Array 1 109825-104082 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCWF01000006.1 Macrococcus bovicus strain ATCC 51825 NODE_6_length_133488_cov_86.2028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 109824 36 100.0 29 .................................... TCTCGTGAGCTGTACGACATTCCTTTACC 109759 36 100.0 30 .................................... ACAACGGGGCGGAATGATTGCAACGGGTAT 109693 36 100.0 30 .................................... GAAATCGCAAAGAGAGTGAGCGCTGCTGCT 109627 36 100.0 30 .................................... TCACAGTTCAACAGGTGCTACCACCAGAAC 109561 36 100.0 29 .................................... CTGACATTGTATCGCTCGACACGACCAAC 109496 36 100.0 30 .................................... CACCTTTACTTATACCTTACGCAAAACAGA 109430 36 100.0 29 .................................... TTGTTCGTTGTTGTGATATCGTTTCCTGC 109365 36 100.0 30 .................................... ATGCTGTCCCACGCTTCGAACGCTTCGCGG 109299 36 100.0 29 .................................... AATTGTGGAGAACTAGCTGATGAAAGAGC 109234 36 100.0 30 .................................... AAGGTCAATACTATTACGAGAAACCGACTT 109168 36 100.0 30 .................................... TGATAAGCCGTTGTTGATGACATACGGCGT 109102 36 100.0 29 .................................... TAAGTATATTGCCTGAAGTAGTAGCGTGA 109037 36 100.0 30 .................................... AGATGAACTACTGAGATTAAAACAAGTCAG 108971 36 100.0 29 .................................... TCATTCGAGAATCAGAACGCACCAGCACA 108906 36 100.0 30 .................................... TGAATGGAATCAATCTGCACCACATGGAGC 108840 36 100.0 29 .................................... TACCACTCCAGCTTACTTGTTAGATCTTC 108775 36 100.0 30 .................................... TGTTTTAGCACAAGTCGAGGACAGCAAACT 108709 36 100.0 29 .................................... TGCCTTGCTCGTTCTTATAAGCACGGTTC 108644 36 100.0 30 .................................... CGCCGAAGAGTCAGCAGACCTGAAAGAAGT 108578 36 100.0 29 .................................... ACTTTCACACTTACATCAACTTGTCCGCC 108513 36 100.0 29 .................................... GAATTTATGGGAGAGTCAGGCAGCAATGT 108448 36 100.0 29 .................................... GCGGCAGCTATTCAGAACGGCACTGACGT 108383 36 100.0 29 .................................... GTAACAACCTGCAAGACTGCTGCGCCGAT 108318 36 100.0 30 .................................... AGTGGCCATACCATTATGAACTCGGTCGCC 108252 36 100.0 29 .................................... GACAGAAGAAAACATCAGAGCGATGATGC 108187 36 100.0 30 .................................... GAAGCTAGACGCTGCCGAGTACGGATATAT 108121 36 100.0 29 .................................... GTTTCATCTCAAACTATCACTTCCTATCA 108056 36 100.0 30 .................................... AGGTTATGTAGGCTTCCTCACAGGGCGCAG 107990 36 100.0 30 .................................... TGAATACCTGACCAGTATCAAGAATCAGGG 107924 36 100.0 29 .................................... CCATCGGACAGATTTTCAGTTCGTGAAGG 107859 36 100.0 29 .................................... ACGTGGGCTGAACTGAAGAAGCGTGAGGT 107794 36 100.0 29 .................................... CTTTCAACTGATTGGCTATGACGGCCGGC 107729 36 100.0 30 .................................... TCCATTGATCACAGAAATCAATCATCACTT 107663 36 100.0 29 .................................... TTTCATCTGTTAAATGTTTCTCAGAAAGT 107598 36 100.0 30 .................................... AAGCAGATGAACTTAAAGAGCAGCATACGC 107532 36 100.0 30 .................................... GAGGATATCAACTTCAATTTCATAAGGGAC 107466 36 100.0 30 .................................... GCTTTTATCTGGACTATGGCACAAGTACAG 107400 36 100.0 29 .................................... GACATCCGCCACAATTCCTGCGCCTGTGA 107335 36 100.0 30 .................................... CAGAAGAACGGATTGTTGATGCAGGAGCTC 107269 36 100.0 29 .................................... GAATTACCGGATATCCCGACGGTGTCGCC 107204 36 100.0 30 .................................... CTTAAGTTCTTTAGCTTGTCCTGGGAATAC 107138 36 100.0 30 .................................... TGAGTTTGGAGATGGTGATATCAGAGCAGC 107072 36 100.0 30 .................................... GTTCCATAAAAAGAACATATATTCGCATGA 107006 36 100.0 30 .................................... GTTGTAAGTTCAGCAAGCGTCGACTTAGAC 106940 36 100.0 30 .................................... TATCATATGATTGATTAAAAGTTTGTTCAT 106874 36 100.0 29 .................................... TGGGGATCTAACTGGTCAAGCGTCGCAAC 106809 36 100.0 29 .................................... TCAATGTGTGCTGCGATGGTTTGTACTTC 106744 36 100.0 30 .................................... AATTAGCCAAACAAGCAGCAGAACGGTACT 106678 36 100.0 29 .................................... CATTATTAATTTCATCAGATATTGCAAGA 106613 36 100.0 30 .................................... GTCGACTGCGGTAAGGTGGACTCTGCTGAT 106547 36 100.0 29 .................................... TGTCCCAGCGACCGAGTGATGAGCAGTGT 106482 36 100.0 30 .................................... GAAGAAGACATGTGTCAGGTGTGTTGATTT 106416 36 100.0 29 .................................... GAATCTCTACCGGAGGATGCACGACTTGC 106351 36 100.0 30 .................................... TGATGGCTCTTGGTATGTTTAATTACTTCC 106285 36 100.0 29 .................................... AAAAAAGTTGAGGAAACTGCAAAAGACGC 106220 36 100.0 30 .................................... ACCGCCTTTGCCAAATCGTCAACATTGATA 106154 36 100.0 30 .................................... TGTTGCACGCAGGAAGACTTGGAAGGCATC 106088 36 100.0 30 .................................... TCCTTGCGTCCAAGCCTTGCAGCGTATTTC 106022 36 100.0 30 .................................... TGTGAGAACACCATCAAGGAACAGCAGGAA 105956 36 100.0 30 .................................... GATTATCCTATCGTGCTATATAGACACACC 105890 36 100.0 30 .................................... AAAGGCTCGAACGAATGGGTGCATTTAGAT 105824 36 100.0 30 .................................... CTACTTCTTCATCTACCTGCTATGCATCAC 105758 36 100.0 30 .................................... TGCAGTGACATGCTTGACCATCAGTCTTGT 105692 36 100.0 30 .................................... TATCCTGGTCACGAATATCCCTGGCACGTA 105626 36 100.0 29 .................................... TCTCTACAAGTTTTTTATTTCGTTTTTCC 105561 36 100.0 29 .................................... AAATAAAAGATTTTAGGTTTATGGATCAA 105496 36 100.0 29 .................................... AAATAAAAGATTTTAGGTTTATGGATCAA 105431 36 100.0 30 .................................... CCGCTTCTTTACCAACTAACTGTGACAAGT 105365 36 100.0 30 .................................... TTCTATGTTACGGATTCTGGCATCTAAATA 105299 36 100.0 29 .................................... AATTTAGGAAGTCAGCTTCTCGCTCGCCC 105234 36 100.0 30 .................................... CGCAATATCAGATGACAACAGACTATGTGA 105168 36 100.0 30 .................................... ACCTGTGCAGTCATCCCATCTGATTTTTGC 105102 36 100.0 30 .................................... GCAAACAGCAGAGAATACAATCACTTCAAC 105036 36 100.0 29 .................................... ATAATGGTGAATTTGATGAAGTGACCAAC 104971 36 100.0 30 .................................... GTTGATGACCTCAACCATTCCAGTTGCACC 104905 36 100.0 30 .................................... AATTGAAGTTGATACCCTCTATATCCAGTT 104839 36 100.0 29 .................................... AAAGGCGTACAGGTAGAACTGGAATATAT 104774 36 100.0 30 .................................... AGTGACACATTGCGGATTACTATGTCAAAT 104708 36 100.0 29 .................................... TGTCGACAAATGAGGTCAACGGCGCCTTT 104643 36 100.0 30 .................................... GGCGGATTCCCTGCGCGTCGTTGTTCTGCT 104577 36 100.0 30 .................................... CTATCGCAAGCAGAAAAGGTGGTTAGACGA 104511 36 100.0 29 .................................... ACATTCAAAGGCTTGTAGCTTTCCTCTGT 104446 36 100.0 29 .................................... ATTTTCTACCGATAGGAACAAGACGCACA 104381 36 100.0 30 .................................... CACGAAGCTATGAAAACAATGAGGGCCGTA 104315 36 100.0 30 .................................... CACTCTCTCAGCTATGAAATCCGGATTACG 104249 36 100.0 30 .................................... GTTACGGTACTTTGCACATTCCCCGCATGT 104183 36 100.0 30 .................................... AAATTATACTGATTAATCGGTGCAACGTTA 104117 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ============================== ================== 88 36 100.0 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : GTTGTTTTGTATTGATATACATAACGATTTTAGTAATTTAAATGCGATACAAGCTCGAAAAGCTTGTATCGATTTGTTGAAAGATGAGAAAAAAGAAAATATCTTATTCTTATTGTTTCCGGAGGCAAATTTAGGTAGCAGTGATTTCAAAGCATTTATTGATTTAATAAGACGTTATGATATGACAACAATAGTCGTAACGAATCATCCTTATTTTATGATAGAAACGGATAACTTAGCACTGAGTAAACGTAATATGACATTATATGATTTAAATCAGGTAAGAGAAGAATTTAAATTAATGTTTCCAGCTGATGAACCAGACGAATGTATCATTCGACAAATTGCTATAAATGAATTTAGTAAGAACTACTTCATTAAAGATGAACGTTATATCAAATTTATTAATGAATATTAATTGTGTATAATTAAATTAACTATAAAAAAGTTTTGCTATCATTATAAAGAGTAGAATATAACCGATAGAATCGTTATTTGAG # Right flank : ATTGGTTCAAACAGTCTGTTAGAATTTTTAGTAATGGGTGCGGATGAATACGTCAATTGAGTAAACAAGCACCCCTCCTTCAATCTTTATCAAACATAATAGTTAGGCTAGTATAAAGATATCTAGTAGTAACTTGTAATTGATTGAAATTCAAAAGGTGGTAGAAGCGGCATTTAAAGATGAAGAGATGAGTGATCATACGGAGCAAGAGCTGATTATGAAGATTAAAGAGTCGGATGCTTACATCCCGGCATTGTCTCTCGTTGCTGTAGATCATACGAAAATTGTCGGGCATATAATGATGTCTAAGATACAGGTTATGGATGGACAGGCGCATCATCATGCGCTTGCACTAGCACCTTTATCTGTTCTGCCTGCCTATCAGCATCAAGGGATTGGCAGTCAGCTTATCCGTCAGGCTGTTGACATGGCTGGAAGGGCAGACTATTCATCCATTATAGTGCTGGGGCATCATACTTATTATCCGAAGTTCGGCTTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //