Array 1 65028-66366 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWOS010000006.1 Lactobacillus delbrueckii subsp. bulgaricus strain CBC-LB8 1CBC_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 65028 36 100.0 30 .................................... TTTTTCTTTTTAGACAAAACACTTTTCTTA 65094 36 100.0 30 .................................... AGCGCGTCGTCAATGCCGTTTAGGACCTTC 65160 36 100.0 30 .................................... TTCTTGGCTAAGCATTTGGCAGAGCTAACC 65226 36 100.0 30 .................................... CTACGAGCTGGAGGTAATCTAATGAGCGAT 65292 36 100.0 30 .................................... CTGGCGAAAACTCACCAAAACAACAAGAAC 65358 36 100.0 30 .................................... GCCACCTGGCAGCACCTGGCCACCGCCTTT 65424 36 100.0 30 .................................... TATCGGGGCTGGCTTAAAAAGGGGAGGCAA 65490 36 100.0 30 .................................... TTGTCTATGTGCCTGTCTTGTATGGCGATC 65556 36 100.0 30 .................................... GGTAGTCGCTGGCTGCCTGCCGGGTATCTA 65622 36 100.0 31 .................................... TTTGGCCTTGCCTTTATCTGCTTATATATTA 65689 36 100.0 30 .................................... TGAAGAAACTGAAGAAACTTCAGCCTTTGA 65755 36 100.0 30 .................................... TAGTCTTGGCATTGCGCTCCTGGTACATCT 65821 36 100.0 30 .................................... CGCCGTTCACCTGGTCAGTTGATCACCTTC 65887 36 100.0 30 .................................... AAGGATATTTAGCGCCCAGAGGATCTGGTT 65953 36 100.0 30 .................................... GTCAAGTGAACCCCTACAAGGGCCGCGCCG 66019 36 100.0 30 .................................... TTGAAACCAGCCCCAAATCCGGCCCGCCTT 66085 36 94.4 30 ..........A...............T......... AGGCAAGATCGAAAAGAACAAGGAAGACGT 66151 36 97.2 144 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGCGGGTGGGGGTGATC 66331 36 75.0 0 ....................TC..C...GAC..AAG | ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 19 36 98.2 36 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAGGACCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : GTGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGCAAGTAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGTTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCTCGGCAAATTGCTTTAAACTCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGTGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.55, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //