Array 1 2426407-2425758 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_008686.1 Paracoccus denitrificans PD1222 chromosome 1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                                                                                                                                                                          	Insertion/Deletion
==========	======	======	======	================================	=========================================================================================================================================================================================	==================
   2426406	    32	  96.9	    35	C...............................	TGAAATCCTATGAAATGATGGTGCGCCGTCATGTC                                                                                                                                                      	
   2426339	    32	 100.0	    34	................................	TCGTGTCACCATCGGGCGCGATCCGCGCGCCCCA                                                                                                                                                       	
   2426273	    32	 100.0	    35	................................	CTATTCCGGGGCGTCGTCGATCCGAGCGACGGTCG                                                                                                                                                      	
   2426206	    32	 100.0	    34	................................	AGCACTCCTGCCCCAGCCAGCGCGATTGCTGCCT                                                                                                                                                       	
   2426140	    32	 100.0	    34	................................	CTGTATCCCGATGGCGGCGCGGGGTTCGTCCTAT                                                                                                                                                       	
   2426074	    32	 100.0	    34	................................	ATCTCGAACCGGCGAACATCGGGCATATCCAAGC                                                                                                                                                       	
   2426008	    32	 100.0	   185	................................	ACCGGCAAGAACGTCACCTCCGAGCCTTGCAGTTCAAAAGGGGGGCGCGGACGGCTGATCGGACGCACGAAGGGCGGGCTGAACTCGAAGCTGCAGGTGGTGGCGGACGCGAAGGGTCGTCCGATCCGGATGTTCCTGTCGGCGGGGCAGACCTCCGACTACATTGGCGCGCGGGCGCTGCTGTC	
   2425791	    32	  75.0	     0	C...AT........C.......T.C.T.C...	|                                                                                                                                                                                        	G,G [2425760,2425778]
==========	======	======	======	================================	=========================================================================================================================================================================================	==================
         8	    32	  96.5	    56	GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC	                                                                                                                                                                                         	       

# Left flank :   ATGTCCCTCGCGCTGGCGCCGGTGCTCAGCGACGGGTTGGAAGCCTTGCGCCAACCGCCGACAGGGCCGGGACTGCTCGGAGGGCTCTCCGGTTTCCTGCGCGGCCTGGCTGGCTGGGTCAATCGCCTCGCCGATACCAGCCCGCGCTGGCTGAAATGGCCGGAAACCGTGGCCTATGTGGCTCATGGGGCGAGGCAGGCCTTCGGCACGACTTACACGGCCTCGACCTTGGCCGGGGTGATCGAGGCCTCGCCGGCATGGCAGTCCTTCACCGGCGACGCGAGAGCGCGGCTGGATCAGGCACGCACGGTGCAGGCGCTGACGAATCCGCGCGTCTCTCTGCCGGACGCCCCATCCCATAGGGGCATATGACAGCATGCGCTTGTGCCAATATGCACATCCGGCGACGGAGAGCCGGCAATTGCGGCTGATACGATTTCTTGGTAATATTCGGTATCGATGCACAGGAGGCCCGCATGTCCCGCAACACATCGGTTTCG
# Right flank :  CGGGGTTATGATGCCGACTAGTTCCGCAACGCGCTGATCGAGATGGGGATTTCACCGTGTATCCCGTCCCGCATCGGTCGCAAAGCCTCGGTTCCGCACGACACCGAACTCTACCGCCTGAGCCACAGGATTGAGAACATGTTCGCACGCCTCAAGGACTGGCGCCGTATTGCAACCCGCTAAGACTGATGCCCCATTCTGTTCCTCTCCGCCTGCGCCCTGGCTGCGACCATCATATATTGGTTGTGAGCCCTGACTCTAAGCGATCAATTTTCAGGAGACCTTTTGGGTTTGGTGGATAACCATTCAGAATAGAGAGTGCGCTCGTCGCTTGTTAGCGTCGCCTCGATCTGGCAGCGCAGTTCTGAGTACCGGCGGTACTCTGCCATATCCTGAAACCTAGGAACCACATACATTGCTGGGCAGGGGAAGGGCGCAAAGCCATAATATTCTGGATCGTTGTCGCGGGCCCATTCCCATCCCGCGTCCTTGTAAAAGTC

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-7.20,-7.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.77   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//