Array 1 65152-64025 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKBU010000005.1 Escherichia coli strain CAP37 contig00005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 65151 29 100.0 32 ............................. TTGCCTGCCGCATGTTGATCGCCGCTGCTGTA 65090 29 100.0 32 ............................. TTGAACGATTTTGACCTGCGCCGTTTTGAGTC 65029 29 100.0 32 ............................. CTGACGCAACGATTGACCGTGCCGCCGGGTTG 64968 29 100.0 32 ............................. CCGCCGTTATATGGAGCGATTCCGGTTTGGTA 64907 29 100.0 32 ............................. TATTCCCCCAGTCACCCCCGCCACCAAAATCA 64846 29 100.0 32 ............................. ATTTTTCAGACTCATCAAAATAATCCTTTAAT 64785 29 100.0 32 ............................. CGAATTTTGCACACTACGTCGCTGAGGGTAAA 64724 29 100.0 32 ............................. CATTGCCTTTGCAGCGTCTTTCCGATCATTCA 64663 29 100.0 32 ............................. AACGTGAGATACGCCTCCCAGCGGCGCTCGGT 64602 29 100.0 32 ............................. CCGTCAAACAGTATCACCGCGTTAACGCCCGC 64541 29 100.0 32 ............................. CCACACACGTCGAGCTGGTGGGGGTTAATGCT 64480 29 100.0 32 ............................. ACACCTCTACTGACGTTCCTGAACAAGAAGAT 64419 29 100.0 32 ............................. CTCTGTCGTTTTCATATTACCGGCCTGCCACT 64358 29 100.0 32 ............................. GCCAGGAATGCAGCATTTTGCATGGGAAATGA 64297 29 100.0 32 ............................. CCGATATTTTCCTGACGTCGAAAAAAGAGGAC 64236 29 100.0 32 ............................. CTGGGCGAGGGAGAAACGCCAGCGGAGCAGTA 64175 29 100.0 32 ............................. GGATCACAAGGGCGGCTATCAGGGTGGACGGA 64114 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 64053 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.8 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //