Array 1 18212-12900 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGEJ010000002.1 Acinetobacter baumannii strain AbCTX19 AbCTX19_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 18211 30 100.0 30 .............................. GTACAAGTCGTTTAGTAACGGACCAACCTT 18151 30 93.3 30 ............................AA CACCAAGAATTACCTTCTCAGAGTTAGTCA 18091 30 96.7 30 ............................C. GAATACAAAGCAAAAAGAGACCAGGAAAAC 18031 30 93.3 30 ............................GA GCTACGGCAAGTGAGCCAATAAAATCTGTG 17971 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 17911 30 93.3 30 ............................AG TGAGTTTAAGCCCAAATGCTGTTTCAATAC 17851 30 96.7 30 .............................C TCATGAAAAAGAGGTGATCTCTAAGGAAAT 17791 30 93.3 30 ............................GC CACAGCCGAGATATTTTTCGATCGCAAAGC 17731 30 96.7 30 ............................A. CAAACGCCATGCTTCATCGATAATGCATAA 17671 30 96.7 30 .............................G ATAAATCGTATATTTCTCGTCATATGACTA 17611 30 100.0 30 .............................. GTGGGCAAACATCTATTAATAACTCTAGAT 17551 30 96.7 30 .............................A TTGAAATTTCGAAAGATCGTTTTTGGGAGT 17491 30 96.7 30 .............................G CATACAAGCAGGTTTAAAGAAGATTAAAGC 17431 30 96.7 30 ............................A. TCAGCCAGTATTCAACGGGCCGTTCATTAA 17371 30 93.3 30 ............................CA ACTCAACGCCCGACTTATGTCTTTAAATGT 17311 30 96.7 30 ............................G. TACGTGAAATTTACATCAAGTCAACTAAGA 17251 30 96.7 30 .............................A CGCCCTCTGCAATCTCATTTACCTGATTAT 17191 30 93.3 30 ............................GA AGTGAAGCAAAAAAGCTGATCTCGATTAAA 17131 30 100.0 30 .............................. ACCCTTCACATTTAGACATGTGAAAAGCCA 17071 30 100.0 30 .............................. CTCAAGAGATGGGTTGCATAATGTTCGTTA 17011 30 93.3 30 ............................AC ATACTCTAGGTTCTAATGAAAGAACCATAT 16951 30 96.7 30 ............................A. TCCCAAAAATCATTGCAACTGAGTTAAAAA 16891 30 96.7 30 ............................G. TTAGCATCCATTACATTTACAGATCGTTAT 16831 30 93.3 30 ............................GC GCAAATTGAATATTTAATTAATCTTTTTTT 16771 30 96.7 30 .............................G ACGAGTTCTCAAAAAATGAAAAAGCACTAT 16711 30 96.7 30 ............................A. TATTTATCAGTTCAATAGCTTCTTTCCGTT 16651 30 93.3 30 ............................AC ATCAAGGTTTAGTAAGGGCCAATGTTGGTG 16591 30 100.0 30 .............................. TGCAAGCGATTTTGGTGTAATCGGAAAAAC 16531 30 93.3 30 ............................AG CCATAGCAGCTTTAGCGATAATTGAACCCT 16471 30 96.7 30 .............................A ATAAAGTATTTCAGTCAGGTGCTGCGCAAG 16411 30 96.7 30 ............................G. ATGAGTCACTTCCATCTGACTATACAGATA 16351 30 96.7 30 ............................G. ATGATGCCGTAGCTTCTCAAATCATGTCTG 16291 30 96.7 30 .............................A AGGCATATGGCAAATTTGAAGAAGTTAAAA 16231 30 93.3 30 ............................AC TGAGATGTTCAAAAGATCAAAATCCTCTTT 16171 30 96.7 30 ............................G. ACGCACCGCACCCAGCTTTTTTCATAACTG 16111 30 93.3 30 ............................GC TTTTTTTTACTTCTTCTTCAACTTGTTTAA 16051 30 93.3 30 ............................AA GCACGAGACCAATCAAGCATCTTTGTTAAT 15991 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 15931 30 96.7 30 .............................G GTAAAGTCCTAGTTCATACCTGGTAGTAAC 15871 30 93.3 30 ............................CG AAAGCACCACCACAAGAAAATGAAGAAAAA 15811 30 100.0 30 .............................. GGAAAAGCCACACTCACACAATTGGGAAAT 15751 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 15691 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 15631 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 15571 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 15511 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 15451 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 15391 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 15331 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 15271 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 15211 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 15151 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 15091 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 15031 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 14971 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 14911 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 14851 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 14791 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 14731 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 14671 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 14611 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 14551 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 14491 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 14431 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 14371 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 14311 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 14251 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 14191 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 14131 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 14071 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 14011 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 13951 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 13890 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 13830 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 13770 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 13710 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 13650 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 13590 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 13530 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 13470 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 13409 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 13349 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 13289 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 13229 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 13169 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 13109 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 13049 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 12989 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12929 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 89 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCTCAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //