Array 1 84489-85109 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKZU01000018.1 Algoriphagus ratkowskyi strain DSM 22686 LV84DRAFT_scaffold00018.18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 84489 30 100.0 36 .............................. AGATTCTAACGATTACTACCAACGCACCCGACCAGC 84555 30 100.0 35 .............................. TGTAGTGGATGCAAGAACTTGCTTGCCTAAAGGCC 84620 30 100.0 36 .............................. TAGTGGGCTCAGGGTACTATACCGGGGGATTTACTG 84686 30 100.0 36 .............................. TCAAAATGTATAACAGGGACCTCCAGTATATTCTCA 84752 30 100.0 36 .............................. CAGGGGACCCCTACGCAGACGAAGCAGCACTCTTCG 84818 30 100.0 36 .............................. ATGTTTACACCAGCGGAAAAAACTTTGCAGGACAAG 84884 30 100.0 36 .............................. TGAGATGAGCGCAGCTATTACGCTGTCAGTCGAAGC 84950 30 100.0 35 .............................. TTGTCTCAAGCAGGGCTGAAACCTAACCGACTAAC 85015 30 100.0 35 .............................. CTGAGTCATTTATGAACAGGATTAAACTTAGATCT 85080 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 100.0 36 CCTTCAATCGCACCTTATCGGAATTGAAAC # Left flank : AACCATTCAAAATCTGGTGGTAATATGTATGTGATCTTGGTTTATGATATGGGAGAGAAGAGAGTAGGGAAAATGCTCAAGTTATGTCGGCAATACCTCAATTGGATTCAAAACTCTGTTTTTGAAGGGGAGATTACAGATGTAAAACTCAAGGAGTTGCTGATTAATACCAAAAAATTAATGCGGCAAGAGGAAGATAGTATCATTATCTTCAAAAGTCGGGATCAGAAGTGGCTTGAAAAAGAAGTTTATGGAAAAGAGAAAAACAGTCTTGACAACTTCCTTTAAGGTAATTGATTGTCGATAAGATGAAATTCTCAATAGAGATCAGCTAAATTTTGGAAGAAAATACAGAAATCCTTGAATACTCGCTGCAAAAGATGTTGTCGAACCCCAGGGTAAAATCGGGTACTTCACATCGACAACTTTTCCTTCTAAAAATTAGTAGAAAAACCTTCTTATTTTTAAAATTTGCCCTATTTTTGACTTTGGCCGAACGG # Right flank : TTACTTCAAAGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATCGCACCTTATCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 6-889 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKZU01000006.1 Algoriphagus ratkowskyi strain DSM 22686 LV84DRAFT_scaffold00006.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 35 .............................. GGCAATTCCAGCGCATTCAACCAGCGCGCAAACGA 71 30 100.0 37 .............................. AAACTAAGGAAGACACATGAGATACCTATGGACTCCA 138 30 100.0 36 .............................. TGAATTTGAAGCTATCCAAAAGGCAATTTTAGAAAA 204 30 100.0 36 .............................. CGAACTATCCATAGCCAAAGCCAAGATGTACAAGAT 270 30 100.0 35 .............................. ATAATCAGGCAAATTGTTACTAAATTGGCATAATA 335 30 100.0 35 .............................. ATGTAATCAGCGGAAATGATGGCCTTCTTGAAGTA 400 30 100.0 36 .............................. GTAACTCCAAAGATTCTACACCATCACGGCTCCATA 466 30 100.0 35 .............................. TCGATATCCGAATCGAGCGTGAAAACAAGGTTGTC 531 30 96.7 36 T............................. TCAGGTCAGGATAATCATAGAAAAAGAACTTATAGC 597 30 100.0 36 .............................. GATAAGAACCTGAACGGGAAAGTAGATAGCTGGGAG 663 30 100.0 36 .............................. TCGAAGGAGGCGTCGATGAGGGGGAAGAGGGAGAGG 729 30 93.3 35 .............A....T........... TCATCCAAGTGGATCAAGAACGATCAGCCCTATAC 794 30 93.3 36 ..................TA.......... TGGGATCATCGGAAAGCTGGAGCATGAGATGTCTGA 860 30 80.0 0 .................AT..C...T.G.T | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 97.4 36 CCTTCAATCGCACCTTATCGGAATTGAAAC # Left flank : AGTGTC # Right flank : TTATTAAATTGAATTTTGCCAGCTTCAAGAATAAGTCTCAAGGTGTCAATACTAGTGTAGTGATAAATCATAGAGTTTTTCTATCAAAATTCAGAACTTTCAAAGATTTTTACCAATCTTAATTTAGTCGATATATAATTTACGGCAGATGAAATATACCCTGTATAGGGTATATTTAAGATTGGAATTATCATTTTCTTAGCAGAAAATTAACGGTATTGTCAGAAGAGTAGCTTCCCTTTCTAAGGAAATTAGGAAATTTTCAAATCAAAGTTTAACCCTTAAAACCGAATGAAGGTCTTATTTACCTCAGTGATTTTCTTATTACTTCTATTCGTAAATACAAGATCCTTTGCTGCTGAGATCTATGAAGTCACGAGTGATGTTTTTGTCAGATCAGGAATAGGAACAAGCTATGAGGCAATAGGCATAGCGAAAGCGGGTGACCAAATTAATGTTCTTGATAAGTCAAACCCAAACTGGTTTAGGGTAGAATTTGA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:0, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATCGCACCTTATCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //