Array 1 44855-42818 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJTBP010000001.1 Barrientosiimonas humi strain 39T isolate 39T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 44854 28 100.0 33 ............................ GGACGCCGCCGGGCGCCCGCTGTACGCCGTGCG 44793 28 100.0 33 ............................ CTTTTCACAATCTGAGACGATTTGAAAAAACCC 44732 28 100.0 33 ............................ GTCGGCGTACGCCGACCCGTCGCGGTAGATCGT 44671 28 100.0 33 ............................ CCATGACGAATCGCCGTTGGCCGCCGTCCTTGG 44610 28 100.0 33 ............................ CGTCGTTCGAGAAGTACGCGGACTACGGCGCGT 44549 28 100.0 33 ............................ GGGCGGCACGTCCACGCTCGGGTCCGGCACCAC 44488 28 100.0 33 ............................ GACGATGCGCACCACCGCGGCCTACGACGTGGG 44427 28 100.0 33 ............................ GGACGACGTCACCGTCGAGACCAGCGACCCGAC 44366 28 100.0 33 ............................ GCCTCGATACTCGCCCGGCTCGGGCAAGTCCGG 44305 28 100.0 33 ............................ CTTCGCCCTCAGTGCCGACGGGTGGGAGCCGCC 44244 28 100.0 33 ............................ GGCCGCGCGCGGAATGGGTTGGCGCGTCTCGGA 44183 28 100.0 33 ............................ CGCACACGTCTCGGCGCCGGTCGGCACCCGCGC 44122 28 100.0 33 ............................ CCACCAGCCGCGAACGGACGCTTGATGTACGGG 44061 28 100.0 33 ............................ CGTCAGGTCGAACCCGGCGACCGGCTGCTTGCC 44000 28 100.0 33 ............................ CGCCCACGTGCGCGCGCAAGCCATCATCAGGCG 43939 28 100.0 33 ............................ CCACTCGGCGGGCGGGTGCACCGGGACAGCGGA 43878 28 100.0 33 ............................ CCCCTGCTGGAAGGCCGGCGAGTTCACTGCGTC 43817 28 100.0 33 ............................ GGTGTGCCCCGGCGACGAGCGCATCCCGCAGGT 43756 28 92.9 33 ........................AT.. CGCCGACCTGGACCAGGCTCGCGGCCGAGCCCG 43695 28 100.0 33 ............................ GGTGTGCCCCGGCGACGAGCGCATCCCGCAGGT 43634 28 92.9 33 ........................AT.. CGCCGACCTGGACCAGGCTCGCGGCCGAGCCCG 43573 28 100.0 33 ............................ GCCCCAGGTCGACGCCCTGGGTCGGGTGATGAC 43512 28 100.0 33 ............................ CCCGAACCCGCCCCCGGCGTCGGTGATCCCGGG 43451 28 100.0 34 ............................ CTCCTGTCCGCTATAGGGATTCAGCGCGTTGGAG 43389 27 89.3 33 T...-..................A.... GCCCGCGGGATGACCGACAAGGACCTGCGGTAG 43329 27 89.3 34 T...-..................C.... GGGCGGGCACGTCCGGCTCGTGCCGCTGCCGGAG 43268 27 89.3 34 T...-..................C.... CTCGCTGGTGTTCGAGTTCGCGCGGCTCGTCGTG 43207 27 82.1 31 T...-.................A..C.A CGTGGGCGGCTACGACTGGTGGCCGCTGAAG C [43186] 43148 27 85.7 34 T...A...-..............A.... CCTGCCGCGACCCGATCTGCCATGCCGGATCTTG 43087 27 82.1 34 T...-......A.G.........A.... GTACGTCGCGCCGAGCAGCGGCGGCTGGTCCGAG 43026 26 82.1 33 T...A...-............-.A.... CACCAACACCTGGATCGGCGGCAGCGTCGAGGG 42967 27 78.6 33 T...-.......C..C.......A...C CAACGGCATGAGCCAGCTCTGGCCGGCGACGCC T [42951] 42906 28 82.1 33 ..GC........C...T......C.... GGCGGGCCCGGGCACCGACGGCGTGGCAGCCCT 42845 28 78.6 0 .C.A...T....C.T........C.... | ========== ====== ====== ====== ============================ ================================== ================== 34 28 94.9 33 GTCTGCCCCGCGGTCGCGGGGGTGGAGG # Left flank : GGACGACGTGCTTGCGGTGCCAGTTCTCGTGACGCAGAACCATCGAGGGCTGGAGACCCATGGCCTGCGTGAGGTCTTGGTTCGGGGGCAGGGGCCCGAGGCGGTGCGCCTGGTGCGGGAGGGACACGTCAGCGTCACGGCTCCGCGGCGAGACAACCTCAACTCAGTGCGGAAGCTGGTGCTCCAGCGCGTGCTGGGCCGGTCTGCTGCCTGGACCACGCAGGTTCCGGTGCCGGCCGAGCCTGGGCGCCTCCTGGATGAGTGTCAGCGTCTGGCCGCGCAGCACGGGGCAGAGCTTCAGGAAGTCACTGTGCACGACGTGGCCAGGGACATGCGCGCGCCGCGGGTGGAGTTCCACCCCGGCCTCACTCACGTCTCCTTGCTCCTTGATCGGGAGGTCGCTGGCCCGCTTCAACTAGGTCCGTTTGGGCTGGAACCCGTGGGCGCGCGAACTGAATGAGAATGCGCCATCAGTCGCGCGTCGTTGCAGGTCAGGAAGT # Right flank : GTGCCGTCCGTTTGAGTCAGCGCGATAGGGCTAGCTCACCCCGCACTCCGTGGTCGAGGTTCGTCCGGCCACGCCGGGTCGATCACTGCCGCGTTCACCGCGCGTTCTACAGAGTCCCGGGGCGGGGCTGCTGGTGCGGGCCGTACGGATAGCCCGGGTCCTCCGGGAAGGCGCCGTTGACGTCCCAGGTCAGCTGGTACGCCGGCACCGAGAACTCCGGCGGCCGCTGGTAGAACCGGTTCGCGCTGAGCAGCATCTCTCCCGGGTTGGGGAACTCCTCGACGCGCGCTCGACCGCAGCCGTCGCCGAACTTGAGGATCTCGCCCGGCATCATGATCTTGCCCGCCTTGACCTCGGCGAAGCACCAGTTGAGCATCCCGCCGGCCGATTGCGGGGCCAGGCCGAACACGATCAGCTCCGGGTGCCCGAGGCCGAAGAACCCCGTCGAGTAGCAGAAGCTCGCCGATCTCGTCTCCGGCTCTGCGCAGACGTACTGCAAG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCCCCGCGGTCGCGGGGGTGGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [40-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 3571830-3566649 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJTBP010000001.1 Barrientosiimonas humi strain 39T isolate 39T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================== ================== 3571829 28 67.9 94 .C..C.G.A......TAC..C...C... AGGGCTGGAGCTCGGCGAGCAAGTACCGCCGCGCGGCGCGACGAAAGTGAAGTAGTTTCGCCCTGGAGGAGTGGAACACTGCAGGTCAGCGACT 3571707 28 100.0 33 ............................ CGGCATGACCCTCCTCGTCGCCCTGCTCATGGT 3571646 28 100.0 33 ............................ CCACAGCCGCCCACGACTGCGCCCCGTCTCGCT 3571585 28 100.0 33 ............................ CACCAAGTCGTGGGCGGTGCGCAACCCGGTCAT 3571524 28 100.0 33 ............................ CCAGCCGAACAGGGTGGTCGCGTTCCCGGCGTC 3571463 28 100.0 33 ............................ CTCCTGCCATGCGAGGTCACGGTCCACGCCGCG 3571402 28 100.0 33 ............................ CTCGATCAGGTAGGCGATCATGTTGTCCTGGAA 3571341 28 100.0 33 ............................ GCTCCGCGCCGAGGTCGCCCGACTCAAGGGCGG 3571280 28 100.0 33 ............................ CCCCTGAGCACCCGGACACCTTGGAGGAGGGCG 3571219 28 100.0 33 ............................ CCGCCTGCTGAACTTCCGTCCATGCCGGCTTCA 3571158 28 100.0 33 ............................ GTTCTGCCTCGCGGTCGCCGCCGCCGAGCACGA 3571097 28 100.0 33 ............................ CGACTACCCCGAGGACCATCGAGACGACTGCCA 3571036 28 100.0 33 ............................ CGCCGTGTCCACCGCCGCCCGCGGCATCCAGGC 3570975 28 100.0 33 ............................ GGGCGGAGCAGGACGGCCTGCACGCCGAGACGT 3570914 28 100.0 33 ............................ GCGGTCGGTCATCCTGGCGGACCCGGTGTTTGA 3570853 28 100.0 33 ............................ GACCTCGTGGCGCGACGACCTGCGAGCCGGGTT 3570792 28 100.0 33 ............................ CAGGATGTTCGCGGCGCGCACGGCGTCGGAGCC 3570731 28 100.0 33 ............................ CTCGTCCAGCCCGGACAGTGAGCCGATGCGGTC 3570670 28 100.0 33 ............................ CGCCCAGCAGTGGGCCGAGACCAACCGGGGCGC 3570609 28 100.0 33 ............................ CCGCTGGACGTGGCGGTGAGCGCAAGGGTGCCG 3570548 28 100.0 33 ............................ CGAGCCGCCGGGTTCGCCACGAAGTGGTACGAG 3570487 28 100.0 33 ............................ CGTGGTCTCGAGGTCGCCGGGCGGTGAGCAGAC 3570426 28 100.0 33 ............................ CTTCTTCCCCGCGTCGCCGCCGGCGTCGCCGAG 3570365 28 100.0 33 ............................ GGAGTTCCAGCGCCGGTCCAGCCTCACCAGTGA 3570304 28 100.0 33 ............................ CTGGGGTCGAGGCGCTATGCAGGTGTGGGGCGA 3570243 28 100.0 33 ............................ TGTATATGCCGCGCTATGGTCGCCTAGACCACA 3570182 28 100.0 33 ............................ ATGACGGGCACCGACATTAGCGCCGGTCCGCGC 3570121 28 100.0 33 ............................ GCCGACCTGCCCGATCTGTGACGGTGACGGAAT 3570060 28 100.0 33 ............................ CGACTGACTAGGTCGCCTTAGTGCGGCATATAC 3569999 28 100.0 33 ............................ CTCTACGCCTACGCTCCTGCCGACGCCTACCGG 3569938 28 100.0 33 ............................ GGAGTTCCAGCGGCGGTCTGGCCTCACCAGTGA 3569877 28 100.0 33 ............................ CAGGACGGCCTCGCCGCGCAGACGTGGACCGCC 3569816 28 100.0 33 ............................ GCGTGCTCGGTCGCGGGGAGAGAGACCGCCGAC 3569755 28 100.0 33 ............................ GCCGCGGGTGATGATGTCGAACGCGGTCTTCGC 3569694 28 100.0 33 ............................ GCTCGCCGAGACCGGCGAGGAGACCTGGAACGC 3569633 28 100.0 33 ............................ GCCACGACGCGGGCGGCGATGGTGTCGGTAGTG 3569572 28 100.0 33 ............................ CCTGCTGCGACCCGTCTCCGGCGTCGGCGTCCT 3569511 28 100.0 33 ............................ CGATGCAAAGTGACCGCGGGCGTTGACCGAGAA 3569450 28 100.0 33 ............................ TCCCCTTTCAGGGCAGTGGTGTTCAACCCCAGG 3569389 28 100.0 33 ............................ CCTACGTGCGGCACGGGCAGTAATGCCCGTGCC 3569328 28 100.0 33 ............................ GGCCGCGATCCCGCGTGGGCAATCGAGCGTGTG 3569267 28 100.0 33 ............................ GTGGCCGCCGAAATGACCGGCACGGACATTAGC 3569206 28 100.0 33 ............................ CTTGAAACCTCCACAGTGACCGCGCACGACAGG 3569145 28 100.0 33 ............................ AGCGCGGCGGCAGATGGGGCAGGGAATGTTGCG 3569084 28 100.0 33 ............................ AGCGCGGCGGCAGATGGGGCAGGGAATGTTGCG 3569023 28 100.0 33 ............................ GGTCACGGTCGATGCCGCGCTTGCGGGTGGCGA 3568962 28 100.0 33 ............................ TCGTCAATATCGGTGCTTTGTCTGCGACGAGAC 3568901 28 100.0 33 ............................ CCTCCCCGGCCGATCCATTTCACATTCTGAGAC 3568840 28 100.0 33 ............................ GCGGACGAAGCAGGCGGAATGCACCGATATGCA 3568779 28 100.0 33 ............................ GGAATCGGCGGGATTGTGGTCTAGGTGACCATA 3568718 28 100.0 33 ............................ CTTCGACGCCCAGCCCTTGCCGGCGTCGCTGCC 3568657 28 100.0 33 ............................ CAACCCCGCGTTCCACATGAAGGGCTCGGACCA 3568596 28 100.0 33 ............................ GGCGGTCGACACCGCACGGAGCCGATCCCTCAC 3568535 28 100.0 33 ............................ CTGGGGCAGGGGCGCAATGCAAGTTTGGGGGGA 3568474 28 100.0 33 ............................ CGGACACGAACTCTACGCGTACACGCCAGGCGA 3568413 28 100.0 33 ............................ CACGTCCTTCGCCGTCTCGAAGACCGTGGTCGT 3568352 28 100.0 33 ............................ CGCCGAGCAGGTCGCCGCGGTCCTGACCTCGGT 3568291 28 100.0 33 ............................ CGCTTGCAGACGAGACGTCTGGCCGGTGCCTCC 3568230 28 100.0 33 ............................ CGTCGCGACCGACGACCACGGCCCGTACGGCTG 3568169 28 100.0 33 ............................ CAGCTTGTACTCCTCGCCCTGACCCCAGTCTTC 3568108 28 100.0 33 ............................ CTCAGTCATCGGTCTCTCCTGTGTCGGTGTCGG 3568047 28 100.0 33 ............................ CAGCCCCGCGCCGGGGCCGGCCTGCTGTAGGTG 3567986 28 100.0 33 ............................ CCACACCAGCGGACTGACGCCGAGCGCGTCGGC 3567925 28 100.0 33 ............................ CTCCTGCCCGCTATAGGGATTGAGCGCGTTGGA 3567864 28 100.0 33 ............................ GATCCAGCGCATCGTCAACAACGCCACGAGCCC 3567803 28 100.0 33 ............................ CGAAGACGAGTGGCCGTGGCGGGTGGCAGTCCC 3567742 28 100.0 33 ............................ GACGAAGCCGCCGGTGCCGACGATCCCGACGGG 3567681 28 100.0 33 ............................ GGCCTACCTCGACCTCAACGGCGGCCGGCCGCG 3567620 28 71.4 14 .............TCA.T.T.G.CG... GAGCTCGAGGTGGC Deletion [3567579] 3567578 28 100.0 33 ............................ CAGCCTCCTCGACCGCGCCGGGGTGTCCCGGAA 3567517 28 100.0 33 ............................ GACGAAGCCGCCGGTGCCGACGATCCCGACGGG 3567456 28 100.0 33 ............................ GGCCTACCTCGACCTCAACGGCGGCCGGCCGCG 3567395 28 71.4 14 .............TCA.T.T.G.CG... GAGCTCGAGGTGGC Deletion [3567354] 3567353 28 100.0 33 ............................ CAGCCTCCTCGACCGCGCCGGGGTGTCCCGGAA 3567292 28 100.0 33 ............................ GTGCCTGCCGCCGACGTGGCGCGCGTGGCACTC 3567231 28 100.0 33 ............................ GGCCGCGCGCGGAATGGGTTGGCGCGTCTCGGA 3567170 28 100.0 33 ............................ GGCCGCGCGCGGAATGGGTTGGCGCGTCTCGGA 3567109 28 100.0 33 ............................ CACCGGCCTGTCGTCGTCGTCGGTGAGCGAGTC 3567048 28 96.4 33 ...................A........ CTCCCACCACATGAGCCGCGGCGCTCCTGGGGT 3566987 28 100.0 33 ............................ GCTCAGCGACCCGCCGGCGGCCGACTCGATCGA 3566926 28 100.0 33 ............................ GGACGGCTCGTCGACCGCGGCCGGGACCGGGCT 3566865 28 100.0 34 ............................ GACTACGTCCTCTCAGAGTTTGTCAGGAAATTCA 3566803 28 100.0 33 ............................ CAGTTAGGACCATAGGCGAGTAGGTGCGGCGTG 3566742 28 96.4 37 ........T................... GAACGACGTACGACGGGCCCAGATGCGGGAGGTGGCC 3566677 28 71.4 0 .A.....A.........T.A.GC.G..G | A [3566663] ========== ====== ====== ====== ============================ ============================================================================================== ================== 85 28 98.5 33 GTCCGCCCCGCGCGAGCGGGGATGAGCC # Left flank : GCTCGCGCCGAGGAGCTGGACGATCTGCCCGCCGAGACACGTCGCGAGATGCGCGACCGACTGCACGACGGGAAGCTGCTCACTCGGTGCGTGCGAGACATCCACCGTTTGCTGCTGGACACCGACGACAGCCCCGACGAGGTCGATGACGGCGAGTGGGATGTCGTGCATCTCTGGGACGGCCAGGGGCGGCGCGTGGCGGGTGGACGCGACTACGCGGAGGACGTGCCGTGGTAGTTCTCGTGCTCACCGCCTGCCCCGCTGGACTCCGCGGTCATCTGACCCGGTGGCTGATGGAGATCTCCCCAGGCGTCTTCGTCGGTGCCGTGCCGGCTCGGGTGCGGGAACAGCTGTGGGAGCGGGTCCTTGATCTGTCGAAGGATGGCCGCGCGGTGATGGTGCACTCCGTGCGCGGCGAACAGCGGCTCGCGTTCCGGATCCACCGGCACGAATGGGAGCCGGTGGACTTCGACGGGATCGAGCTGATTCGCCGCCCGACC # Right flank : CCCGTCACGCCACCAAACCGTCGCGCTGACAAGGCAGTTCGCGCCACCTGTGCCCGGCACTCCGCCTCACCAGCCGGACCGATCGACGAACTGCCTTCCCGCAGCGACGGTGTCCGGGGCAGTGGGACAGCCCAGAAGCTGCCGCGCCGGACCTGGCGCGGAAAGGTCTGCTGGGAGCTGCTCAGCCACGCCCATCGCCGCCAGGCTCCCGGCGTACTTCGCACGGGCGAGCAGATCCTGCGGCAGCGGCGCTCCTCGTGAGGGGAGTCTGGGAACGCGTGACCCCGACCGTGTCCGAACAGATCGGACAGCGCGTCGAGTGGTCACTCGTTGCTGGTGTGAACTGCGGCGCACCCGCCACAAGTGACCACTCGGCGACGCGCTCGTTCCTCGCGGCGCTCCTTCCCCGAACTACTCGCCCCGGCGGCTCGGCTGCCCCCTCGTCAGCCGAGCCGCGGGGTCAGCGCACCCGTCTGCGCTCGCGACCCTCCCCGGGGTCC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [27-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //