Array 1 371852-370601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSW010000002.1 Streptomyces olivaceus strain FXJ2.417 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 371851 29 100.0 32 ............................. TTGGATCACAACTGTGAGTTTCACTTGTAGTT 371790 29 100.0 32 ............................. GGACGGCCCCCGGGGGGCGAGGAAGGGAGAAG 371729 29 100.0 32 ............................. GTCACCAGAGAGGACCTGGCCAGGCGCATCCT 371668 29 100.0 32 ............................. CCGGCGCCGGATCTCTGTCCGCACTGCGGGAG 371607 29 100.0 32 ............................. AGGTCTGGAGTGACGGACGCAGGCCCTTGGTG 371546 29 100.0 32 ............................. TGATCGCGCGGGTGCGGAGTGAGGGTGATCCA 371485 29 100.0 32 ............................. CACGTGCCCTTGGAGTTCCACGTCCCCCTGGT 371424 29 100.0 32 ............................. GGGGGCTACGCATGATCGCCCGCCTCCTCTGC 371363 29 100.0 32 ............................. GCGGTCCAACCCCCCTCGCAACATGGCGGTGC 371302 29 100.0 33 ............................. CCCCCCTCGCTCCCTCGCACGCGAGGGAGCGAG 371240 29 100.0 32 ............................. TGCATGCCATTCACGCGGACGTTGACGCTCGC 371179 29 100.0 32 ............................. GAAGCGGTCCGGCTATCCCAAGAACTCATCAA 371118 29 100.0 33 ............................. TGCATAGGGGACGTCCTCCGGCTGAGGGGGGGG 371056 29 100.0 32 ............................. GCGAGCGGGGTCGAGGACCAGGCCGCCCTGGT 370995 29 100.0 32 ............................. GAGCGAGAGGGCCGGGGGTTCCCGCCCCCGAC 370934 29 100.0 32 ............................. GTCCGCTGAGGAGCCGATGCGGACCCAGACCG 370873 29 100.0 32 ............................. GCCCCGGAGAAGACGCGGGACAGCGTGTACCT 370812 29 100.0 32 ............................. ACCCAGTAGCCGCGGTTCCGGGACTGCGGTAC 370751 29 100.0 32 ............................. GAACGCGAGCGGATCGCCGCGGCGATCGCCGG 370690 29 100.0 32 ............................. CCGAGCAAGAAGGACCGGGCCTGGCTCCACGA 370629 29 89.7 0 .............C...A..........T | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.5 32 CTGCTCCCCGCACACGCGGGGATGGTCCC # Left flank : CGGCATCAACCACGACGGCCCCGAGGACTACGGAGACGAACTCTGGTGACCGTCATCGTCCTCACCAACTGCCCAGCCGGACTACGCGGTTTCCTCACCCGCTGGCTACTGGAGATCTCCGCCGGCGTCTTCGTCGGCAACCCCTCCGCCCGGGTCCGCGACGCCCTCTGGCAAGAGGTCCAGCAGTACGCAGACCAAGGCCGCGCCCTACTCGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCATCACCCTCATCCACCGCCCCGACCCAAACGCGCCGCCCCCCGGGCAAGCCCCAGCAGGCGGACCACGCCCCGGCTGGAGCAGAGCCGGCAGACGCCGCCGCTTCGGAAGAGGCTAAAGCACACCATGCAAGATATGCACGATTTGCCGGAATCAACGAAAGTACTCGAAAACCGCTCCCTGCGCCCATAAACCCGCAGGTCACCCAGT # Right flank : GCCCCTGTTCTGCGCCCTCACATACCTGTTGCGCGACACGCAAGTTCATCGAGGCAGGGCCCCACCCCCGGCCCGAGGGCTGGTCCACTCGCACCACACCACCTTGCCCGGCGACCGTTCCGCCACTCCCCATTTGTCGGCCAGCTCCGACACCAGCAGCAGCCCGCGCCCGCTCTCGTCCGACCGGTCGGGGGCCTGAGGTACGGCCGGTACCCCGTCCCCGCTGTCGTGGACCTCGACGCGCACACCGTCCCCGCAGGGGAGCAGCCGCAGCAGAAAGCCCCTGCCAGGTGGTGCGCCGTGCACCAGGGCGTTGGTCGCCAGTTCACTGACGCACAGCGCCACGTCGTCCGCGCGCTCACGCACACCCCAGTCGGCGAGCACCTCGTGCGCGAACGCCCGCGCAGCTGGGACGGACCGGCGCTCTCGGCGGTAGAAGCGCTCACGTGGGGAGAGGGGTGGAGTTTCGTTGTTCACGTGACGAGGGTCACGCTCCGTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 382303-383810 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSW010000002.1 Streptomyces olivaceus strain FXJ2.417 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 382303 29 100.0 32 ............................. TCCGCGATCTGGCACAGTTCGTCGAGGACCAC 382364 29 100.0 32 ............................. GCTGAACTTCCTTTCCGTTCTGCGCTCCATCA 382425 29 100.0 32 ............................. AGCTCGCGCGCCTGGCCTCGATCTACGACCCG 382486 29 100.0 35 ............................. GGCGCGGCGGCGTTCCGCACGTCGGTGGCGTGCGG 382550 29 100.0 33 ............................. GGGCTGGGCGCCGCGAGCCTGCTGGAGTTGCAG 382612 29 100.0 32 ............................. GTCAGCAGCTGCTGGGAGATCGCTGCGTTGAG 382673 29 100.0 32 ............................. GAGGCGCAGGCGCGGACGAGCGCGGCCCGGTC 382734 29 100.0 32 ............................. AGAACGTTGATCAACAGTCGCGAAACGTTCAA 382795 29 100.0 32 ............................. GACGTCGCGGGCGCGCAGCTCGTCGCCGTCGA 382856 29 100.0 32 ............................. CGGTACAGGGTCGCGGAGGACAGGTATTGGGT 382917 29 100.0 32 ............................. ACCGCGCACCTGCCCGGCGCCGACCCGATCCC 382978 29 100.0 32 ............................. GCCTTCTCTGCGAGGGTGGCGAGGCCGCCGCG 383039 29 100.0 32 ............................. AACGACCGCGCGGACGCCCTCCAGCGCCGCGC 383100 29 100.0 33 ............................. CGCGGCCGGACAGCAGCAGAGCGGGCAGCCGTC 383162 29 100.0 32 ............................. ACCCCCGAGTTCCGGGGCACCGCCGTGTGCGA 383223 29 100.0 32 ............................. CCTGTCTACTACGCCCGGTGGGTGGAGTACGG 383284 29 100.0 32 ............................. GCCGCCCTCACCCTGGTGCGACGCGGTGAAGC 383345 29 93.1 32 ..G.........................G GTGAAGACGAACGTCACGTCGCCGGCGTCCGC 383406 29 96.6 32 ..G.......................... AAGGCGGACGTCTACGCCGCGACAAAGGGGAG 383467 29 93.1 32 ..G........G................. GACCCGCAGACGGCCTCCCTGCTCCACCACGA 383528 29 89.7 41 ..G................A.....T... GGGCCGTCGGCGGCGAACGTGACGTTCGCGGCGTTCGCGAC 383598 29 93.1 32 ..G......................T... GGCTACGACGGATGGCTGATCGACGCCACCGG 383659 29 93.1 31 ..G........G................. GCAGCAAGGGCGACAAGGACCCGGCCGAATG G,T [383676,383685] 383721 29 79.3 32 ..G....T...G...C........CT... AACACCCCGAACCCGACGGGCGGCGTGCAGGT 383782 29 82.8 0 ..G...............T...G.TT... | ========== ====== ====== ====== ============================= ========================================= ================== 25 29 96.8 33 CTCCTCCCCGCACCCGCGGGGATGGCCCC # Left flank : TGGCACGCGAACGCCGGGGTGGCCTTGCCGATGTCGTGCACCCCGGCGAGCCACACGGCGAGGGCACGGGCATCCGGCTCTCCGCCGGGCAGCGCCTCGGACACCAGCTTCCGCACGCTTGCGGGCAGCCACTGGTCCCACAGCAGTCCGGCCACTGCGGCACTGTCCTCCATGTGCCGCCACAGTGGCAGCCAACCATCGCTCTCACGATCATGCTTCGCCCACACCGACCGTGCCGGCTCCCCAAGCCGACGCAGCAGGGCGGAACGGGCGTTCCCCCCATTACTCATGGGTGATTGATACAGGGAAAACCCGGCTAGCCATGCCAAAACGAAGAAACTGAAGAATCGGTCCAGGGTCAGCTCTCCCAAGACATACGATGAGCGGCTGACCCTGGAGACGTTACGATCGCGAGCATCACCCGAACGCCCTATTTGCCGGAATCTGCAAAAGTCTTGGAAAACGCGCTCCCGCGCCCATAAACCCACAGGTCAAACAGT # Right flank : CGTGATCGCCGCTCGGGTGTGGCGGCGCTTGGTCGGCCCTGGCCCTGTGGCATGGCGCAGTGGAACCCGTCTCGTCGTTGATCTCTACTCTTGTTCAACTCAAGCGGTATTCGTCGGAGTATACTCTTCGTGTGGATACGACGATCAAGATCGATTCAGAGACCCGTGACAAACTGGCGGCTCTGGCTGACGCCAGGAACATGTCGATGCGAGCATTGATCGAGGAGTTCGCTGCAACCGCGTTGACTCCTGCGCAGTTGCGTGAGCGGGCCGAGCGTACGGACGCTTTCCTGGCCGAGGAATTCGGGCACCAGGTCAGCGAGGACGAGGCCGGAGCGCTGCGCGAACGGATGCGTCAGGCCCAGAGTGCAGGTCCGGCCCGGGGCACGGCCGCGTGATCGTCGAGCACTACATCCTGGACAGCCCCACGCTCCTCGCCATGGGAGGCAGTAAGCAGGTCTCCGGGCTCATCCATATCGCTGCAGGGGATCCCACGGTGC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTCCCCGCACCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 384742-385140 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSW010000002.1 Streptomyces olivaceus strain FXJ2.417 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 384742 29 100.0 32 ............................. GGGGAGACCGACGAGTCGGGGGTGCTGGTGGA 384803 29 100.0 32 ............................. TGGACGGGATCCTTTGCATAGCCGCGGATCTT 384864 29 100.0 32 ............................. GCCACTACTCCGGGTCTTCTGGTCGGTCACAT 384925 29 100.0 32 ............................. CGGCTCGAGGACGCGGTCGCCGCGAAGTGGCA 384986 29 100.0 32 ............................. GCCCACGGCCCCGACCCCATGGGCCGCTGCGA 385047 29 82.8 37 ...............A.........GATG GTTCCTGGACCACACGCCTGCCGATGAAACCGCTGTC 385113 28 75.9 0 .......T....T........C.-A..GT | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 94.1 33 CTGCTCCCCGCACCCGCGGGGATGGCCCC # Left flank : CCTCGCCATGGGAGGCAGTAAGCAGGTCTCCGGGCTCATCCATATCGCTGCAGGGGATCCCACGGTGCGTTTGTGGGTTCCCATCGTGTGTGTGCTGGAGGCTGAGCGTGAACGGGCCGGTCTCGTGGACTACTTGGGCATCCTCGACGTCTTGCATACCCTGGACGCCGACTATGCGATGGCGCACAGGATTGCTGACCTGTATCGCCGGAATGTTCCCTTCGGTGTGGGGGCTGCCGTGCACGCCGCCCAGCCCACGTTGGACCGTCCTGACGGTGCTCTTGTCGCGACGGTTGCGCCCGCCGACTACGACGGCCTCGGAGCTCCGGTCATGGATCTCAATCGGTAGCCGAACACCTGGTACGGCCGATGCGCGAGCTTCCTCCGGCTGGGCTGTCCGGTAGTAGTCTCGATGCATTGAGGGAATGGCCCTTTTGTCGGAATCTGTAAAAGTCCCCGAGAGTGCGTCGCCGCGTCCATGCGGCCGCAGGTCAATCAGT # Right flank : TTCCGACCGAGCCGCCCGGAATGACTTCTACAACCGCTCCGACAACATGGGACCCATGTCGGGAAGCGAGAACTCTCGTGGCGGTGCGGTCATGGACGCCACCTACCGCCAGGATGTCCACCCCTCCCTCTACTCGTGCAGCTAGGGTCCTGTCCCGAAGTGCAGGAGCCACCTCATGAACCCTGGATCCGTCCTGTCCGCCCTGCCCGGCGCCGCTTCCGTTTCCGGTCTGGCTTCCGCGTGGCGGTGGTCGCCGAACCCGATGTTCACGTTCACCGCTGCGCTCTCCACCGACGGTCGGCACAACCTGCAGGTCAACGTACGCGGCCCCTACGGCGAGGGCTTCGTCACAGCACTGCTCGCCCACGCGCGCGCCCATGGTGGCACGTTCGTAGAGCAGAGGCGGCCTCTGGTGGCCGTCGGCGGCTTCCAGTACGACGGGGCGGCGTTCGACACGGTGGGGGTAGCGGCGCCCGAGGTGCACGGCTACCACGCCGCGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 386198-387265 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSW010000002.1 Streptomyces olivaceus strain FXJ2.417 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 386198 29 100.0 32 ............................. TCTCCCGTGCCCACCCACTCTCCCCAGCCAGC 386259 29 100.0 32 ............................. TGGTCCCTCACTTCCACGGGAATAGCGTTCAC 386320 29 100.0 32 ............................. CTGGCGCGGGCCATAGACCGGCACCGCGACGA 386381 29 100.0 32 ............................. GAAGCGGGCTCCCTCCCGCAAGAGCGGGAGGG 386442 29 100.0 32 ............................. TGCTGTGCCATGCGGCGCCGGGAGGACGTGTC 386503 29 100.0 32 ............................. GGCCCGCCAACCGGCGGAGAGCATGCAGCTGC 386564 29 100.0 32 ............................. CCCGAAAGGACCACGCCGTGAAGGCTCTCACC 386625 29 100.0 32 ............................. ACTCACCGGCGCCTGGACCAAGTGGGCATCCC 386686 29 96.6 32 .........................C... CAGGCTGTCATCGACGCCGAGGAGCAGCTGCC 386747 29 100.0 32 ............................. AGCACACCTACACCTGGGGCCGGTGCGCGCTC 386808 29 100.0 32 ............................. AAGCGATGGGAAAGACGCAACGTCGAATTCTC 386869 29 96.6 32 ..........T.................. AGCCTGTTCGGCAACCTCGGCATCGTCGGCCT 386930 29 100.0 32 ............................. AGTTCGGGCCGTCGGGCCTTCAGCTTCGCGGC 386991 29 100.0 32 ............................. GGCTCTGAGGGTGGTGGGGTCGTCGATCTCAT 387052 29 100.0 32 ............................. CCCAAGGGCTACGGCCAGATGACGATCGCCAA 387113 29 100.0 32 ............................. TCCTCGTTCTCCTTGGTCACCGGTCCACCTCC 387174 29 100.0 32 ............................. GCCCTGATGCGCAAGGAGAAGGGCAACACGGC 387235 29 86.2 0 ...........A.T..........AC... | G,C [387252,387258] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CTCCGGCCGGGAGAACGAGGAGGAGGCCTGGGGCAGGTTCCGCAAAATGCTCCAGCCGAACAGGCTCGACCGCACCGAGGTGCCGTTCGTCAAGATGCGCTACGACAACACCCGTACCCAGAGCATGAGCAAGGGCGACGCCCGCGGCTTCGCGCCTCTGGAGACTCTCCAGCGGGAACTGGGGCTGCTCGACGGCGCTCCCGGCAGCTTCGTCGAGTGGGAGAACCGGCACGGCGCCGTCTGGCGGGCGGACAGCAACAGCGACGGCCTCGAGCTGGCACACGACGGCACGCGGGACACAGTGGACACCGACCAACTGCAGGCAACGGCCCGCACCAGCGTCCAATGAGCTCTGCCCCGTGCCCGTTGCCCGCAGAGTTTATGCAGAAGCGTAAGGTGAGCCCGATTTACATCACATGCTGCTCATGTCTCATTTGCCGGGTCCTGTGCAAGTCACTGAAAGCATGCCCCTGAGCCCATAGACCAACAGGTCAGACAGT # Right flank : CTGCGGAGATCGGCTTCAGGGGCGGTGGGTCAGTTCACCGGAGCTTCTCGCGCGTCTGCGCGCCGCTGGTGGGCGGCGCGCAGACGGGTGGGGTGTGCTCGGTGCGGGGGCGGTCAGGCCCAGCAGCCGTTGACGGTGGCGGCGAGGCCGTCCATGGCGTCCTTGATGTCGGTCGGGTCGGCCGTCGAGTTGTTCTCGATGAAGGAGAAGATCCGCCAGTCGCCGTCCTCGGTCTTCGTGACACCGCTGAGGGCGATGGCACCGGTGAGGGTGCCGGTCTTGGCCTGGACCTTGCCGACGGCGCACTCGGAGTTGGGGTCGTCGAAGCGGCCCCACTCCGGGCCGAGGCTCGCCCCGGCCTCACCGGCGACCGGCAGGCCCTCCAGGATCGAGCTGAGGGCGGGGGACTCGGTGATCGAGTCGAGGAGCTGCGCGAGGGTGGCGGCCGGGATGCGGTCGTCGCGGGAGAGGCCGCTGCCGTCGTGCATCTCGAAGTTGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //