Array 1 235912-235515 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPMK01000003.1 Thalassococcus profundi strain WRAS1 scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 235911 37 100.0 31 ..................................... CCTTTCCCAGACAGGTCACTTGACCACACGG 235843 37 100.0 32 ..................................... GGGGCGGGCTGGTCTATCAGGGCGAGGATCGC 235774 37 100.0 45 ..................................... TACTGAATTTTGCTTCTTGTTCAGAAGCAACAAGGGTTATTTGGG 235692 37 100.0 32 ..................................... CAGCGCCTCGGCCTTCTCGTGCAGTTCTTGGC 235623 37 100.0 34 ..................................... CCGAGGCCGATGGAGCCCATGGCTTGGAACTGGG 235552 37 81.1 0 ..G..C.GT....A...................C.C. | G [235521] ========== ====== ====== ====== ===================================== ============================================= ================== 6 37 96.9 35 GTAGTGAACCCTTGGCCGCGACACAGCGGATTGAGAC # Left flank : TTCAACAAATTCCAGATCTCAGACCACCCAGAAGCCGGCGTCCTCTTCCATCGGCACGCCGTCACCGTAGACGCGGCTGCGGGCAAGGCCGTCGGCCCCCACCGCGTAGACGCGCAAGCTGTCGCCTGCATCGAGCAAAGCCGACACCCGTTGCGCGACAGCCGCCGCACGCTGCCGGGTCATGCGGCATTCGAAGACTGAGAATTGCACCCTGCTCGCCGCGGCCTCGAGTATCTTGGCCGCCTTGCGACGCTTCTTGTCCTTCGAGATGTCATATGCGAAAACCGTCAGCATTTCGCCCCGTGCCATAGTGCCCCTCCAAAAACCCAATTTGCATCAATTCCCACTTGGAAAACGCCGCAAAATGCTGATTACAATGCGGATTGTTACATATTTTTCCGGCATAATCATGCAAGTTATGCCATCATGGCCAAATTTTGCCTTGCGCCTTGGAAAGTGGCTGAGAAATCCGTTGCGAATCAGAATGCTGCAAGAGATAA # Right flank : AAGGGGCAATCGGAACGAGCTGGCTCATCCGGCGATCAGTAATCCTGAACCGCCGGGGCAAAGTTGGCACGATCAGGATCGAGGACATGCTGGGCAAGCGCCCTTGCCTCCTCGACCAGCCGCGGGCGGCCGGCCATCCGCCGCCCGCCGTGCGGCGATCGCGCCACCCGGTCCATGGCGGCCTCATAACCGCGGATCAGCGCGACCCGGCCGTCACGCGCGATGCGGACCGGATCGTCGCCCTCAAACATCTCTGCACTCAGGTGCCGGTGCAGGAAAAGCGAAACAGCAAGCCCTTCGGTCAGAAGGGCCCGGGGCCCTTCCATCACATCCCAGACGCAGGCGTCGTGATAATCTGCCGATGCGTGCAGCACACCGAACCCCGGATGCAGTCCGACCTTGACGATCGCCGCACGCACGTCACGCTCCAGCATGGCCGTGAGATAATTGATTGCGGCGTTGAGCAGGTCCGAGGCCGGGCGCATACGCCGAAAAGGGAT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTGAACCCTTGGCCGCGACACAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 245381-245914 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPMK01000003.1 Thalassococcus profundi strain WRAS1 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 245381 37 100.0 32 ..................................... GAAAGTGAATTCCCGGTAGGGGATGGCGCCGG 245450 37 100.0 34 ..................................... GCGTCGGGCATGGCGGCAAGGGCGGCGTCGGCCA 245521 37 100.0 35 ..................................... CCGTGCGTTCTCGGCCTCTGCGGCGGCAAGGGCGG 245593 37 100.0 35 ..................................... TCGCCTACAGCCAAGCAGAACAATGAAAGGCAAAC 245665 37 100.0 35 ..................................... CTTTCTTCCTCTTCCTCCTCTTCTTCAGCCGACAG 245737 37 100.0 33 ..................................... CAGACCGGAAGCGGTCAGCGCGAGGCAAAAACA 245807 37 100.0 36 ..................................... CCGGGGTTAGTTGGGTTCAGTCGTCTTTGCGTTCGG 245880 35 89.2 0 ......................G....-..A...-.. | ========== ====== ====== ====== ===================================== ==================================== ================== 8 37 98.7 34 GTGCATCAGACATGGCCGCGAAACAGCGGATTGAGAC # Left flank : CCGTGCACTGGAAGGCCGAGCAGGGCGCCGGGCCCCTGCAGGACCTGTTCGATGCTTTCGGTCAGGAGATCGCTGCGCTGACGGGTTCACCAAGTGCGACGTGGCACAAGAGTCCGGCTATCCAGGCGCTGCTGGAGGCGGCAAGGCCGCGGGGCTGGCGTGATCCCGGCACGACCTATTTACCTTACATGAGCGAAGGCAAACAGGCCAAGGCCTTCGCGGATCTGCGGAAAAAGACCGGGATCGGTGTATCGCGCAACCCGGACGCACGCCGTCCGCCGGGCCGACTTTTGCAGACCTGAGTGCAACTGCGGGGGGAGGGGTAATGCTCCAAAACACCCGATCCTGCTTGGAAATATGATAAGGATATGGCCAGAAAGGGAAAAAATGATAGGGGAACATTGAAGGGAGTTGAGATTGCATTCCGCTGGGCAAATCTGACCTCCGGCTTGGAGGGACCGAAATTTGTGGCTTTTAAAACAAGGCATTGTGGAGGGTAA # Right flank : CCCGCCCCGCGTGCGTTGGCGTGATGCCACGAACGCACGATAGCGGTCTCGCTACATCGTCTGAAATGCGTCAGGCGGCGAACAGATGCTCTTGGAAGGTATGCCGCTTAGAAAACCCGCCAACCCGAGAAGAAACAGCAACGCCGCGGCAAAACCGATCCAGGTCAAATAGCCACGAAGGGTGGTTGTCGCGACCTTACAGAACAGCGCGCTGGCGCCAAGGGTGGTCAAAAGCAGGGTTGCGGCAAAGACCATCGCGTCGAAGGCCAAATTCGCACAGGTCAGCGGTGTGAACCGAGATACGAGGGAAAAGAGCTCCGCCTCTTCATCGAACAGCACGTTCATGCCGGTCAGCGCCGCGGCGACGCCGATCACAGCGGCGACCGTCGCGACCTCGGTCAGGTTGTTCGCCGCATCTGTCGCCGCCCGCTGTTCTTCAGCTCGTGCCAGATCGGCAGCGCTGTCGAGCTCGGCCTTGATCTCGTAGTAGCGCGCGTCGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCATCAGACATGGCCGCGAAACAGCGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //