Array 1 4372615-4374510 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009928.1 Chryseobacterium gallinarum strain DSM 27622 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 4372615 47 97.9 30 .............C................................. CAGAATAAGACGAAGGATCTGCAATACCTT 4372692 47 97.9 30 ......................C........................ GTAAAAATTGATTTCCGGTATATGCAACCT 4372769 47 100.0 30 ............................................... TTCATCCTGTACCAACTTCGCGTGGCGCTC 4372846 47 100.0 30 ............................................... AATTCCGCCCAATTTGTCAATTCATCGTCA 4372923 47 100.0 30 ............................................... TTGATGCAGTTTGTGGACCCGAAGCATGTT 4373000 47 100.0 30 ............................................... TGTTACTTTGATTTGACTTTGTAAATGTAA 4373077 47 100.0 30 ............................................... ATCCCGGAAGATTATAGATTGCAGCGTCCA 4373154 47 100.0 30 ............................................... AGGCATATATAGAATTCGAGTAATCTAATG 4373231 47 100.0 30 ............................................... GGAACGGGTGAACCACTCCATATTTTCGTG 4373308 47 100.0 30 ............................................... TTTCTAACTCGTCAATACATTGTTCTGCGT 4373385 47 100.0 30 ............................................... TTTCTAACTCGTCAATACATTGTTCTGCGT 4373462 47 100.0 30 ............................................... GAGTTTCTTGTTGTGCTGCTATTTCTTCCT 4373539 47 100.0 30 ............................................... TGAAACGGCATTCATAAGATACGAGGTTGA 4373616 47 100.0 30 ............................................... GATCGATTTCTGAAGGATGAACCTATTGAA 4373693 47 100.0 30 ............................................... GTATTCCTCATATTTCTGAGTCTCTGGCCA 4373770 47 100.0 30 ............................................... ATATATAGATAAATCATATTCATCATCACT 4373847 47 100.0 30 ............................................... CCTCTCCTTGTGTGAGACGCTCAAATCACA 4373924 47 100.0 31 ............................................... TCCATAGTCTCCAGAATCAATTGTTTCCTTG 4374002 47 100.0 30 ............................................... CATTGGCACTTGATATAATTTCTTGATAAT 4374079 47 100.0 30 ............................................... TAAGTGAATCAATGGTTATACCACTATCAT 4374156 47 100.0 30 ............................................... GCTCCCTGGGTTAATAATGCATATTAGATC 4374233 47 100.0 30 ............................................... TTTTCCAGACTTTCAAACAATCCATTTACT 4374310 47 100.0 30 ............................................... GAATATCCTGATCAAACCTTTGATCTTGGC 4374387 47 100.0 30 ............................................... ATGGAGTATTAATCCCATTTTTATTTAAAA 4374464 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 25 47 99.8 30 GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Left flank : GATGTTAATATTTTCACGAATCTTACGAGAGGACAACATATCTTCTATGTAAAAGATCAATACAACTGCGTTCCCGTAGCAGCAGAAATTACAGTTCCTAACCTGATAAATGCCATTACTCCAAACGAAGATGGTAAAAATGATAATATTGATTATTCAGCCCTGGCTTACAAGAGAAACCTTATTTTTGAAGTTTATGACCGGTATGGAAATAAGCTTTATGAGGCCGGTAAAATAAGAAACTTCAAATGGGACGGCACCGCATTTGGCAAGAAGCTTCCTACTGCCACCTATTGGTACACAATCTCATGGAATGAAAATAACAATGCCAACACCTCAGTCAGGTACAACGGCTGGGTACTTGTTAAAAACAGAGAATAATTCGAATGTATCAGCAAGAGTTAAGTCCCTTGCTTTGAGCTAGGGACTTTATTGGGTTGAAATTCACTAACTTTGTGATTAACCACAACACAGAAAATACTATGAATATTGACAGAGTT # Right flank : CCTCAAAATCTAATCCGTTGAATTTCAACGGATTTATTATTTATTTAGGATTTAAAAATTAGAATAATTCAAGCTGTTGAAACGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAAAAGATTTCAATATCTGCAAACTGCTTATCTGTAATACACATAATAGCGACTTTTCCAGCTTTAGGAAGCATATTTTTTACTCTTTTAATATGAACCTCAGCATTTTCACGGCTTGGGCAATGTCTTACATACATTGAAAACTGAAAAAGTGTAAACCCATCATCCAGCAAGCGTTTTCTGAACAAATTGGCATCCCGCATATTTGCTTTGGTCTCAGTCGGCAAATCATATAAAACCAATACCCACATAATACGGTATGCATTAAACCTTTCGGCGTTCATAGTAATTCAGGATAAGAGATCAAACGTTTTTCTCCTGTATAACATTTATAAAGGGAAGAAGCGGTCATTTTTACGGCAATAAGAAGCGGCCTTGTTTTTCCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAGTGCTTTCAAAATTTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //