Array 1 121474-122739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGJY010000010.1 Clostridium tertium strain DSM 2485 Ga0454102_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 121474 30 100.0 34 .............................. ATAGTAGAAATATCATAATTCAATGGCTCTTGAA 121538 30 100.0 36 .............................. TAAAAAGAAAAAAACCAATTAGGCAAATTGTAACCA 121604 30 100.0 36 .............................. ACTATTGCTATAGCTTGTGCTTCTTTTTGCTTATAG 121670 30 100.0 34 .............................. CCACGTATTGAAATTTTTACAAAATCACCAGGAA 121734 30 100.0 37 .............................. ATATCTTTTCTAATTTGATTTACATTTACTTTTCCTT 121801 30 100.0 36 .............................. GTAGCAACACAAACCAAAGAAGAAATAGAGCAACAT 121867 30 100.0 36 .............................. TTCATTTTCAAAACAATTTCTTCGAATGCTTTCATA 121933 30 96.7 34 ............T................. TGACTGCTATGGGATTGGAATGTTTCTCGCCTAG 121997 30 100.0 30 .............................. TAGTTTATATAATTCTTTTTGTTGGGATAA 122057 30 80.0 37 TGGAG.G....................... TAAGTAGTAGCTTTTTTTTCTATCTATTCCATAACTT 122124 30 100.0 36 .............................. GGTGAATTTAAAACTTTAGTTGAAGCTTTAGGGGGA 122190 30 100.0 36 .............................. ACAATTGTTTTATAATCATTAATTTTTAAAATATTA 122256 30 100.0 36 .............................. TGATTTGGACAGAATTGACTTAGTAAAAGAATTAGG 122322 30 100.0 34 .............................. GATGTAAGATTTAATCCAGCTTTAAATCGTATAA 122386 30 100.0 35 .............................. CCTTCCTACTCTTTACCAATCCTAGATTTACCTAC 122451 30 100.0 37 .............................. AATTCAAGAAGATAAGACTCAAAAATATGTGCCTAGT 122518 30 100.0 36 .............................. TCGGAAAAATAAGTATCAAAGTTTTGTAAAGAATTT 122584 30 96.7 37 ....................T......... TTAAATACATTAACTACTCCACCGTTTGAACACGGTA 122651 30 93.3 28 ................G...........C. CCTGTTATTTATCTGCCTTTCACATCCC Deletion [122709] 122709 30 76.7 0 C....GG.....G..T...........T.G | A [122711] ========== ====== ====== ====== ============================== ===================================== ================== 20 30 97.2 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAGGGTGAAAATATTATAATAGGGACACATGGAAATATTATTATTCTTATAATGAATTACTGTGACAAAAAATATAATTATATTTTTTGAAAAATTTAAGTATGCCAGATATTTATAAATTGACTTTTCAATATGAAGAGCTCTCGAGTGTTGATCATATTTGGCATTAAATTATAAAATACAATAGAAGTACTTGCTTGATTAATGATGATAAAATATAAATTTAATTTTTCTAATAAATAGATTTATCTTAATATTATAAAGGGGGTCGCGTAACGCGACGTCCTTTATTTTATGGGAATTATAAAAAATATATTAAAAATTTTTACCAAGCTATTATTTTATAAAGTATTTAGAAAATAAGTTATATTGCCAGTTTAGGCTATAAATTATATAAAGCTTTTTTTATTTAAGTAAAGCTGGTAAAAAGTTTGAAAAGTGAGATGTTTACAAAGGTTTTATAGGCATGTATAATTTAAGAAAGGCTTAAAATCAATG # Right flank : GATAGTCTTAACGGCAGCTATAATCATCATTATTAATATTTAAAACATAAGATTCGAATATGAAATATAATTAATAATTTAAAATGTTAGAATTTGAATAATAGATATATAAAGCATCTGTAATTGATAATTATGGGTGCTTTTAATTATTTTTATTACATTTTTATATTATTTAAAATATATGACGAAGCTATTAATAATGAAGAAGAAGGAGAAGAGCTATGAAAGTGAAAAAGAGATATAAAGAAAAAGATAAAATAAATACAGAATTAACTTTAGTTAACATAATAAATAATTATAATAAAGTCAAAATGAAAAGTGAAATGAAATAAAATAACTAAAAGATACATTATAATTTAGTTAATAGTAACATTTTATGTTTTTAAATTATATTTTAAAAAATATTAATTATTAACTTTGACATAGTTCTACATAATTGTTAATATTTACAATTATGTAGAATGGATGTAGAATTATTTTAGGAGGTGATGACATGAAAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 131954-132572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGJY010000010.1 Clostridium tertium strain DSM 2485 Ga0454102_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 131954 30 100.0 36 .............................. ACGGTTTGATTAATACTATTAAAAGGAAAATCTTGA 132020 30 100.0 35 .............................. AATCTTTTATATCATCATGTAAAGAAACAGAAAAA 132085 30 100.0 34 .............................. TATAAATAACCTTCAATGCTCTTTAATAGTTCTT 132149 30 100.0 35 .............................. ACAAGTATGTTGCCCTAAGTGTGGAAGTTCTCAAT 132214 30 100.0 35 .............................. GTAATAAAGAAATAAATAATGTAATCAAGGATGAA 132279 30 100.0 36 .............................. TAAGGTACTTTCTATGACTTTAACATTTTGCTTAAT 132345 30 100.0 36 .............................. GCTAATGTCGCTAAATCATCTAAAGGAGTGTCACTA 132411 30 100.0 36 .............................. AATAGTCCCACTTCTCCTTTCATAATCTGCAATAAA 132477 30 100.0 36 .............................. TTGCCCCTCTTAAATGAGGGGTATTAATAAGTAAAT 132543 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAGTTTAAAGGATGGTATGTAGAATGGGTAAAAATATCAACTATAACTATGCTTTTTTATTTTATGATATAAAAGAAGAGAGAGTTCAAAAAGTTTTTAAAGTATGTAAAAAATATCTATCACATTTTCAAAAATCAGTATTTAGAGGAGAAATAACACCATCAAAACTTATATTATTAAAGAAAGATTTAAATAATGTTATCGATAAAACAGAAGATTTCATTTGCATAGTAAAACTTATTAATGGAGACGTATTTGGAGAAGAAATACTAGGAGTTCAAAGTAATAATACCGGTGAAGATTTAATAATATAATTTACCAGGATGTATTTCTATTAAAATCTTTATAAGCGTTGAAAATACAGGCTTTCATAGGTTTTTAAAATAAGTTTGTATTTTTTTACATTAGCTTGGTAAATTATTGATAGAAGTAAGAGGAAATAAGGTTTTCAAGAAATTTTATTAAATAGAAAAGTCACATTTTCGAAGG # Right flank : TAAATACATCTGTATTAACAAGGATAGTTGGTAATAAGATCAACATTAATTAAATTTGTAGTTACTATACAGAATATCAATAGCAACTACAATTAAATTAGGGCTATATATTTGAATTGATAAATATAAAAATACAAGTGTATAACGAAACGTGATAGCCTTAAAATTATAAATAAATTACATTATTTTCCAGGTAATATTTTTATAATTATTAGAAAAATATTTAAAATAATTAAAAATTTATTGTAATCGAACCCAATAGATTGACAAGAATGCTAAATAGTTTTATAATTAGTTAGAAGTCTAACAAAAGCGTGGGTGTAATTAATGAGTGAAATAAAACACATTGGAAGAAAAATTAATATACTGTCTCATAAAATTAAGAGAAGAATAGGTAAAGTATCATTAGAATATGGGATAAGCAGTATGCAAGCAAAAATTCTAGGGTATATATTTCATCAAGCACCTAAGAGAGACATATTTCAAAAAACAATTGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //