Array 1 390514-392661 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ034019.1 Lactobacillus melliventris strain Hma8 Hma8_scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 390514 36 100.0 30 .................................... AATTTGTTGTGATGATAATAAGAGTGAACT 390580 36 100.0 30 .................................... AATCGTTCGAATATTACTGATAACATGGTA 390646 36 100.0 30 .................................... GAACAGTTAAAACATGACTACGACCAATAT 390712 36 100.0 30 .................................... TTCATGTTCACGTAAAATATTATGCATATA 390778 36 100.0 30 .................................... CGACTATCTATTACTTCTTCACCTTTAAAT 390844 36 100.0 30 .................................... GACGCGAGGAATTATCAATTCTCGCAGGAT 390910 36 100.0 30 .................................... ACCCAAGAGATACTAAAGGGCGCAGGTATT 390976 36 100.0 30 .................................... TTACGACTCAATCAGAAAAGACGGAATTCA 391042 36 100.0 30 .................................... TTAATGAGGTGATTTTATGAACACAGACGA 391108 36 100.0 30 .................................... GCTGAATACGAAACGGCAATGCGTGCCAGA 391174 36 100.0 30 .................................... ATCAGACAGCAGGCATTCCTTCCGTCTTTC 391240 36 100.0 30 .................................... AAGCCGTATAGTCAGATAACTCTGGTACCC 391306 36 100.0 30 .................................... CGATTAATCTAATGGCACTGATAACGATTG 391372 36 100.0 30 .................................... AAAACATTGAAGGATATGTGCCAATGTACT 391438 36 100.0 30 .................................... GTAATTCAATATGCCCTTGCTTTAAAATAG 391504 36 100.0 30 .................................... ATAATAAAGCCGACAAGAAAGGCGAACTCA 391570 36 100.0 30 .................................... TCGTGAAGATACTAGATGCATGTTGTGGCT 391636 36 100.0 30 .................................... ATGGCCTGTGTTAGTCTACGAAGATCACGT 391702 36 100.0 30 .................................... AAAGATTTGTTGCATGATGCAATTCAAGAA 391768 36 100.0 30 .................................... TTTTAGGCAAGTTGTCAAGTCTTGCACATG 391834 36 100.0 30 .................................... TAAAAATGAAAGAATTAGAGATATTAGATA 391900 36 100.0 30 .................................... TAAGCATGCCAAATTTGAATGCATGCAAGC 391966 36 100.0 30 .................................... ATGCAGCAGAGCATATTGTCACCTTCATGC 392032 36 100.0 30 .................................... TCCATGGTGTCGTAAACGTCGCGTATTTGA 392098 36 100.0 30 .................................... ATTTAAATACCTATGATAACAAGCTTATGG 392164 36 100.0 30 .................................... GTGGCCGACTTGATAGTTTGAAGGCTTACG 392230 36 100.0 30 .................................... TTGTCCTTTTTAAGCTGTTCAGCATCTGCT 392296 36 100.0 30 .................................... ATATCTGTTTGTTTATTATAGTTGGAGTTG 392362 36 100.0 30 .................................... TTATCACCTGCATGAATCAGATGTGGTGGA 392428 36 100.0 30 .................................... CGCGATTGAAATTGAACCGTAGGGGGTTTC 392494 36 100.0 30 .................................... GTATTTTCAGCGTCTTCAGGTGACATATGG 392560 36 100.0 30 .................................... AGGGGTTTAGAATATATTCTACCTTTGACT 392626 36 94.4 0 ..............C.................A... | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.8 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGGCGATATCACTAAAAAGTATATGCCGCACATTGTGAACAATTATCTGAAAAGCTTGGATGAAGAAAATCGTGATAAGCTAATTAGATCGCTTTATAGTTTAGAGTCAATCTTACAGGATTCACTTTTACTTGAGGATTTACCATTAGCGATTAATTTTGATGAAGATTTAAAGAAACTCCTTAAATATACAGAAATTCATTTAGATAAAGCTTTATTAATTCATCCATATGGTATAATAGAAACAGTTTTAAAAATTTACCAAACATGTGATTTAAAAACTATTCCTGTTATTTGTAATGTAGCTCATTACTTGGAAAAAGAGGAATGGCAAGAGTTAGCTAGTCTTGTCACAGAAATGAATTTAATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTAGCAACACCTAAAGACATACCTTTTTATTTTATTGATAAGGATCTAATCGATTGGTATTAACAACAATATTAAAATTATATTATAAAATATCG # Right flank : CTAGCAAGTCCGCAAGGCGTTATAATGTTGTGAAAATGAGCAACTTGTTTAAAGTAAATAAAAGATTAATGCTGATTATGCAGTTACCACTAATAGTGATGAACATACCATTACCTTAAGAGAAGTTAAGACTAACAAGAAAGTTATTAAAACGATCAGAAAATTAAAGCACTAAAGAACGCCTCTTTATTAAGTCCTGCTGATAATAAAAAGATAAGTAGTAACAGATAATAAATCTGCTAATTAATCACACATGATAATAGCGACAAAATAGACAGGTATATTTTATTTCCTTATATGTGACTTCCACTATGCAGATATAAACTAAACTCCCATTAAAAAGGTAAGCTTATTCATATGAAAAACATACTAAAAAGTAGAAACAACAGACTATATCTTCTATCAGTAATTACTGATAACTTTGGCAGTGCGTTAATGGCCTTTGTGTTACCATTGATGGTACTTGATATCACTAAAAATGGAATTCATTTGTCAATAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //