Array 1 40-189 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKDC01000195.1 Acinetobacter baumannii strain TUM16624 sequence195, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 40 30 100.0 30 .............................. GTCCCGAAATTTCAGTAGGTGGCTCATAGC 100 30 100.0 30 .............................. ATACACCAATCCCGCTTAGAACTTGTAAAT 160 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ============================== ================== 3 30 97.8 30 GTTCATGGCGGCATACGCCATTTAGAAATA # Left flank : TTAGAAAAATCCCGCTTAGAACTTGTAAACAAAATTCTGG # Right flank : AATCTGGTTATCCGATTCCTATTTATTTTGGTTCATG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 34252-38246 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKDC01000026.1 Acinetobacter baumannii strain TUM16624 sequence026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 34252 30 93.3 30 ............................TC ATGGCCTCTGTAAAACTTTCCGACCTAAAG 34312 30 96.7 30 .............................T CCACGCTTTTGACATCACAAAAAGCGCATT 34372 30 100.0 30 .............................. GATAAAGACTCAGCAAAGGTTTTCACATTC 34432 30 93.3 30 ............................TT GTTGCTGAATTGCTTGATTTACTGCATTGA 34492 30 93.3 30 ............................GC TTGTGTGGTGCGCTGTGCTGCAATTGTAGC 34552 30 96.7 30 ............................T. GTAAAGACACAATAGATAATACTTATAGAA 34612 30 96.7 30 .............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 34672 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 34732 30 93.3 30 ............................GT CGGTCGAATGTCTGGGACTTTTTTGTTATA 34792 30 100.0 30 .............................. AGGCATACACCCAGTAGAAGATAGACAAAA 34852 30 96.7 30 .............................T ATATGTGCGTAACCGAGCAAGCTTGTCACG 34912 30 96.7 30 .............................T ACCGAAAGATGACAAAAAGCACCCTAAGGT 34972 30 100.0 30 .............................. GTGAAAAAAGCTGACAGCAAAATAAACTCA 35032 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 35092 30 93.3 30 ............................GT CCAAGTCTTAAAGATGTTCAATGGGCAATG 35152 30 100.0 30 .............................. TCGAATCAAAATATTAAAGAGTTACGTCAT 35212 30 100.0 30 .............................. TTCGTGTTGACCAGGAATTAAAAGACACTT 35272 30 93.3 30 ............................CT CAAAGTATTTAACACGGTTGTTAGCAGGAT 35332 30 93.3 30 ............................TG CAACAGTAGTAGTTCGTGTAGATCAGAAAG 35392 30 93.3 30 ............................TG TTCTAATGTTTCTAACAAACCATACTGAAG 35452 30 96.7 30 ............................C. AAAAAGAGCTTGCATATACAGATTCTAGTA 35512 30 93.3 31 ............................TT GGTGTTGAACAATGCTTAAGTGAAATCACAA 35573 30 96.7 30 ............................T. TATCAATCTTGTTAAGAGAAGCCGCATCAT 35633 30 93.3 30 ............................GT GATGTGTATGTTCTATTAGTGGTGTAAATC 35693 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 35753 30 96.7 30 ............................T. GTCCCGAAATTTCAGTAGGTGGCTCATAGC 35813 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 35873 30 96.7 30 ............................G. CTTGCGATTAACGCCCCCAAAAGCCGGCAA 35933 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 35993 30 96.7 30 ............................T. ATACACCAATCCCGCTTAGAACTTGTAAAT 36053 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 36113 30 96.7 30 .............................T CATCATTGCAGTCTTATAAGAGCCAGGCTG 36173 30 100.0 30 .............................. ACTGCATAGATGACCATTAGAGACATCCCC 36233 30 93.3 30 ............................GT AGTGGGGACATTGTGTACGCTCATGATGTT 36293 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 36353 30 96.7 30 ............................T. CTAACTGTAAAACAGAAGACTTGCCAACTT 36413 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 36473 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 36533 30 93.3 30 ............................TT AGCCGTTTGGACTTTACCAATCTATATTTA 36593 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 36653 30 100.0 30 .............................. TAGAATTAAAACCACGTTGATAATATAGGT 36713 30 96.7 30 ............................G. ATTGCACTTGCTAAGCCAATAATGCCAACT 36773 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 36833 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 36893 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 36953 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 37013 30 100.0 30 .............................. AAGTTTTTTTGACAATCAAGCCGGCAAGTT 37073 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 37134 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 37195 30 96.7 30 ............................T. TTCAGATTGGCTGCGGCCTCACCTGTAGCA 37255 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 37315 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 37375 30 93.3 30 ............................TT GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 37435 30 96.7 30 ............................C. ATGGATTTAAAGATTTCAACCGCTTGGGAG 37495 30 96.7 30 .............................T CATCGAAATTTAGTTCTAATTCTTTAATTT 37555 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 37615 30 93.3 31 ............................CT GAATAAGTGAGATGTCTCTATGAGTTCAATT 37676 30 96.7 30 .............................T TGAATTAATACGGCTTACTGCAATTGGTTG 37736 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 37796 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 37857 30 93.3 30 ............................TT GCTGCCTGCAAACTTGTTTGGGGCTTTATG 37917 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 37977 30 93.3 30 ............................TT TAAAGCTAAATGAGGGTTAAACCTAAGAAA 38037 30 96.7 30 .......T...................... CGTGAACAATTGTTTTAGCTTTGAACATTA 38097 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 38157 30 86.7 30 A......A.........T...........T TTTGATCTTTACTTATTCTCGCTTCAAACA 38217 30 66.7 0 .......A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 67 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //