAAACTC 38569 36 100.0 36 .................................... CGAAGAAAAATCCCGCAAGGGATACCGCTTCTTCAA 38497 36 100.0 35 .................................... TGGAGGCGGCGAAGGCGGACGCGACGGAGAAGGCC 38426 36 100.0 36 .................................... GAGCCGAACATGGTGGCATTGTACTGGTTGCGCTGC 38354 36 100.0 37 .................................... ATCTACACGATCGGTTTCTACGACATCGACCCAGCCG 38281 36 100.0 34 .................................... TTAATGACGCCCGCGTACGGCACGCTCTTTCGTC 38211 36 100.0 35 .................................... GTGACCTCGCTGTCTGCCGGCAGGATGTTGGCCTG 38140 36 100.0 37 .................................... GCAATGGGTGCCGCTCGAACATATGTTCTCCTTTAGA 38067 36 100.0 37 .................................... CCCACTTCTGGTGCACCACCATCAAACTTCAGTTGGC 37994 36 100.0 38 .................................... CCGTATACTTCGACCCTGGCATGATTGTCGTCGGTAAT 37920 36 100.0 36 .................................... GCGCACACCGACCATGGTGCGCTGCGTATCGACCAG 37848 36 100.0 37 .................................... ATCAACAACACGGAGGTCGTGAGCACGTTGCGTATCG 37775 36 100.0 40 .................................... CGGTGATCAGTGGAACATGCGGCGTTCCGGCCAGTGGAAG 37699 36 100.0 38 .................................... ACCGACATGCTCGGCAAGAGCCGTCTGTGCCAGAAGGT 37625 36 100.0 36 .................................... TACAGCTGGGATCTGGCGACCGTTGCGGACCGTATC 37553 36 100.0 35 .................................... GGGCCAAGCGTAGCGGAACAGTGGGTGAACGCGTT 37482 36 100.0 37 .................................... CGCATCGACCACAAGCCGCCCGTGTCGTTCACACAGC 37409 36 100.0 38 .................................... ATGGTTGACGACGTTACGCTCGGCCGTGTCGAGGACGC 37335 36 100.0 37 .................................... AACTCCTACCACACCCTCGGCGGCAACGGCGCAGGCT 37262 36 100.0 39 .................................... GCGCGCCAGATGGTGCTTGAGCAATCACCGTAGCCGGTG 37187 36 100.0 37 .................................... TTGCGCCAACGTCGAGCATTCTGACCCGCTTTGGCGA 37114 36 100.0 36 .................................... TACCGTCTGCTCACCATCGCGCAGGACGGGGTGGGC 37042 36 100.0 39 .................................... AACAACGTCATACAAGGGGCGCAGAAAGACGGCATCGAA 36967 36 100.0 38 .................................... GCGGATTACCTCAACCAGACCGATGCAGCCATGGCGAA 36893 36 100.0 39 .................................... GGCGATTGCAGCTCGACCATCTGGCGAGCCTATCAGGAC 36818 36 100.0 37 .................................... TCACGCAAGGGATCGCCACCATTGGCGCGCCACGCAG 36745 36 100.0 36 .................................... AAGCCGGACGATACAACGTATACTCCCGTGTTCAGG 36673 36 100.0 35 .................................... AGGGAATCCCAGAATAAACCCACAATTGTGGGATT 36602 36 100.0 34 .................................... AGTCTCTCGTCCGCGGTGTGTGGCTCGTGGATGG 36532 36 100.0 39 .................................... ATGACGGCGGGAAAACGAGGATTTTCCTGAAATCAACAG 36457 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 42 36 100.0 37 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Left flank : ACGCACTTCAACGACGTGCGCCTGAAAAACTTCATCGAAATGCGGCACTGGGACTCACTGCCGATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAAATAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAAGTGCTGGGCGTCGGGGATGCGCTCGCCGATGTGCCGGGAGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGAGGCTATCCCGTGCGAGGACTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGGTTTGTTGAGCTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : GGCGAAACATTCGACTGACGACAAGGACGACACCATATCTCCGAAGTTTCGGCTTCGGAAACTCGCGGAAAATTAGGCATCGGACACCTGAACTTATAGTCAGTTGATCGTCTTAGAAATCTTGGCTCTGACTTTTCTTGTTTTTTTACTTTCGACATGATTCAAAGCACTCTGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCAATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //